RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 MS4A3Q96HJ5 214 aa10.94□□□□□ -0.66
FOXN3-213ENST00000556916 RASEFQ8IZ41 740 aa10.93□□□□□ -0.66
FOXN3-213ENST00000556916 CCDC61Q9Y6R9 512 aa10.93□□□□□ -0.66
FOXN3-213ENST00000556916 ZBTB47Q9UFB7 747 aaPredicted RBP10.9□□□□□ -0.66
FOXN3-213ENST00000556916 POTEGQ6S5H5 508 aa10.86□□□□□ -0.67
FOXN3-213ENST00000556916 FBXO3Q9UK99 471 aa10.86□□□□□ -0.67
FOXN3-213ENST00000556916 NUBP1P53384 320 aa10.84□□□□□ -0.67
FOXN3-213ENST00000556916 KIF12Q96FN5 646 aa10.84□□□□□ -0.67
FOXN3-213ENST00000556916 MAP3K13O43283 966 aa10.8□□□□□ -0.68
FOXN3-213ENST00000556916 ASTLQ6HA08 431 aaPredicted RBP10.8□□□□□ -0.68
FOXN3-213ENST00000556916 PELP1Q8IZL8 1130 aaKnown RBP10.8□□□□□ -0.68
FOXN3-213ENST00000556916 ATMINO43313 823 aaPredicted RBP10.79□□□□□ -0.68
FOXN3-213ENST00000556916 VASPP50552 380 aaPredicted RBP10.78□□□□□ -0.68
FOXN3-213ENST00000556916 FAM212AQ96EL1 285 aa10.78□□□□□ -0.68
FOXN3-213ENST00000556916 PCDH10Q9P2E7 1040 aa10.78□□□□□ -0.68
FOXN3-213ENST00000556916 TRPC6Q9Y210 931 aa10.77□□□□□ -0.69
FOXN3-213ENST00000556916 OTUD5Q96G74 571 aa10.75□□□□□ -0.69
FOXN3-213ENST00000556916 METRNQ9UJH8 293 aa10.74□□□□□ -0.69
FOXN3-213ENST00000556916 ATN1P54259 1190 aaPredicted RBP10.73□□□□□ -0.69
FOXN3-213ENST00000556916 BMP2KQ9NSY1 1161 aaPredicted RBP10.73□□□□□ -0.69
FOXN3-213ENST00000556916 SLC39A7Q92504 469 aa10.72□□□□□ -0.69
FOXN3-213ENST00000556916 PCDHB13Q9Y5F0 798 aa10.72□□□□□ -0.69
FOXN3-213ENST00000556916 POTEB2H3BUK9 544 aa10.71□□□□□ -0.69
FOXN3-213ENST00000556916 TIE1P35590 1138 aa10.7□□□□□ -0.7
FOXN3-213ENST00000556916 KLHL34Q8N239 644 aa10.69□□□□□ -0.7
FOXN3-213ENST00000556916 C7P10643 843 aa10.68□□□□□ -0.7
FOXN3-213ENST00000556916 SGIP1Q9BQI5 828 aa10.68□□□□□ -0.7
FOXN3-213ENST00000556916 DCAF8Q5TAQ9 597 aa10.67□□□□□ -0.7
FOXN3-213ENST00000556916 TTLL13PA6NNM8 815 aa10.66□□□□□ -0.7
FOXN3-213ENST00000556916 IFNL1Q8IU54 200 aa10.66□□□□□ -0.7
FOXN3-213ENST00000556916 PYGBP11216 843 aa10.63□□□□□ -0.71
FOXN3-213ENST00000556916 TRIM35Q9UPQ4 493 aa10.6□□□□□ -0.71
FOXN3-213ENST00000556916 POTEFA5A3E0 1075 aa10.58□□□□□ -0.72
FOXN3-213ENST00000556916 POTEJP0CG39 1038 aa10.57□□□□□ -0.72
FOXN3-213ENST00000556916 IFNLR1Q8IU57 520 aaPredicted RBP10.57□□□□□ -0.72
FOXN3-213ENST00000556916 TMEM106CQ9BVX2 250 aa10.57□□□□□ -0.72
FOXN3-213ENST00000556916 GSE1Q14687 1217 aa10.56□□□□□ -0.72
FOXN3-213ENST00000556916 PCDHB8Q9UN66 801 aa10.54□□□□□ -0.72
FOXN3-213ENST00000556916 SEC24BO95487 1268 aa10.53□□□□□ -0.72
FOXN3-213ENST00000556916 COLQQ9Y215 455 aaPredicted RBP10.53□□□□□ -0.72
FOXN3-213ENST00000556916 IER5LQ5T953 404 aa10.52□□□□□ -0.73
FOXN3-213ENST00000556916 SPOCK2Q92563 424 aa10.52□□□□□ -0.73
FOXN3-213ENST00000556916 MAMSTRQ6ZN01 415 aa10.51□□□□□ -0.73
FOXN3-213ENST00000556916 SCUBE2Q9NQ36 999 aa10.49□□□□□ -0.73
FOXN3-213ENST00000556916 ZNF467Q7Z7K2 595 aaPredicted RBP10.48□□□□□ -0.73
FOXN3-213ENST00000556916 CIZ1Q9ULV3 898 aaPredicted RBP10.47□□□□□ -0.73
FOXN3-213ENST00000556916 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
FOXN3-213ENST00000556916 CHRM1P11229 460 aaPredicted RBP10.44□□□□□ -0.74
FOXN3-213ENST00000556916 PLCG2P16885 1265 aa10.44□□□□□ -0.74
FOXN3-213ENST00000556916 IRX5P78411 483 aaPredicted RBP10.42□□□□□ -0.74
FOXN3-213ENST00000556916 PSEN1P49768 467 aa10.38□□□□□ -0.75
FOXN3-213ENST00000556916 OCEL1Q9H607 264 aa10.36□□□□□ -0.75
FOXN3-213ENST00000556916 GOLGA2Q08379 1002 aa10.35□□□□□ -0.75
FOXN3-213ENST00000556916 PDAP1Q13442 181 aaKnown RBP10.35□□□□□ -0.75
FOXN3-213ENST00000556916 MKRN3Q13064 507 aaKnown RBP10.32□□□□□ -0.76
FOXN3-213ENST00000556916 PDCD7Q8N8D1 485 aaKnown RBP10.3□□□□□ -0.76
FOXN3-213ENST00000556916 TRIM41Q8WV44 630 aa10.3□□□□□ -0.76
FOXN3-213ENST00000556916 SLAIN1Q8ND83 568 aa10.29□□□□□ -0.76
FOXN3-213ENST00000556916 FAM163AQ96GL9 167 aaPredicted RBP10.28□□□□□ -0.76
FOXN3-213ENST00000556916 CABP2Q9NPB3 220 aa10.27□□□□□ -0.77
FOXN3-213ENST00000556916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.27□□□□□ -0.772e-7■□□□□ 10.6
FOXN3-213ENST00000556916 RNF25Q96BH1 459 aaPredicted RBP10.22□□□□□ -0.77
FOXN3-213ENST00000556916 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.22□□□□□ -0.77
FOXN3-213ENST00000556916 C3orf67Q6ZVT6 689 aa10.2□□□□□ -0.78
FOXN3-213ENST00000556916 ILDR1Q86SU0 546 aaPredicted RBP10.19□□□□□ -0.78
FOXN3-213ENST00000556916 CDAN1Q8IWY9 1227 aa10.19□□□□□ -0.78
FOXN3-213ENST00000556916 RIOK3O14730 519 aaKnown RBP10.18□□□□□ -0.78
FOXN3-213ENST00000556916 L3MBTL3Q96JM7 780 aaPredicted RBP10.18□□□□□ -0.78
FOXN3-213ENST00000556916 DPY19L2Q6NUT2 758 aa10.16□□□□□ -0.78
FOXN3-213ENST00000556916 EFCAB3Q8N7B9 438 aa10.15□□□□□ -0.78
FOXN3-213ENST00000556916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.14□□□□□ -0.79
FOXN3-213ENST00000556916 ZFP91Q96JP5 570 aaPredicted RBP10.14□□□□□ -0.79
FOXN3-213ENST00000556916 VGFO15240 615 aaPredicted RBP10.13□□□□□ -0.79
FOXN3-213ENST00000556916 ST18O60284 1047 aa10.13□□□□□ -0.79
FOXN3-213ENST00000556916 G3V3G9 751 aa10.11□□□□□ -0.79
FOXN3-213ENST00000556916 BOLA1Q9Y3E2 137 aa10.1□□□□□ -0.79
FOXN3-213ENST00000556916 MMRN1Q13201 1228 aa10.09□□□□□ -0.79
FOXN3-213ENST00000556916 SNPHO15079 494 aa10.08□□□□□ -0.8
FOXN3-213ENST00000556916 ECM2O94769 699 aaPredicted RBP10.06□□□□□ -0.8
FOXN3-213ENST00000556916 TMEM121BQ9BXQ6 578 aaPredicted RBP10.04□□□□□ -0.8
FOXN3-213ENST00000556916 BCL11BQ9C0K0 894 aaPredicted RBP10.03□□□□□ -0.8
FOXN3-213ENST00000556916 PHF8Q9UPP1 1060 aa10.03□□□□□ -0.8
FOXN3-213ENST00000556916 SOX12O15370 315 aa10.02□□□□□ -0.81
FOXN3-213ENST00000556916 PKD2Q13563 968 aa10.02□□□□□ -0.81
FOXN3-213ENST00000556916 MS4A4AQ96JQ5 239 aa10.02□□□□□ -0.81
FOXN3-213ENST00000556916 TAOK2Q9UL54 1235 aa10.02□□□□□ -0.81
FOXN3-213ENST00000556916 STK24Q9Y6E0 443 aa10.01□□□□□ -0.81
FOXN3-213ENST00000556916 SPNS2Q8IVW8 549 aa10□□□□□ -0.81
FOXN3-213ENST00000556916 MICALL2Q8IY33 904 aa10□□□□□ -0.81
FOXN3-213ENST00000556916 MARVELD3Q96A59 401 aa10□□□□□ -0.81
FOXN3-213ENST00000556916 STK25O00506 426 aa9.98□□□□□ -0.81
FOXN3-213ENST00000556916 RGL2O15211 777 aa9.98□□□□□ -0.81
FOXN3-213ENST00000556916 EMP3P54852 163 aa9.95□□□□□ -0.82
FOXN3-213ENST00000556916 NLRP6P59044 892 aa9.94□□□□□ -0.82
FOXN3-213ENST00000556916 HOXB3P14651 431 aaPredicted RBP9.93□□□□□ -0.82
FOXN3-213ENST00000556916 TMEM92Q6UXU6 159 aa9.93□□□□□ -0.82
FOXN3-213ENST00000556916 FBXO22Q8NEZ5 403 aa9.93□□□□□ -0.82
FOXN3-213ENST00000556916 MFRPQ9BY79 579 aa9.92□□□□□ -0.82
FOXN3-213ENST00000556916 DOK7Q18PE1 504 aa9.88□□□□□ -0.83
FOXN3-213ENST00000556916 ZNF710Q8N1W2 664 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms