RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 MS4A3Q96HJ5 214 aa11.07□□□□□ -0.64
CHD8-212ENST00000557329 ZBTB47Q9UFB7 747 aaPredicted RBP11.07□□□□□ -0.64
CHD8-212ENST00000557329 ATMINO43313 823 aaPredicted RBP11.03□□□□□ -0.64
CHD8-212ENST00000557329 C7P10643 843 aa11.02□□□□□ -0.65
CHD8-212ENST00000557329 SLC39A7Q92504 469 aa11.02□□□□□ -0.65
CHD8-212ENST00000557329 MIER1Q8N108 512 aa11.01□□□□□ -0.65
CHD8-212ENST00000557329 PLCD3Q8N3E9 789 aa11.01□□□□□ -0.65
CHD8-212ENST00000557329 TSPYL2Q9H2G4 693 aaPredicted RBP11.01□□□□□ -0.65
CHD8-212ENST00000557329 CCDC61Q9Y6R9 512 aa11.01□□□□□ -0.65
CHD8-212ENST00000557329 VASPP50552 380 aaPredicted RBP11□□□□□ -0.65
CHD8-212ENST00000557329 METRNQ9UJH8 293 aa11□□□□□ -0.65
CHD8-212ENST00000557329 KIF12Q96FN5 646 aa10.96□□□□□ -0.65
CHD8-212ENST00000557329 PLSCR2Q9NRY7 297 aa10.94□□□□□ -0.66
CHD8-212ENST00000557329 MAMSTRQ6ZN01 415 aa10.93□□□□□ -0.66
CHD8-212ENST00000557329 POTEJP0CG39 1038 aa10.91□□□□□ -0.66
CHD8-212ENST00000557329 ATN1P54259 1190 aaPredicted RBP10.91□□□□□ -0.66
CHD8-212ENST00000557329 POTEMA6NI47 508 aa10.88□□□□□ -0.67
CHD8-212ENST00000557329 TIE1P35590 1138 aa10.87□□□□□ -0.67
CHD8-212ENST00000557329 RASEFQ8IZ41 740 aa10.87□□□□□ -0.67
CHD8-212ENST00000557329 BMP2KQ9NSY1 1161 aaPredicted RBP10.87□□□□□ -0.67
CHD8-212ENST00000557329 MAP3K13O43283 966 aa10.86□□□□□ -0.67
CHD8-212ENST00000557329 POTEGQ6S5H5 508 aa10.86□□□□□ -0.67
CHD8-212ENST00000557329 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
CHD8-212ENST00000557329 TRPC6Q9Y210 931 aa10.83□□□□□ -0.68
CHD8-212ENST00000557329 SCUBE2Q9NQ36 999 aa10.82□□□□□ -0.68
CHD8-212ENST00000557329 POTEFA5A3E0 1075 aa10.81□□□□□ -0.68
CHD8-212ENST00000557329 SGIP1Q9BQI5 828 aa10.81□□□□□ -0.68
CHD8-212ENST00000557329 PCDH10Q9P2E7 1040 aa10.81□□□□□ -0.68
CHD8-212ENST00000557329 SPOCK2Q92563 424 aa10.78□□□□□ -0.68
CHD8-212ENST00000557329 TTLL13PA6NNM8 815 aa10.77□□□□□ -0.69
CHD8-212ENST00000557329 IFNLR1Q8IU57 520 aaPredicted RBP10.76□□□□□ -0.69
CHD8-212ENST00000557329 NUBP1P53384 320 aa10.75□□□□□ -0.69
CHD8-212ENST00000557329 IER5LQ5T953 404 aa10.73□□□□□ -0.69
CHD8-212ENST00000557329 LCE2DQ5TA82 110 aaPredicted RBP10.73□□□□□ -0.69
CHD8-212ENST00000557329 PCDHB13Q9Y5F0 798 aa10.72□□□□□ -0.69
CHD8-212ENST00000557329 SEC24BO95487 1268 aa10.71□□□□□ -0.69
CHD8-212ENST00000557329 GSE1Q14687 1217 aa10.71□□□□□ -0.69
CHD8-212ENST00000557329 FAM212AQ96EL1 285 aa10.71□□□□□ -0.69
CHD8-212ENST00000557329 COLQQ9Y215 455 aaPredicted RBP10.71□□□□□ -0.69
CHD8-212ENST00000557329 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
CHD8-212ENST00000557329 TRIM35Q9UPQ4 493 aa10.69□□□□□ -0.7
CHD8-212ENST00000557329 IFNL1Q8IU54 200 aa10.66□□□□□ -0.7
CHD8-212ENST00000557329 TRIM41Q8WV44 630 aa10.66□□□□□ -0.7
CHD8-212ENST00000557329 DCAF8Q5TAQ9 597 aa10.62□□□□□ -0.71
CHD8-212ENST00000557329 TMEM106CQ9BVX2 250 aa10.61□□□□□ -0.71
CHD8-212ENST00000557329 PLCG2P16885 1265 aa10.56□□□□□ -0.72
CHD8-212ENST00000557329 CIZ1Q9ULV3 898 aaPredicted RBP10.56□□□□□ -0.72
CHD8-212ENST00000557329 CHRM1P11229 460 aaPredicted RBP10.54□□□□□ -0.72
CHD8-212ENST00000557329 IRX5P78411 483 aaPredicted RBP10.54□□□□□ -0.72
CHD8-212ENST00000557329 AMER1Q5JTC6 1135 aaPredicted RBP10.54□□□□□ -0.72
CHD8-212ENST00000557329 SLAIN1Q8ND83 568 aa10.53□□□□□ -0.72
CHD8-212ENST00000557329 PYGBP11216 843 aa10.49□□□□□ -0.73
CHD8-212ENST00000557329 OCEL1Q9H607 264 aa10.49□□□□□ -0.73
CHD8-212ENST00000557329 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
CHD8-212ENST00000557329 CDAN1Q8IWY9 1227 aa10.48□□□□□ -0.73
CHD8-212ENST00000557329 ST18O60284 1047 aa10.47□□□□□ -0.73
CHD8-212ENST00000557329 PCDHB8Q9UN66 801 aa10.45□□□□□ -0.74
CHD8-212ENST00000557329 ZNF467Q7Z7K2 595 aaPredicted RBP10.44□□□□□ -0.74
CHD8-212ENST00000557329 ECM2O94769 699 aaPredicted RBP10.41□□□□□ -0.74
CHD8-212ENST00000557329 SNPHO15079 494 aa10.4□□□□□ -0.74
CHD8-212ENST00000557329 TMEM121BQ9BXQ6 578 aaPredicted RBP10.4□□□□□ -0.74
CHD8-212ENST00000557329 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.4□□□□□ -0.74
CHD8-212ENST00000557329 PKD2Q13563 968 aa10.37□□□□□ -0.75
CHD8-212ENST00000557329 PDCD7Q8N8D1 485 aaKnown RBP10.35□□□□□ -0.75
CHD8-212ENST00000557329 RIOK3O14730 519 aaKnown RBP10.33□□□□□ -0.76
CHD8-212ENST00000557329 GOLGA2Q08379 1002 aa10.32□□□□□ -0.76
CHD8-212ENST00000557329 MKRN3Q13064 507 aaKnown RBP10.32□□□□□ -0.76
CHD8-212ENST00000557329 L3MBTL3Q96JM7 780 aaPredicted RBP10.32□□□□□ -0.76
CHD8-212ENST00000557329 VGFO15240 615 aaPredicted RBP10.31□□□□□ -0.76
CHD8-212ENST00000557329 PSEN1P49768 467 aa10.29□□□□□ -0.76
CHD8-212ENST00000557329 PDAP1Q13442 181 aaKnown RBP10.29□□□□□ -0.76
CHD8-212ENST00000557329 C3orf67Q6ZVT6 689 aa10.29□□□□□ -0.76
CHD8-212ENST00000557329 RTN4Q9NQC3 1192 aaKnown RBP10.26□□□□□ -0.77
CHD8-212ENST00000557329 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.26□□□□□ -0.77
CHD8-212ENST00000557329 ILDR1Q86SU0 546 aaPredicted RBP10.25□□□□□ -0.77
CHD8-212ENST00000557329 MARVELD3Q96A59 401 aa10.24□□□□□ -0.77
CHD8-212ENST00000557329 SPNS2Q8IVW8 549 aa10.23□□□□□ -0.77
CHD8-212ENST00000557329 MMRN1Q13201 1228 aa10.22□□□□□ -0.77
CHD8-212ENST00000557329 RGL2O15211 777 aa10.2□□□□□ -0.78
CHD8-212ENST00000557329 RNF25Q96BH1 459 aaPredicted RBP10.19□□□□□ -0.78
CHD8-212ENST00000557329 EMP3P54852 163 aa10.17□□□□□ -0.78
CHD8-212ENST00000557329 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
CHD8-212ENST00000557329 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.14□□□□□ -0.79
CHD8-212ENST00000557329 DCAF8L2P0C7V8 631 aa10.14□□□□□ -0.79
CHD8-212ENST00000557329 DPY19L2Q6NUT2 758 aa10.14□□□□□ -0.79
CHD8-212ENST00000557329 ZFP91Q96JP5 570 aaPredicted RBP10.14□□□□□ -0.79
CHD8-212ENST00000557329 STK25O00506 426 aa10.13□□□□□ -0.79
CHD8-212ENST00000557329 HS6ST3Q8IZP7 471 aa10.13□□□□□ -0.79
CHD8-212ENST00000557329 BOLA1Q9Y3E2 137 aa10.13□□□□□ -0.79
CHD8-212ENST00000557329 G3V3G9 751 aa10.12□□□□□ -0.79
CHD8-212ENST00000557329 HS3ST6Q96QI5 342 aa10.12□□□□□ -0.79
CHD8-212ENST00000557329 RYDENQ9NUL5 291 aaKnown RBP10.11□□□□□ -0.79
CHD8-212ENST00000557329 POTEB3A0JP26 581 aa10.09□□□□□ -0.79
CHD8-212ENST00000557329 FAM205CA6NFA0 338 aa10.09□□□□□ -0.79
CHD8-212ENST00000557329 SOX12O15370 315 aa10.09□□□□□ -0.79
CHD8-212ENST00000557329 POTEBQ6S5H4 581 aa10.09□□□□□ -0.79
CHD8-212ENST00000557329 KRTAP3-3Q9BYR6 98 aa10.09□□□□□ -0.79
CHD8-212ENST00000557329 KRTAP3-2Q9BYR7 98 aa10.09□□□□□ -0.79
CHD8-212ENST00000557329 BCL11BQ9C0K0 894 aaPredicted RBP10.09□□□□□ -0.79
CHD8-212ENST00000557329 DNAJC5Q9H3Z4 198 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms