RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-215ENST00000556839 ASTLQ6HA08 431 aaPredicted RBP16.21■□□□□ 0.19
RALGAPA1-215ENST00000556839 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
RALGAPA1-215ENST00000556839 FKBP8Q14318 412 aa16.19■□□□□ 0.18
RALGAPA1-215ENST00000556839 ATMINO43313 823 aaPredicted RBP16.17■□□□□ 0.18
RALGAPA1-215ENST00000556839 RASEFQ8IZ41 740 aa16.17■□□□□ 0.18
RALGAPA1-215ENST00000556839 KIF12Q96FN5 646 aa16.16■□□□□ 0.18
RALGAPA1-215ENST00000556839 POTEB2H3BUK9 544 aa16.15■□□□□ 0.18
RALGAPA1-215ENST00000556839 METRNQ9UJH8 293 aa16.15■□□□□ 0.18
RALGAPA1-215ENST00000556839 SLC39A7Q92504 469 aa16.14■□□□□ 0.17
RALGAPA1-215ENST00000556839 ZBTB47Q9UFB7 747 aaPredicted RBP16.14■□□□□ 0.17
RALGAPA1-215ENST00000556839 OTUD5Q96G74 571 aa16.13■□□□□ 0.17
RALGAPA1-215ENST00000556839 C7P10643 843 aa16.1■□□□□ 0.17
RALGAPA1-215ENST00000556839 MAP3K13O43283 966 aa16.07■□□□□ 0.16
RALGAPA1-215ENST00000556839 ATN1P54259 1190 aaPredicted RBP16.05■□□□□ 0.16
RALGAPA1-215ENST00000556839 POTEMA6NI47 508 aa16.02■□□□□ 0.16
RALGAPA1-215ENST00000556839 BMP2KQ9NSY1 1161 aaPredicted RBP16.01■□□□□ 0.15
RALGAPA1-215ENST00000556839 TRPC6Q9Y210 931 aa16.01■□□□□ 0.15
RALGAPA1-215ENST00000556839 TIE1P35590 1138 aa15.99■□□□□ 0.15
RALGAPA1-215ENST00000556839 NUBP1P53384 320 aa15.97■□□□□ 0.15
RALGAPA1-215ENST00000556839 POTEGQ6S5H5 508 aa15.95■□□□□ 0.14
RALGAPA1-215ENST00000556839 FAM212AQ96EL1 285 aa15.95■□□□□ 0.14
RALGAPA1-215ENST00000556839 PCDHB13Q9Y5F0 798 aa15.94■□□□□ 0.14
RALGAPA1-215ENST00000556839 MAMSTRQ6ZN01 415 aa15.92■□□□□ 0.14
RALGAPA1-215ENST00000556839 SGIP1Q9BQI5 828 aa15.92■□□□□ 0.14
RALGAPA1-215ENST00000556839 FBXO3Q9UK99 471 aa15.91■□□□□ 0.14
RALGAPA1-215ENST00000556839 POTEJP0CG39 1038 aa15.9■□□□□ 0.14
RALGAPA1-215ENST00000556839 TTLL13PA6NNM8 815 aa15.89■□□□□ 0.13
RALGAPA1-215ENST00000556839 SCUBE2Q9NQ36 999 aa15.87■□□□□ 0.13
RALGAPA1-215ENST00000556839 POTEFA5A3E0 1075 aa15.82■□□□□ 0.12
RALGAPA1-215ENST00000556839 SEC24BO95487 1268 aa15.82■□□□□ 0.12
RALGAPA1-215ENST00000556839 IFNL1Q8IU54 200 aa15.81■□□□□ 0.12
RALGAPA1-215ENST00000556839 TRIM35Q9UPQ4 493 aa15.81■□□□□ 0.12
RALGAPA1-215ENST00000556839 DCAF8Q5TAQ9 597 aa15.77■□□□□ 0.12
RALGAPA1-215ENST00000556839 PCDH10Q9P2E7 1040 aa15.77■□□□□ 0.12
RALGAPA1-215ENST00000556839 IER5LQ5T953 404 aa15.75■□□□□ 0.11
RALGAPA1-215ENST00000556839 COLQQ9Y215 455 aaPredicted RBP15.74■□□□□ 0.11
RALGAPA1-215ENST00000556839 TMEM106CQ9BVX2 250 aa15.73■□□□□ 0.11
RALGAPA1-215ENST00000556839 PYGBP11216 843 aa15.7■□□□□ 0.1
RALGAPA1-215ENST00000556839 VASPP50552 380 aaPredicted RBP15.68■□□□□ 0.1
RALGAPA1-215ENST00000556839 KLHL34Q8N239 644 aa15.68■□□□□ 0.1
RALGAPA1-215ENST00000556839 FAM163AQ96GL9 167 aaPredicted RBP15.63■□□□□ 0.09
RALGAPA1-215ENST00000556839 PLCG2P16885 1265 aa15.61■□□□□ 0.09
RALGAPA1-215ENST00000556839 GSE1Q14687 1217 aa15.59■□□□□ 0.09
RALGAPA1-215ENST00000556839 PCDHB8Q9UN66 801 aa15.58■□□□□ 0.08
RALGAPA1-215ENST00000556839 LCE2DQ5TA82 110 aaPredicted RBP15.54■□□□□ 0.08
RALGAPA1-215ENST00000556839 IRX5P78411 483 aaPredicted RBP15.53■□□□□ 0.08
RALGAPA1-215ENST00000556839 ZNF467Q7Z7K2 595 aaPredicted RBP15.5■□□□□ 0.07
RALGAPA1-215ENST00000556839 SLAIN1Q8ND83 568 aa15.48■□□□□ 0.07
RALGAPA1-215ENST00000556839 OCEL1Q9H607 264 aa15.47■□□□□ 0.07
RALGAPA1-215ENST00000556839 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
RALGAPA1-215ENST00000556839 CHRM1P11229 460 aaPredicted RBP15.41■□□□□ 0.06
RALGAPA1-215ENST00000556839 SPOCK2Q92563 424 aa15.38■□□□□ 0.05
RALGAPA1-215ENST00000556839 MKRN3Q13064 507 aaKnown RBP15.37■□□□□ 0.05
RALGAPA1-215ENST00000556839 IFNLR1Q8IU57 520 aaPredicted RBP15.36■□□□□ 0.05
RALGAPA1-215ENST00000556839 CIZ1Q9ULV3 898 aaPredicted RBP15.35■□□□□ 0.05
RALGAPA1-215ENST00000556839 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.34■□□□□ 0.05
RALGAPA1-215ENST00000556839 PSEN1P49768 467 aa15.33■□□□□ 0.04
RALGAPA1-215ENST00000556839 CDAN1Q8IWY9 1227 aa15.3■□□□□ 0.04
RALGAPA1-215ENST00000556839 PDCD7Q8N8D1 485 aaKnown RBP15.3■□□□□ 0.04
RALGAPA1-215ENST00000556839 ST18O60284 1047 aa15.29■□□□□ 0.04
RALGAPA1-215ENST00000556839 PDAP1Q13442 181 aaKnown RBP15.27■□□□□ 0.04
RALGAPA1-215ENST00000556839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.26■□□□□ 0.031e-13■■□□□ 13.2
RALGAPA1-215ENST00000556839 C3orf67Q6ZVT6 689 aa15.25■□□□□ 0.03
RALGAPA1-215ENST00000556839 SNPHO15079 494 aa15.23■□□□□ 0.03
RALGAPA1-215ENST00000556839 L3MBTL3Q96JM7 780 aaPredicted RBP15.23■□□□□ 0.03
RALGAPA1-215ENST00000556839 CABP2Q9NPB3 220 aa15.17■□□□□ 0.02
RALGAPA1-215ENST00000556839 TMEM121BQ9BXQ6 578 aaPredicted RBP15.16■□□□□ 0.02
RALGAPA1-215ENST00000556839 TRIM41Q8WV44 630 aa15.12■□□□□ 0.01
RALGAPA1-215ENST00000556839 ILDR1Q86SU0 546 aaPredicted RBP15.1■□□□□ 0.01
RALGAPA1-215ENST00000556839 G3V3G9 751 aa15.09■□□□□ 0.01
RALGAPA1-215ENST00000556839 DPY19L2Q6NUT2 758 aa15.06■□□□□ 0
RALGAPA1-215ENST00000556839 MARVELD3Q96A59 401 aa15.05■□□□□ -0
RALGAPA1-215ENST00000556839 BOLA1Q9Y3E2 137 aa15.03■□□□□ -0
RALGAPA1-215ENST00000556839 EMP3P54852 163 aa14.97□□□□□ -0.01
RALGAPA1-215ENST00000556839 EFCAB3Q8N7B9 438 aa14.95□□□□□ -0.02
RALGAPA1-215ENST00000556839 MMRN1Q13201 1228 aa14.93□□□□□ -0.02
RALGAPA1-215ENST00000556839 RIOK3O14730 519 aaKnown RBP14.92□□□□□ -0.02
RALGAPA1-215ENST00000556839 SPNS2Q8IVW8 549 aa14.91□□□□□ -0.02
RALGAPA1-215ENST00000556839 RNF25Q96BH1 459 aaPredicted RBP14.87□□□□□ -0.03
RALGAPA1-215ENST00000556839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.85□□□□□ -0.03
RALGAPA1-215ENST00000556839 FAM205CA6NFA0 338 aa14.85□□□□□ -0.03
RALGAPA1-215ENST00000556839 VGFO15240 615 aaPredicted RBP14.85□□□□□ -0.03
RALGAPA1-215ENST00000556839 ZFP91Q96JP5 570 aaPredicted RBP14.85□□□□□ -0.03
RALGAPA1-215ENST00000556839 HS3ST6Q96QI5 342 aa14.84□□□□□ -0.03
RALGAPA1-215ENST00000556839 ZNF710Q8N1W2 664 aa14.83□□□□□ -0.04
RALGAPA1-215ENST00000556839 HOXB3P14651 431 aaPredicted RBP14.82□□□□□ -0.04
RALGAPA1-215ENST00000556839 SOX12O15370 315 aa14.81□□□□□ -0.04
RALGAPA1-215ENST00000556839 DOK7Q18PE1 504 aa14.8□□□□□ -0.04
RALGAPA1-215ENST00000556839 MICALL2Q8IY33 904 aa14.79□□□□□ -0.04
RALGAPA1-215ENST00000556839 POTEB3A0JP26 581 aa14.76□□□□□ -0.05
RALGAPA1-215ENST00000556839 POTEBQ6S5H4 581 aa14.76□□□□□ -0.05
RALGAPA1-215ENST00000556839 RIMBP2O15034 1052 aa14.74□□□□□ -0.05
RALGAPA1-215ENST00000556839 PHF8Q9UPP1 1060 aa14.74□□□□□ -0.05
RALGAPA1-215ENST00000556839 HOXB1P14653 301 aaPredicted RBP14.73□□□□□ -0.05
RALGAPA1-215ENST00000556839 MS4A4AQ96JQ5 239 aa14.72□□□□□ -0.05
RALGAPA1-215ENST00000556839 TAOK2Q9UL54 1235 aa14.72□□□□□ -0.05
RALGAPA1-215ENST00000556839 KRTAP3-3Q9BYR6 98 aa14.71□□□□□ -0.05
RALGAPA1-215ENST00000556839 KRTAP3-2Q9BYR7 98 aa14.71□□□□□ -0.05
RALGAPA1-215ENST00000556839 TMEM92Q6UXU6 159 aa14.68□□□□□ -0.06
RALGAPA1-215ENST00000556839 ERBB3P21860 1342 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms