RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 KLHL34Q8N239 644 aa12.74□□□□□ -0.37
ATXN3-246ENST00000557030 PHF12Q96QT6 1004 aa12.72□□□□□ -0.37
ATXN3-246ENST00000557030 SPOCK2Q92563 424 aa12.69□□□□□ -0.38
ATXN3-246ENST00000557030 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
ATXN3-246ENST00000557030 KIF12Q96FN5 646 aa12.66□□□□□ -0.38
ATXN3-246ENST00000557030 GALR2O43603 387 aaPredicted RBP12.64□□□□□ -0.39
ATXN3-246ENST00000557030 DCAF8Q5TAQ9 597 aa12.6□□□□□ -0.39
ATXN3-246ENST00000557030 POTEIP0CG38 1075 aa12.59□□□□□ -0.39
ATXN3-246ENST00000557030 GSE1Q14687 1217 aa12.59□□□□□ -0.39
ATXN3-246ENST00000557030 MS4A3Q96HJ5 214 aa12.59□□□□□ -0.39
ATXN3-246ENST00000557030 MAP3K13O43283 966 aa12.58□□□□□ -0.4
ATXN3-246ENST00000557030 SGIP1Q9BQI5 828 aa12.57□□□□□ -0.4
ATXN3-246ENST00000557030 CHRM1P11229 460 aaPredicted RBP12.53□□□□□ -0.4
ATXN3-246ENST00000557030 PYGBP11216 843 aa12.51□□□□□ -0.41
ATXN3-246ENST00000557030 TRPC6Q9Y210 931 aa12.48□□□□□ -0.41
ATXN3-246ENST00000557030 PCDHB13Q9Y5F0 798 aa12.48□□□□□ -0.41
ATXN3-246ENST00000557030 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
ATXN3-246ENST00000557030 CIZ1Q9ULV3 898 aaPredicted RBP12.46□□□□□ -0.41
ATXN3-246ENST00000557030 ASTLQ6HA08 431 aaPredicted RBP12.45□□□□□ -0.42
ATXN3-246ENST00000557030 DCBLD2Q96PD2 775 aa12.45□□□□□ -0.42
ATXN3-246ENST00000557030 ATMINO43313 823 aaPredicted RBP12.42□□□□□ -0.42
ATXN3-246ENST00000557030 TIE1P35590 1138 aa12.41□□□□□ -0.42
ATXN3-246ENST00000557030 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
ATXN3-246ENST00000557030 BMP2KQ9NSY1 1161 aaPredicted RBP12.4□□□□□ -0.42
ATXN3-246ENST00000557030 PELP1Q8IZL8 1130 aaKnown RBP12.39□□□□□ -0.43
ATXN3-246ENST00000557030 PCDHB8Q9UN66 801 aa12.38□□□□□ -0.43
ATXN3-246ENST00000557030 PKD2Q13563 968 aa12.36□□□□□ -0.43
ATXN3-246ENST00000557030 ZNF467Q7Z7K2 595 aaPredicted RBP12.36□□□□□ -0.43
ATXN3-246ENST00000557030 TTLL13PA6NNM8 815 aa12.35□□□□□ -0.43
ATXN3-246ENST00000557030 ATN1P54259 1190 aaPredicted RBP12.35□□□□□ -0.43
ATXN3-246ENST00000557030 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
ATXN3-246ENST00000557030 TMEM106CQ9BVX2 250 aa12.27□□□□□ -0.45
ATXN3-246ENST00000557030 SLC39A7Q92504 469 aa12.24□□□□□ -0.45
ATXN3-246ENST00000557030 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
ATXN3-246ENST00000557030 C7P10643 843 aa12.23□□□□□ -0.45
ATXN3-246ENST00000557030 PSEN1P49768 467 aa12.23□□□□□ -0.45
ATXN3-246ENST00000557030 PDAP1Q13442 181 aaKnown RBP12.23□□□□□ -0.45
ATXN3-246ENST00000557030 POTEFA5A3E0 1075 aa12.21□□□□□ -0.45
ATXN3-246ENST00000557030 RIOK3O14730 519 aaKnown RBP12.21□□□□□ -0.45
ATXN3-246ENST00000557030 ECM2O94769 699 aaPredicted RBP12.21□□□□□ -0.45
ATXN3-246ENST00000557030 METRNQ9UJH8 293 aa12.21□□□□□ -0.45
ATXN3-246ENST00000557030 IER5LQ5T953 404 aa12.2□□□□□ -0.46
ATXN3-246ENST00000557030 POTEB2H3BUK9 544 aa12.18□□□□□ -0.46
ATXN3-246ENST00000557030 RGL2O15211 777 aa12.17□□□□□ -0.46
ATXN3-246ENST00000557030 LHX8Q68G74 356 aa12.16□□□□□ -0.46
ATXN3-246ENST00000557030 VGFO15240 615 aaPredicted RBP12.14□□□□□ -0.47
ATXN3-246ENST00000557030 IRX5P78411 483 aaPredicted RBP12.13□□□□□ -0.47
ATXN3-246ENST00000557030 COLQQ9Y215 455 aaPredicted RBP12.13□□□□□ -0.47
ATXN3-246ENST00000557030 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.11□□□□□ -0.47
ATXN3-246ENST00000557030 ZFP91Q96JP5 570 aaPredicted RBP12.11□□□□□ -0.47
ATXN3-246ENST00000557030 ILDR1Q86SU0 546 aaPredicted RBP12.1□□□□□ -0.47
ATXN3-246ENST00000557030 POTEJP0CG39 1038 aa12.09□□□□□ -0.47
ATXN3-246ENST00000557030 CABP2Q9NPB3 220 aa12.06□□□□□ -0.48
ATXN3-246ENST00000557030 TAOK2Q9UL54 1235 aa12.04□□□□□ -0.48
ATXN3-246ENST00000557030 SEC24BO95487 1268 aa12.03□□□□□ -0.48
ATXN3-246ENST00000557030 PDCD7Q8N8D1 485 aaKnown RBP12.03□□□□□ -0.48
ATXN3-246ENST00000557030 OCEL1Q9H607 264 aa12.03□□□□□ -0.48
ATXN3-246ENST00000557030 MKRN3Q13064 507 aaKnown RBP12.02□□□□□ -0.49
ATXN3-246ENST00000557030 GOLGA2Q08379 1002 aa12□□□□□ -0.49
ATXN3-246ENST00000557030 EFCAB3Q8N7B9 438 aa12□□□□□ -0.49
ATXN3-246ENST00000557030 OTUD5Q96G74 571 aa12□□□□□ -0.49
ATXN3-246ENST00000557030 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
ATXN3-246ENST00000557030 PLCG2P16885 1265 aa11.99□□□□□ -0.49
ATXN3-246ENST00000557030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.97□□□□□ -0.493e-6■■□□□ 13.5
ATXN3-246ENST00000557030 STK25O00506 426 aa11.95□□□□□ -0.5
ATXN3-246ENST00000557030 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
ATXN3-246ENST00000557030 SOX12O15370 315 aa11.94□□□□□ -0.5
ATXN3-246ENST00000557030 STK24Q9Y6E0 443 aa11.94□□□□□ -0.5
ATXN3-246ENST00000557030 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
ATXN3-246ENST00000557030 HS6ST3Q8IZP7 471 aa11.92□□□□□ -0.5
ATXN3-246ENST00000557030 DPY19L2Q6NUT2 758 aa11.9□□□□□ -0.5
ATXN3-246ENST00000557030 MAMSTRQ6ZN01 415 aa11.9□□□□□ -0.5
ATXN3-246ENST00000557030 DNAJC5Q9H3Z4 198 aa11.9□□□□□ -0.5
ATXN3-246ENST00000557030 FBXO22Q8NEZ5 403 aa11.89□□□□□ -0.51
ATXN3-246ENST00000557030 MS4A4AQ96JQ5 239 aa11.89□□□□□ -0.51
ATXN3-246ENST00000557030 MFRPQ9BY79 579 aa11.88□□□□□ -0.51
ATXN3-246ENST00000557030 PHF8Q9UPP1 1060 aa11.88□□□□□ -0.51
ATXN3-246ENST00000557030 L3MBTL3Q96JM7 780 aaPredicted RBP11.84□□□□□ -0.51
ATXN3-246ENST00000557030 SCUBE2Q9NQ36 999 aa11.84□□□□□ -0.51
ATXN3-246ENST00000557030 CHGAP10645 457 aaKnown RBP11.83□□□□□ -0.52
ATXN3-246ENST00000557030 TMEM121BQ9BXQ6 578 aaPredicted RBP11.83□□□□□ -0.52
ATXN3-246ENST00000557030 NLRP6P59044 892 aa11.82□□□□□ -0.52
ATXN3-246ENST00000557030 NKX1-1Q15270 411 aaPredicted RBP11.79□□□□□ -0.52
ATXN3-246ENST00000557030 BOLA1Q9Y3E2 137 aa11.79□□□□□ -0.52
ATXN3-246ENST00000557030 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
ATXN3-246ENST00000557030 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.73□□□□□ -0.53
ATXN3-246ENST00000557030 SLAIN1Q8ND83 568 aa11.71□□□□□ -0.53
ATXN3-246ENST00000557030 PPP1R37O75864 691 aa11.69□□□□□ -0.54
ATXN3-246ENST00000557030 C3orf67Q6ZVT6 689 aa11.69□□□□□ -0.54
ATXN3-246ENST00000557030 DCAF8L2P0C7V8 631 aa11.67□□□□□ -0.54
ATXN3-246ENST00000557030 TMEM92Q6UXU6 159 aa11.66□□□□□ -0.54
ATXN3-246ENST00000557030 G3V3G9 751 aa11.64□□□□□ -0.55
ATXN3-246ENST00000557030 GTPBP6O43824 516 aaPredicted RBP11.64□□□□□ -0.55
ATXN3-246ENST00000557030 LCE2DQ5TA82 110 aaPredicted RBP11.64□□□□□ -0.55
ATXN3-246ENST00000557030 RYDENQ9NUL5 291 aaKnown RBP11.6□□□□□ -0.55
ATXN3-246ENST00000557030 BBXQ8WY36 941 aaPredicted RBP11.59□□□□□ -0.55
ATXN3-246ENST00000557030 KIF3CO14782 793 aa11.58□□□□□ -0.56
ATXN3-246ENST00000557030 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
ATXN3-246ENST00000557030 SNPHO15079 494 aa11.51□□□□□ -0.57
ATXN3-246ENST00000557030 ST18O60284 1047 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms