RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.59□□□□□ -0.55
FOXN3-215ENST00000557261 RGL2O15211 777 aa11.57□□□□□ -0.56
FOXN3-215ENST00000557261 EVX2Q03828 476 aa11.55□□□□□ -0.56
FOXN3-215ENST00000557261 KLHL34Q8N239 644 aa11.54□□□□□ -0.56
FOXN3-215ENST00000557261 SPOCK2Q92563 424 aa11.54□□□□□ -0.56
FOXN3-215ENST00000557261 C19orf67A6NJJ6 358 aa11.49□□□□□ -0.57
FOXN3-215ENST00000557261 STAG3Q9UJ98 1225 aa11.47□□□□□ -0.57
FOXN3-215ENST00000557261 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
FOXN3-215ENST00000557261 FARP1Q9Y4F1 1045 aaPredicted RBP11.44□□□□□ -0.58
FOXN3-215ENST00000557261 TIMELESSQ9UNS1 1208 aa11.42□□□□□ -0.58
FOXN3-215ENST00000557261 CREBZFQ9NS37 354 aa11.39□□□□□ -0.59
FOXN3-215ENST00000557261 CHGAP10645 457 aaKnown RBP11.37□□□□□ -0.59
FOXN3-215ENST00000557261 ZCCHC6Q5VYS8 1495 aaKnown RBP11.37□□□□□ -0.59
FOXN3-215ENST00000557261 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
FOXN3-215ENST00000557261 TULP1O00294 542 aaPredicted RBP11.33□□□□□ -0.6
FOXN3-215ENST00000557261 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
FOXN3-215ENST00000557261 DNAJC5Q9H3Z4 198 aa11.31□□□□□ -0.6
FOXN3-215ENST00000557261 ABCC9O60706 1549 aa11.3□□□□□ -0.6
FOXN3-215ENST00000557261 GABBR2O75899 941 aa11.3□□□□□ -0.6
FOXN3-215ENST00000557261 DCAF1Q9Y4B6 1507 aa11.3□□□□□ -0.6
FOXN3-215ENST00000557261 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
FOXN3-215ENST00000557261 NBR1Q14596 966 aa11.27□□□□□ -0.61
FOXN3-215ENST00000557261 MIER1Q8N108 512 aa11.26□□□□□ -0.61
FOXN3-215ENST00000557261 ZRANB1Q9UGI0 708 aa11.21□□□□□ -0.61
FOXN3-215ENST00000557261 MYO15BQ96JP2 1530 aa11.2□□□□□ -0.62
FOXN3-215ENST00000557261 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
FOXN3-215ENST00000557261 GTF3C3Q9Y5Q9 886 aa11.2□□□□□ -0.62
FOXN3-215ENST00000557261 ZNF579Q8NAF0 562 aaKnown RBP11.19□□□□□ -0.62
FOXN3-215ENST00000557261 RNF25Q96BH1 459 aaPredicted RBP11.18□□□□□ -0.62
FOXN3-215ENST00000557261 NKX1-1Q15270 411 aaPredicted RBP11.16□□□□□ -0.62
FOXN3-215ENST00000557261 HS6ST3Q8IZP7 471 aa11.16□□□□□ -0.62
FOXN3-215ENST00000557261 PAK3O75914 559 aaPredicted RBP11.14□□□□□ -0.63
FOXN3-215ENST00000557261 CLCN6P51797 869 aa11.1□□□□□ -0.63
FOXN3-215ENST00000557261 PHF12Q96QT6 1004 aa11.09□□□□□ -0.63
FOXN3-215ENST00000557261 GTPBP6O43824 516 aaPredicted RBP11.07□□□□□ -0.64
FOXN3-215ENST00000557261 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
FOXN3-215ENST00000557261 NACADO15069 1562 aa11.05□□□□□ -0.64
FOXN3-215ENST00000557261 GALR2O43603 387 aaPredicted RBP11.05□□□□□ -0.64
FOXN3-215ENST00000557261 PLEKHG5O94827 1062 aa11.05□□□□□ -0.64
FOXN3-215ENST00000557261 DCBLD2Q96PD2 775 aa11.03□□□□□ -0.64
FOXN3-215ENST00000557261 TSPYL2Q9H2G4 693 aaPredicted RBP11□□□□□ -0.65
FOXN3-215ENST00000557261 TMEM132AQ24JP5 1023 aa10.99□□□□□ -0.65
FOXN3-215ENST00000557261 TRIM41Q8WV44 630 aa10.97□□□□□ -0.65
FOXN3-215ENST00000557261 ARXQ96QS3 562 aa10.96□□□□□ -0.65
FOXN3-215ENST00000557261 LHX8Q68G74 356 aa10.95□□□□□ -0.66
FOXN3-215ENST00000557261 NUBP1P53384 320 aa10.94□□□□□ -0.66
FOXN3-215ENST00000557261 MS4A3Q96HJ5 214 aa10.94□□□□□ -0.66
FOXN3-215ENST00000557261 RB1CC1Q8TDY2 1594 aa10.94□□□□□ -0.66
FOXN3-215ENST00000557261 RIOK3O14730 519 aaKnown RBP10.93□□□□□ -0.66
FOXN3-215ENST00000557261 RASEFQ8IZ41 740 aa10.93□□□□□ -0.66
FOXN3-215ENST00000557261 ZBTB47Q9UFB7 747 aaPredicted RBP10.93□□□□□ -0.66
FOXN3-215ENST00000557261 CCDC61Q9Y6R9 512 aa10.93□□□□□ -0.66
FOXN3-215ENST00000557261 DAXXQ9UER7 740 aaPredicted RBP10.92□□□□□ -0.66
FOXN3-215ENST00000557261 STK25O00506 426 aa10.91□□□□□ -0.66
FOXN3-215ENST00000557261 GSE1Q14687 1217 aa10.88□□□□□ -0.67
FOXN3-215ENST00000557261 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
FOXN3-215ENST00000557261 C14orf37Q86TY3 774 aa10.88□□□□□ -0.67
FOXN3-215ENST00000557261 KIF12Q96FN5 646 aa10.84□□□□□ -0.67
FOXN3-215ENST00000557261 CADPS2Q86UW7 1296 aa10.81□□□□□ -0.68
FOXN3-215ENST00000557261 BCL11BQ9C0K0 894 aaPredicted RBP10.81□□□□□ -0.68
FOXN3-215ENST00000557261 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.8□□□□□ -0.68
FOXN3-215ENST00000557261 VGFO15240 615 aaPredicted RBP10.8□□□□□ -0.68
FOXN3-215ENST00000557261 MAP3K13O43283 966 aa10.8□□□□□ -0.68
FOXN3-215ENST00000557261 ASTLQ6HA08 431 aaPredicted RBP10.8□□□□□ -0.68
FOXN3-215ENST00000557261 PELP1Q8IZL8 1130 aaKnown RBP10.8□□□□□ -0.68
FOXN3-215ENST00000557261 ZFP91Q96JP5 570 aaPredicted RBP10.8□□□□□ -0.68
FOXN3-215ENST00000557261 STK24Q9Y6E0 443 aa10.8□□□□□ -0.68
FOXN3-215ENST00000557261 ATMINO43313 823 aaPredicted RBP10.79□□□□□ -0.68
FOXN3-215ENST00000557261 KCNV2Q8TDN2 545 aa10.78□□□□□ -0.68
FOXN3-215ENST00000557261 FAM212AQ96EL1 285 aa10.78□□□□□ -0.68
FOXN3-215ENST00000557261 LMOD2Q6P5Q4 547 aa10.77□□□□□ -0.69
FOXN3-215ENST00000557261 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.77□□□□□ -0.69
FOXN3-215ENST00000557261 TRPC6Q9Y210 931 aa10.77□□□□□ -0.69
FOXN3-215ENST00000557261 BRPF1P55201 1214 aaPredicted RBP10.76□□□□□ -0.69
FOXN3-215ENST00000557261 ERICH6Q7L0X2 663 aa10.76□□□□□ -0.69
FOXN3-215ENST00000557261 HOMEZQ8IX15 550 aa10.76□□□□□ -0.69
FOXN3-215ENST00000557261 SCRIBQ14160 1630 aa10.75□□□□□ -0.69
FOXN3-215ENST00000557261 METRNQ9UJH8 293 aa10.74□□□□□ -0.69
FOXN3-215ENST00000557261 UNC13AQ9UPW8 1703 aa10.73□□□□□ -0.69
FOXN3-215ENST00000557261 ATN1P54259 1190 aaPredicted RBP10.73□□□□□ -0.69
FOXN3-215ENST00000557261 BMP2KQ9NSY1 1161 aaPredicted RBP10.73□□□□□ -0.69
FOXN3-215ENST00000557261 SLC39A7Q92504 469 aa10.72□□□□□ -0.69
FOXN3-215ENST00000557261 PCDHB13Q9Y5F0 798 aa10.72□□□□□ -0.69
FOXN3-215ENST00000557261 POTEB2H3BUK9 544 aa10.71□□□□□ -0.69
FOXN3-215ENST00000557261 SUPT5HO00267 1087 aaKnown RBP10.71□□□□□ -0.69
FOXN3-215ENST00000557261 TIE1P35590 1138 aa10.7□□□□□ -0.7
FOXN3-215ENST00000557261 PYGBP11216 843 aa10.69□□□□□ -0.7
FOXN3-215ENST00000557261 SGIP1Q9BQI5 828 aa10.69□□□□□ -0.7
FOXN3-215ENST00000557261 C7P10643 843 aa10.68□□□□□ -0.7
FOXN3-215ENST00000557261 CHRM1P11229 460 aaPredicted RBP10.68□□□□□ -0.7
FOXN3-215ENST00000557261 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
FOXN3-215ENST00000557261 TTLL13PA6NNM8 815 aa10.66□□□□□ -0.7
FOXN3-215ENST00000557261 IFNL1Q8IU54 200 aa10.66□□□□□ -0.7
FOXN3-215ENST00000557261 SHROOM4Q9ULL8 1493 aa10.66□□□□□ -0.7
FOXN3-215ENST00000557261 OTUD5Q96G74 571 aa10.64□□□□□ -0.71
FOXN3-215ENST00000557261 ZC3H15Q8WU90 426 aaKnown RBP10.62□□□□□ -0.71
FOXN3-215ENST00000557261 NEUROD2Q15784 382 aa10.61□□□□□ -0.71
FOXN3-215ENST00000557261 WDR70Q9NW82 654 aa10.61□□□□□ -0.71
FOXN3-215ENST00000557261 SLC24A3Q9HC58 644 aa10.6□□□□□ -0.71
FOXN3-215ENST00000557261 TRIM35Q9UPQ4 493 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms