RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 ECM2O94769 699 aaPredicted RBP16.03■□□□□ 0.16
LINC00871-204ENST00000556886 CD44P16070 742 aaKnown RBP16.02■□□□□ 0.16
LINC00871-204ENST00000556886 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
LINC00871-204ENST00000556886 C19orf67A6NJJ6 358 aa15.99■□□□□ 0.15
LINC00871-204ENST00000556886 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
LINC00871-204ENST00000556886 CCDC61Q9Y6R9 512 aa15.96■□□□□ 0.15
LINC00871-204ENST00000556886 ZRANB1Q9UGI0 708 aa15.94■□□□□ 0.14
LINC00871-204ENST00000556886 PYGBP11216 843 aa15.93■□□□□ 0.14
LINC00871-204ENST00000556886 RGL2O15211 777 aa15.89■□□□□ 0.13
LINC00871-204ENST00000556886 EVX2Q03828 476 aa15.88■□□□□ 0.13
LINC00871-204ENST00000556886 CHRM1P11229 460 aaPredicted RBP15.87■□□□□ 0.13
LINC00871-204ENST00000556886 RNF25Q96BH1 459 aaPredicted RBP15.84■□□□□ 0.13
LINC00871-204ENST00000556886 PHF12Q96QT6 1004 aa15.83■□□□□ 0.12
LINC00871-204ENST00000556886 ZNF579Q8NAF0 562 aaKnown RBP15.81■□□□□ 0.12
LINC00871-204ENST00000556886 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
LINC00871-204ENST00000556886 KIF12Q96FN5 646 aa15.79■□□□□ 0.12
LINC00871-204ENST00000556886 MAP3K13O43283 966 aa15.76■□□□□ 0.11
LINC00871-204ENST00000556886 RIOK3O14730 519 aaKnown RBP15.74■□□□□ 0.11
LINC00871-204ENST00000556886 PCDHB13Q9Y5F0 798 aa15.73■□□□□ 0.11
LINC00871-204ENST00000556886 PCDHB8Q9UN66 801 aa15.7■□□□□ 0.1
LINC00871-204ENST00000556886 ZNF467Q7Z7K2 595 aaPredicted RBP15.69■□□□□ 0.1
LINC00871-204ENST00000556886 IFNL1Q8IU54 200 aa15.68■□□□□ 0.1
LINC00871-204ENST00000556886 SGIP1Q9BQI5 828 aa15.68■□□□□ 0.1
LINC00871-204ENST00000556886 MS4A3Q96HJ5 214 aa15.65■□□□□ 0.1
LINC00871-204ENST00000556886 VGFO15240 615 aaPredicted RBP15.63■□□□□ 0.09
LINC00871-204ENST00000556886 GABBR2O75899 941 aa15.63■□□□□ 0.09
LINC00871-204ENST00000556886 TAOK2Q9UL54 1235 aa15.6■□□□□ 0.09
LINC00871-204ENST00000556886 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.58■□□□□ 0.08
LINC00871-204ENST00000556886 GALR2O43603 387 aaPredicted RBP15.58■□□□□ 0.08
LINC00871-204ENST00000556886 CHGAP10645 457 aaKnown RBP15.58■□□□□ 0.08
LINC00871-204ENST00000556886 LHX8Q68G74 356 aa15.58■□□□□ 0.08
LINC00871-204ENST00000556886 ZFP91Q96JP5 570 aaPredicted RBP15.58■□□□□ 0.08
LINC00871-204ENST00000556886 PDAP1Q13442 181 aaKnown RBP15.57■□□□□ 0.08
LINC00871-204ENST00000556886 TRPC6Q9Y210 931 aa15.55■□□□□ 0.08
LINC00871-204ENST00000556886 PSEN1P49768 467 aa15.54■□□□□ 0.08
LINC00871-204ENST00000556886 CLCN6P51797 869 aa15.54■□□□□ 0.08
LINC00871-204ENST00000556886 STK25O00506 426 aa15.53■□□□□ 0.08
LINC00871-204ENST00000556886 HS6ST3Q8IZP7 471 aa15.53■□□□□ 0.08
LINC00871-204ENST00000556886 BCL11BQ9C0K0 894 aaPredicted RBP15.5■□□□□ 0.07
LINC00871-204ENST00000556886 STK24Q9Y6E0 443 aa15.48■□□□□ 0.07
LINC00871-204ENST00000556886 TMEM106CQ9BVX2 250 aa15.43■□□□□ 0.06
LINC00871-204ENST00000556886 TIE1P35590 1138 aa15.42■□□□□ 0.06
LINC00871-204ENST00000556886 BBXQ8WY36 941 aaPredicted RBP15.41■□□□□ 0.06
LINC00871-204ENST00000556886 BMP2KQ9NSY1 1161 aaPredicted RBP15.4■□□□□ 0.06
LINC00871-204ENST00000556886 TTLL13PA6NNM8 815 aa15.39■□□□□ 0.05
LINC00871-204ENST00000556886 DNAJC5Q9H3Z4 198 aa15.37■□□□□ 0.05
LINC00871-204ENST00000556886 CABP2Q9NPB3 220 aa15.36■□□□□ 0.05
LINC00871-204ENST00000556886 NKX1-1Q15270 411 aaPredicted RBP15.34■□□□□ 0.05
LINC00871-204ENST00000556886 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.32■□□□□ 0.04
LINC00871-204ENST00000556886 ATMINO43313 823 aaPredicted RBP15.3■□□□□ 0.04
LINC00871-204ENST00000556886 ATN1P54259 1190 aaPredicted RBP15.3■□□□□ 0.04
LINC00871-204ENST00000556886 ASTLQ6HA08 431 aaPredicted RBP15.29■□□□□ 0.04
LINC00871-204ENST00000556886 EFCAB3Q8N7B9 438 aa15.29■□□□□ 0.04
LINC00871-204ENST00000556886 DCBLD2Q96PD2 775 aa15.29■□□□□ 0.04
LINC00871-204ENST00000556886 TRIM35Q9UPQ4 493 aa15.29■□□□□ 0.04
LINC00871-204ENST00000556886 GOLGA2Q08379 1002 aa15.27■□□□□ 0.04
LINC00871-204ENST00000556886 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
LINC00871-204ENST00000556886 PLCB2Q00722 1185 aa15.23■□□□□ 0.03
LINC00871-204ENST00000556886 POTEIP0CG38 1075 aa15.22■□□□□ 0.03
LINC00871-204ENST00000556886 CFAP44Q96MT7 982 aa15.21■□□□□ 0.03
LINC00871-204ENST00000556886 MFRPQ9BY79 579 aa15.21■□□□□ 0.03
LINC00871-204ENST00000556886 MKRN3Q13064 507 aaKnown RBP15.2■□□□□ 0.02
LINC00871-204ENST00000556886 GTPBP6O43824 516 aaPredicted RBP15.19■□□□□ 0.02
LINC00871-204ENST00000556886 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
LINC00871-204ENST00000556886 SPRYD3Q8NCJ5 442 aa15.19■□□□□ 0.02
LINC00871-204ENST00000556886 SOX12O15370 315 aa15.18■□□□□ 0.02
LINC00871-204ENST00000556886 PHF8Q9UPP1 1060 aa15.18■□□□□ 0.02
LINC00871-204ENST00000556886 NLRP6P59044 892 aa15.13■□□□□ 0.01
LINC00871-204ENST00000556886 FBXO22Q8NEZ5 403 aa15.13■□□□□ 0.01
LINC00871-204ENST00000556886 RYDENQ9NUL5 291 aaKnown RBP15.11■□□□□ 0.01
LINC00871-204ENST00000556886 IER5LQ5T953 404 aa15.1■□□□□ 0.01
LINC00871-204ENST00000556886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.1■□□□□ 0.01
LINC00871-204ENST00000556886 MS4A4AQ96JQ5 239 aa15.08■□□□□ 0
LINC00871-204ENST00000556886 ILDR1Q86SU0 546 aaPredicted RBP15.07■□□□□ 0
LINC00871-204ENST00000556886 IRX5P78411 483 aaPredicted RBP15.06■□□□□ 0
LINC00871-204ENST00000556886 PLSCR2Q9NRY7 297 aa15.06■□□□□ 0
LINC00871-204ENST00000556886 SLC39A7Q92504 469 aa15.05■□□□□ -0
LINC00871-204ENST00000556886 C7P10643 843 aa15.02■□□□□ -0
LINC00871-204ENST00000556886 PDCD7Q8N8D1 485 aaKnown RBP15.02■□□□□ -0
LINC00871-204ENST00000556886 METRNQ9UJH8 293 aa15.02■□□□□ -0
LINC00871-204ENST00000556886 PPP1R37O75864 691 aa15.01□□□□□ -0.01
LINC00871-204ENST00000556886 HAP1P54257 671 aaPredicted RBP15.01□□□□□ -0.01
LINC00871-204ENST00000556886 OCEL1Q9H607 264 aa15.01□□□□□ -0.01
LINC00871-204ENST00000556886 COLQQ9Y215 455 aaPredicted RBP15□□□□□ -0.01
LINC00871-204ENST00000556886 SLC24A1O60721 1099 aa14.99□□□□□ -0.01
LINC00871-204ENST00000556886 SEC24BO95487 1268 aa14.99□□□□□ -0.01
LINC00871-204ENST00000556886 PLCG2P16885 1265 aa14.99□□□□□ -0.01
LINC00871-204ENST00000556886 POTEFA5A3E0 1075 aa14.98□□□□□ -0.01
LINC00871-204ENST00000556886 DPY19L2Q6NUT2 758 aa14.98□□□□□ -0.01
LINC00871-204ENST00000556886 TSHZ2Q9NRE2 1034 aa14.96□□□□□ -0.01
LINC00871-204ENST00000556886 MICALL2Q8IY33 904 aa14.83□□□□□ -0.04
LINC00871-204ENST00000556886 CADPS2Q86UW7 1296 aa14.82□□□□□ -0.04
LINC00871-204ENST00000556886 BOLA1Q9Y3E2 137 aa14.82□□□□□ -0.04
LINC00871-204ENST00000556886 L3MBTL3Q96JM7 780 aaPredicted RBP14.81□□□□□ -0.04
LINC00871-204ENST00000556886 G3V3G9 751 aa14.79□□□□□ -0.04
LINC00871-204ENST00000556886 OTUD5Q96G74 571 aa14.79□□□□□ -0.04
LINC00871-204ENST00000556886 TMEM121BQ9BXQ6 578 aaPredicted RBP14.78□□□□□ -0.04
LINC00871-204ENST00000556886 POTEB2H3BUK9 544 aa14.75□□□□□ -0.05
LINC00871-204ENST00000556886 KDM2AQ9Y2K7 1162 aa14.75□□□□□ -0.05
LINC00871-204ENST00000556886 VSIG10Q8N0Z9 540 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms