RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 VASPP50552 380 aaPredicted RBP12.27□□□□□ -0.45
ATXN3-243ENST00000556671 NUBP1P53384 320 aa12.26□□□□□ -0.45
ATXN3-243ENST00000556671 DCBLD2Q96PD2 775 aa12.22□□□□□ -0.45
ATXN3-243ENST00000556671 MS4A3Q96HJ5 214 aa12.19□□□□□ -0.46
ATXN3-243ENST00000556671 KIF12Q96FN5 646 aa12.18□□□□□ -0.46
ATXN3-243ENST00000556671 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
ATXN3-243ENST00000556671 KLHL34Q8N239 644 aa12.13□□□□□ -0.47
ATXN3-243ENST00000556671 MAP3K13O43283 966 aa12.11□□□□□ -0.47
ATXN3-243ENST00000556671 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
ATXN3-243ENST00000556671 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
ATXN3-243ENST00000556671 ASTLQ6HA08 431 aaPredicted RBP12.06□□□□□ -0.48
ATXN3-243ENST00000556671 SGIP1Q9BQI5 828 aa12.06□□□□□ -0.48
ATXN3-243ENST00000556671 LHX8Q68G74 356 aa12.04□□□□□ -0.48
ATXN3-243ENST00000556671 ATMINO43313 823 aaPredicted RBP12.03□□□□□ -0.48
ATXN3-243ENST00000556671 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
ATXN3-243ENST00000556671 TRPC6Q9Y210 931 aa12.02□□□□□ -0.49
ATXN3-243ENST00000556671 PCDHB13Q9Y5F0 798 aa12.02□□□□□ -0.49
ATXN3-243ENST00000556671 GSE1Q14687 1217 aa12□□□□□ -0.49
ATXN3-243ENST00000556671 TIE1P35590 1138 aa11.99□□□□□ -0.49
ATXN3-243ENST00000556671 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
ATXN3-243ENST00000556671 BMP2KQ9NSY1 1161 aaPredicted RBP11.98□□□□□ -0.49
ATXN3-243ENST00000556671 PYGBP11216 843 aa11.97□□□□□ -0.49
ATXN3-243ENST00000556671 ATN1P54259 1190 aaPredicted RBP11.97□□□□□ -0.49
ATXN3-243ENST00000556671 IFNL1Q8IU54 200 aa11.97□□□□□ -0.49
ATXN3-243ENST00000556671 SLC39A7Q92504 469 aa11.94□□□□□ -0.5
ATXN3-243ENST00000556671 TTLL13PA6NNM8 815 aa11.92□□□□□ -0.5
ATXN3-243ENST00000556671 C7P10643 843 aa11.91□□□□□ -0.5
ATXN3-243ENST00000556671 METRNQ9UJH8 293 aa11.91□□□□□ -0.5
ATXN3-243ENST00000556671 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
ATXN3-243ENST00000556671 POTEB2H3BUK9 544 aa11.87□□□□□ -0.51
ATXN3-243ENST00000556671 CIZ1Q9ULV3 898 aaPredicted RBP11.86□□□□□ -0.51
ATXN3-243ENST00000556671 PCDHB8Q9UN66 801 aa11.85□□□□□ -0.51
ATXN3-243ENST00000556671 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
ATXN3-243ENST00000556671 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
ATXN3-243ENST00000556671 ZNF467Q7Z7K2 595 aaPredicted RBP11.83□□□□□ -0.52
ATXN3-243ENST00000556671 POTEFA5A3E0 1075 aa11.8□□□□□ -0.52
ATXN3-243ENST00000556671 IER5LQ5T953 404 aa11.78□□□□□ -0.52
ATXN3-243ENST00000556671 OTUD5Q96G74 571 aa11.76□□□□□ -0.53
ATXN3-243ENST00000556671 POTEJP0CG39 1038 aa11.75□□□□□ -0.53
ATXN3-243ENST00000556671 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
ATXN3-243ENST00000556671 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
ATXN3-243ENST00000556671 SEC24BO95487 1268 aa11.72□□□□□ -0.53
ATXN3-243ENST00000556671 PSEN1P49768 467 aa11.7□□□□□ -0.54
ATXN3-243ENST00000556671 IRX5P78411 483 aaPredicted RBP11.68□□□□□ -0.54
ATXN3-243ENST00000556671 PDAP1Q13442 181 aaKnown RBP11.68□□□□□ -0.54
ATXN3-243ENST00000556671 MAMSTRQ6ZN01 415 aa11.67□□□□□ -0.54
ATXN3-243ENST00000556671 PLCG2P16885 1265 aa11.64□□□□□ -0.55
ATXN3-243ENST00000556671 SCUBE2Q9NQ36 999 aa11.63□□□□□ -0.55
ATXN3-243ENST00000556671 OCEL1Q9H607 264 aa11.62□□□□□ -0.55
ATXN3-243ENST00000556671 GOLGA2Q08379 1002 aa11.6□□□□□ -0.55
ATXN3-243ENST00000556671 MKRN3Q13064 507 aaKnown RBP11.6□□□□□ -0.55
ATXN3-243ENST00000556671 RNF25Q96BH1 459 aaPredicted RBP11.6□□□□□ -0.55
ATXN3-243ENST00000556671 RIOK3O14730 519 aaKnown RBP11.57□□□□□ -0.56
ATXN3-243ENST00000556671 CABP2Q9NPB3 220 aa11.56□□□□□ -0.56
ATXN3-243ENST00000556671 PDCD7Q8N8D1 485 aaKnown RBP11.55□□□□□ -0.56
ATXN3-243ENST00000556671 VGFO15240 615 aaPredicted RBP11.52□□□□□ -0.57
ATXN3-243ENST00000556671 ILDR1Q86SU0 546 aaPredicted RBP11.52□□□□□ -0.57
ATXN3-243ENST00000556671 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.52□□□□□ -0.573e-6■■□□□ 13.5
ATXN3-243ENST00000556671 PKD2Q13563 968 aa11.51□□□□□ -0.57
ATXN3-243ENST00000556671 ECM2O94769 699 aaPredicted RBP11.5□□□□□ -0.57
ATXN3-243ENST00000556671 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.49□□□□□ -0.57
ATXN3-243ENST00000556671 ZFP91Q96JP5 570 aaPredicted RBP11.49□□□□□ -0.57
ATXN3-243ENST00000556671 EFCAB3Q8N7B9 438 aa11.45□□□□□ -0.58
ATXN3-243ENST00000556671 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
ATXN3-243ENST00000556671 TAOK2Q9UL54 1235 aa11.44□□□□□ -0.58
ATXN3-243ENST00000556671 SLAIN1Q8ND83 568 aa11.43□□□□□ -0.58
ATXN3-243ENST00000556671 DPY19L2Q6NUT2 758 aa11.42□□□□□ -0.58
ATXN3-243ENST00000556671 RGL2O15211 777 aa11.41□□□□□ -0.58
ATXN3-243ENST00000556671 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.4□□□□□ -0.58
ATXN3-243ENST00000556671 SOX12O15370 315 aa11.38□□□□□ -0.59
ATXN3-243ENST00000556671 BCL11BQ9C0K0 894 aaPredicted RBP11.38□□□□□ -0.59
ATXN3-243ENST00000556671 LCE2DQ5TA82 110 aaPredicted RBP11.37□□□□□ -0.59
ATXN3-243ENST00000556671 C3orf67Q6ZVT6 689 aa11.36□□□□□ -0.59
ATXN3-243ENST00000556671 FAM163AQ96GL9 167 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-243ENST00000556671 BOLA1Q9Y3E2 137 aa11.35□□□□□ -0.59
ATXN3-243ENST00000556671 STK24Q9Y6E0 443 aa11.34□□□□□ -0.59
ATXN3-243ENST00000556671 STK25O00506 426 aa11.33□□□□□ -0.6
ATXN3-243ENST00000556671 PHF8Q9UPP1 1060 aa11.32□□□□□ -0.6
ATXN3-243ENST00000556671 POTEMA6NI47 508 aa11.31□□□□□ -0.6
ATXN3-243ENST00000556671 G3V3G9 751 aa11.31□□□□□ -0.6
ATXN3-243ENST00000556671 MS4A4AQ96JQ5 239 aa11.31□□□□□ -0.6
ATXN3-243ENST00000556671 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
ATXN3-243ENST00000556671 POTEGQ6S5H5 508 aa11.29□□□□□ -0.6
ATXN3-243ENST00000556671 NLRP6P59044 892 aa11.26□□□□□ -0.61
ATXN3-243ENST00000556671 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
ATXN3-243ENST00000556671 SNPHO15079 494 aa11.25□□□□□ -0.61
ATXN3-243ENST00000556671 MFRPQ9BY79 579 aa11.25□□□□□ -0.61
ATXN3-243ENST00000556671 ST18O60284 1047 aa11.24□□□□□ -0.61
ATXN3-243ENST00000556671 MICALL2Q8IY33 904 aa11.24□□□□□ -0.61
ATXN3-243ENST00000556671 HS6ST3Q8IZP7 471 aa11.18□□□□□ -0.62
ATXN3-243ENST00000556671 TMEM92Q6UXU6 159 aa11.15□□□□□ -0.62
ATXN3-243ENST00000556671 PCDH10Q9P2E7 1040 aa11.14□□□□□ -0.63
ATXN3-243ENST00000556671 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
ATXN3-243ENST00000556671 HOXB3P14651 431 aaPredicted RBP11.11□□□□□ -0.63
ATXN3-243ENST00000556671 DNAJC5Q9H3Z4 198 aa11.09□□□□□ -0.63
ATXN3-243ENST00000556671 PPP1R37O75864 691 aa11.06□□□□□ -0.64
ATXN3-243ENST00000556671 MARVELD3Q96A59 401 aa11.06□□□□□ -0.64
ATXN3-243ENST00000556671 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
ATXN3-243ENST00000556671 CDAN1Q8IWY9 1227 aa11.04□□□□□ -0.64
ATXN3-243ENST00000556671 KIF3CO14782 793 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms