RNA–Protein interactions for RNA: ENST00000556882.1

NEMF-212, Transcript of nuclear export mediator factor, humanhuman

TSL 2

Gene NEMF, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-212ENST00000556882 CCDC61Q9Y6R9 512 aa17.05■□□□□ 0.32
NEMF-212ENST00000556882 FAM212AQ96EL1 285 aa16.99■□□□□ 0.31
NEMF-212ENST00000556882 GALR2O43603 387 aaPredicted RBP16.97■□□□□ 0.31
NEMF-212ENST00000556882 CLCN6P51797 869 aa16.97■□□□□ 0.31
NEMF-212ENST00000556882 DCAF8Q5TAQ9 597 aa16.96■□□□□ 0.31
NEMF-212ENST00000556882 SPOCK2Q92563 424 aa16.94■□□□□ 0.3
NEMF-212ENST00000556882 KIF12Q96FN5 646 aa16.91■□□□□ 0.3
NEMF-212ENST00000556882 MS4A3Q96HJ5 214 aa16.89■□□□□ 0.29
NEMF-212ENST00000556882 MAP3K13O43283 966 aa16.86■□□□□ 0.29
NEMF-212ENST00000556882 POTEIP0CG38 1075 aa16.83■□□□□ 0.28
NEMF-212ENST00000556882 GSE1Q14687 1217 aa16.82■□□□□ 0.28
NEMF-212ENST00000556882 PYGBP11216 843 aa16.81■□□□□ 0.28
NEMF-212ENST00000556882 DCBLD2Q96PD2 775 aa16.8■□□□□ 0.28
NEMF-212ENST00000556882 CIZ1Q9ULV3 898 aaPredicted RBP16.78■□□□□ 0.28
NEMF-212ENST00000556882 PCDHB13Q9Y5F0 798 aa16.75■□□□□ 0.27
NEMF-212ENST00000556882 TRPC6Q9Y210 931 aa16.73■□□□□ 0.27
NEMF-212ENST00000556882 IFNL1Q8IU54 200 aa16.69■□□□□ 0.26
NEMF-212ENST00000556882 SGIP1Q9BQI5 828 aa16.69■□□□□ 0.26
NEMF-212ENST00000556882 PCDHB8Q9UN66 801 aa16.62■□□□□ 0.25
NEMF-212ENST00000556882 ATMINO43313 823 aaPredicted RBP16.61■□□□□ 0.25
NEMF-212ENST00000556882 BMP2KQ9NSY1 1161 aaPredicted RBP16.61■□□□□ 0.25
NEMF-212ENST00000556882 CHRM1P11229 460 aaPredicted RBP16.6■□□□□ 0.25
NEMF-212ENST00000556882 ASTLQ6HA08 431 aaPredicted RBP16.6■□□□□ 0.25
NEMF-212ENST00000556882 PELP1Q8IZL8 1130 aaKnown RBP16.6■□□□□ 0.25
NEMF-212ENST00000556882 TIE1P35590 1138 aa16.57■□□□□ 0.24
NEMF-212ENST00000556882 ATN1P54259 1190 aaPredicted RBP16.57■□□□□ 0.24
NEMF-212ENST00000556882 TTLL13PA6NNM8 815 aa16.53■□□□□ 0.24
NEMF-212ENST00000556882 ZNF467Q7Z7K2 595 aaPredicted RBP16.51■□□□□ 0.23
NEMF-212ENST00000556882 TRIM41Q8WV44 630 aa16.49■□□□□ 0.23
NEMF-212ENST00000556882 TMEM106CQ9BVX2 250 aa16.49■□□□□ 0.23
NEMF-212ENST00000556882 TRIM35Q9UPQ4 493 aa16.43■□□□□ 0.22
NEMF-212ENST00000556882 PKD2Q13563 968 aa16.41■□□□□ 0.22
NEMF-212ENST00000556882 SLC39A7Q92504 469 aa16.41■□□□□ 0.22
NEMF-212ENST00000556882 METRNQ9UJH8 293 aa16.41■□□□□ 0.22
NEMF-212ENST00000556882 PSEN1P49768 467 aa16.38■□□□□ 0.21
NEMF-212ENST00000556882 RNF25Q96BH1 459 aaPredicted RBP16.38■□□□□ 0.21
NEMF-212ENST00000556882 C7P10643 843 aa16.37■□□□□ 0.21
NEMF-212ENST00000556882 LHX8Q68G74 356 aa16.37■□□□□ 0.21
NEMF-212ENST00000556882 ECM2O94769 699 aaPredicted RBP16.36■□□□□ 0.21
NEMF-212ENST00000556882 PDAP1Q13442 181 aaKnown RBP16.35■□□□□ 0.21
NEMF-212ENST00000556882 RIOK3O14730 519 aaKnown RBP16.31■□□□□ 0.2
NEMF-212ENST00000556882 POTEB2H3BUK9 544 aa16.3■□□□□ 0.2
NEMF-212ENST00000556882 POTEFA5A3E0 1075 aa16.29■□□□□ 0.2
NEMF-212ENST00000556882 IER5LQ5T953 404 aa16.26■□□□□ 0.19
NEMF-212ENST00000556882 COLQQ9Y215 455 aaPredicted RBP16.26■□□□□ 0.19
NEMF-212ENST00000556882 RGL2O15211 777 aa16.24■□□□□ 0.19
NEMF-212ENST00000556882 SEC24BO95487 1268 aa16.23■□□□□ 0.19
NEMF-212ENST00000556882 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.19
NEMF-212ENST00000556882 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
NEMF-212ENST00000556882 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
NEMF-212ENST00000556882 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.2■□□□□ 0.18
NEMF-212ENST00000556882 ZFP91Q96JP5 570 aaPredicted RBP16.2■□□□□ 0.18
NEMF-212ENST00000556882 IRX5P78411 483 aaPredicted RBP16.17■□□□□ 0.18
NEMF-212ENST00000556882 POTEJP0CG39 1038 aa16.16■□□□□ 0.18
NEMF-212ENST00000556882 MKRN3Q13064 507 aaKnown RBP16.16■□□□□ 0.18
NEMF-212ENST00000556882 PLCG2P16885 1265 aa16.14■□□□□ 0.17
NEMF-212ENST00000556882 OCEL1Q9H607 264 aa16.1■□□□□ 0.17
NEMF-212ENST00000556882 EFCAB3Q8N7B9 438 aa16.08■□□□□ 0.16
NEMF-212ENST00000556882 OTUD5Q96G74 571 aa16.08■□□□□ 0.16
NEMF-212ENST00000556882 TAOK2Q9UL54 1235 aa16.08■□□□□ 0.16
NEMF-212ENST00000556882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.07■□□□□ 0.161e-7■■■■□ 20.2
NEMF-212ENST00000556882 BCL11BQ9C0K0 894 aaPredicted RBP16.06■□□□□ 0.16
NEMF-212ENST00000556882 PDCD7Q8N8D1 485 aaKnown RBP16.05■□□□□ 0.16
NEMF-212ENST00000556882 STK24Q9Y6E0 443 aa16.04■□□□□ 0.16
NEMF-212ENST00000556882 STK25O00506 426 aa16.03■□□□□ 0.16
NEMF-212ENST00000556882 ILDR1Q86SU0 546 aaPredicted RBP15.98■□□□□ 0.15
NEMF-212ENST00000556882 MAMSTRQ6ZN01 415 aa15.97■□□□□ 0.15
NEMF-212ENST00000556882 DPY19L2Q6NUT2 758 aa15.96■□□□□ 0.15
NEMF-212ENST00000556882 SCUBE2Q9NQ36 999 aa15.95■□□□□ 0.14
NEMF-212ENST00000556882 SOX12O15370 315 aa15.91■□□□□ 0.14
NEMF-212ENST00000556882 PHF8Q9UPP1 1060 aa15.91■□□□□ 0.14
NEMF-212ENST00000556882 CHGAP10645 457 aaKnown RBP15.86■□□□□ 0.13
NEMF-212ENST00000556882 RTN4Q9NQC3 1192 aaKnown RBP15.86■□□□□ 0.13
NEMF-212ENST00000556882 L3MBTL3Q96JM7 780 aaPredicted RBP15.85■□□□□ 0.13
NEMF-212ENST00000556882 MS4A4AQ96JQ5 239 aa15.85■□□□□ 0.13
NEMF-212ENST00000556882 AMER1Q5JTC6 1135 aaPredicted RBP15.84■□□□□ 0.13
NEMF-212ENST00000556882 HS6ST3Q8IZP7 471 aa15.84■□□□□ 0.13
NEMF-212ENST00000556882 DCAF8L2P0C7V8 631 aa15.83■□□□□ 0.12
NEMF-212ENST00000556882 MFRPQ9BY79 579 aa15.83■□□□□ 0.12
NEMF-212ENST00000556882 NLRP6P59044 892 aa15.8■□□□□ 0.12
NEMF-212ENST00000556882 FBXO22Q8NEZ5 403 aa15.8■□□□□ 0.12
NEMF-212ENST00000556882 BOLA1Q9Y3E2 137 aa15.79■□□□□ 0.12
NEMF-212ENST00000556882 SLAIN1Q8ND83 568 aa15.78■□□□□ 0.12
NEMF-212ENST00000556882 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.77■□□□□ 0.12
NEMF-212ENST00000556882 G3V3G9 751 aa15.76■□□□□ 0.11
NEMF-212ENST00000556882 C3orf67Q6ZVT6 689 aa15.76■□□□□ 0.11
NEMF-212ENST00000556882 TMEM121BQ9BXQ6 578 aaPredicted RBP15.7■□□□□ 0.1
NEMF-212ENST00000556882 MICALL2Q8IY33 904 aa15.69■□□□□ 0.1
NEMF-212ENST00000556882 NKX1-1Q15270 411 aaPredicted RBP15.67■□□□□ 0.1
NEMF-212ENST00000556882 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
NEMF-212ENST00000556882 PPP1R37O75864 691 aa15.62■□□□□ 0.09
NEMF-212ENST00000556882 FAM163AQ96GL9 167 aaPredicted RBP15.58■□□□□ 0.08
NEMF-212ENST00000556882 TMEM92Q6UXU6 159 aa15.56■□□□□ 0.08
NEMF-212ENST00000556882 LCE2DQ5TA82 110 aaPredicted RBP15.53■□□□□ 0.08
NEMF-212ENST00000556882 GTPBP6O43824 516 aaPredicted RBP15.47■□□□□ 0.07
NEMF-212ENST00000556882 SNPHO15079 494 aa15.46■□□□□ 0.07
NEMF-212ENST00000556882 RYDENQ9NUL5 291 aaKnown RBP15.45■□□□□ 0.06
NEMF-212ENST00000556882 ST18O60284 1047 aa15.44■□□□□ 0.06
NEMF-212ENST00000556882 POTEMA6NI47 508 aa15.39■□□□□ 0.05
NEMF-212ENST00000556882 HOXB3P14651 431 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms