RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 RNF25Q96BH1 459 aaPredicted RBP11.87□□□□□ -0.51
PCNX1-212ENST00000556516 PYGBP11216 843 aa11.86□□□□□ -0.51
PCNX1-212ENST00000556516 TRIM41Q8WV44 630 aa11.81□□□□□ -0.52
PCNX1-212ENST00000556516 SLC24A1O60721 1099 aa11.79□□□□□ -0.52
PCNX1-212ENST00000556516 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
PCNX1-212ENST00000556516 RIOK3O14730 519 aaKnown RBP11.73□□□□□ -0.53
PCNX1-212ENST00000556516 CCDC61Q9Y6R9 512 aa11.73□□□□□ -0.53
PCNX1-212ENST00000556516 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.53
PCNX1-212ENST00000556516 CD44P16070 742 aaKnown RBP11.7□□□□□ -0.54
PCNX1-212ENST00000556516 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
PCNX1-212ENST00000556516 PLCB2Q00722 1185 aa11.68□□□□□ -0.54
PCNX1-212ENST00000556516 ZRANB1Q9UGI0 708 aa11.68□□□□□ -0.54
PCNX1-212ENST00000556516 PCDHB8Q9UN66 801 aa11.67□□□□□ -0.54
PCNX1-212ENST00000556516 PCDHB13Q9Y5F0 798 aa11.67□□□□□ -0.54
PCNX1-212ENST00000556516 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.54
PCNX1-212ENST00000556516 PHF12Q96QT6 1004 aa11.65□□□□□ -0.54
PCNX1-212ENST00000556516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
PCNX1-212ENST00000556516 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
PCNX1-212ENST00000556516 STK25O00506 426 aa11.63□□□□□ -0.55
PCNX1-212ENST00000556516 HS6ST3Q8IZP7 471 aa11.63□□□□□ -0.55
PCNX1-212ENST00000556516 VGFO15240 615 aaPredicted RBP11.62□□□□□ -0.55
PCNX1-212ENST00000556516 MAP3K13O43283 966 aa11.62□□□□□ -0.55
PCNX1-212ENST00000556516 PAXIP1Q6ZW49 1069 aaPredicted RBP11.62□□□□□ -0.55
PCNX1-212ENST00000556516 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
PCNX1-212ENST00000556516 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
PCNX1-212ENST00000556516 KIF12Q96FN5 646 aa11.59□□□□□ -0.55
PCNX1-212ENST00000556516 BCL11BQ9C0K0 894 aaPredicted RBP11.59□□□□□ -0.55
PCNX1-212ENST00000556516 C19orf67A6NJJ6 358 aa11.58□□□□□ -0.56
PCNX1-212ENST00000556516 HAP1P54257 671 aaPredicted RBP11.58□□□□□ -0.56
PCNX1-212ENST00000556516 IFNL1Q8IU54 200 aa11.58□□□□□ -0.56
PCNX1-212ENST00000556516 STK24Q9Y6E0 443 aa11.58□□□□□ -0.56
PCNX1-212ENST00000556516 NKX1-1Q15270 411 aaPredicted RBP11.56□□□□□ -0.56
PCNX1-212ENST00000556516 ZNF467Q7Z7K2 595 aaPredicted RBP11.56□□□□□ -0.56
PCNX1-212ENST00000556516 TAOK2Q9UL54 1235 aa11.55□□□□□ -0.56
PCNX1-212ENST00000556516 EVX2Q03828 476 aa11.54□□□□□ -0.56
PCNX1-212ENST00000556516 HAX1O00165 279 aa11.53□□□□□ -0.56
PCNX1-212ENST00000556516 ZNF579Q8NAF0 562 aaKnown RBP11.53□□□□□ -0.56
PCNX1-212ENST00000556516 PDAP1Q13442 181 aaKnown RBP11.51□□□□□ -0.57
PCNX1-212ENST00000556516 PSEN1P49768 467 aa11.5□□□□□ -0.57
PCNX1-212ENST00000556516 SPRYD3Q8NCJ5 442 aa11.5□□□□□ -0.57
PCNX1-212ENST00000556516 SGIP1Q9BQI5 828 aa11.5□□□□□ -0.57
PCNX1-212ENST00000556516 MS4A3Q96HJ5 214 aa11.49□□□□□ -0.57
PCNX1-212ENST00000556516 TRPC6Q9Y210 931 aa11.49□□□□□ -0.57
PCNX1-212ENST00000556516 DNAJC5Q9H3Z4 198 aa11.45□□□□□ -0.58
PCNX1-212ENST00000556516 GTPBP6O43824 516 aaPredicted RBP11.43□□□□□ -0.58
PCNX1-212ENST00000556516 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
PCNX1-212ENST00000556516 CABP2Q9NPB3 220 aa11.41□□□□□ -0.58
PCNX1-212ENST00000556516 GALR2O43603 387 aaPredicted RBP11.4□□□□□ -0.58
PCNX1-212ENST00000556516 POTEHQ6S545 545 aa11.4□□□□□ -0.58
PCNX1-212ENST00000556516 EFCAB3Q8N7B9 438 aa11.37□□□□□ -0.59
PCNX1-212ENST00000556516 TMEM106CQ9BVX2 250 aa11.37□□□□□ -0.59
PCNX1-212ENST00000556516 MFRPQ9BY79 579 aa11.34□□□□□ -0.59
PCNX1-212ENST00000556516 KDM2AQ9Y2K7 1162 aa11.34□□□□□ -0.59
PCNX1-212ENST00000556516 PHF8Q9UPP1 1060 aa11.31□□□□□ -0.6
PCNX1-212ENST00000556516 BMP2KQ9NSY1 1161 aaPredicted RBP11.3□□□□□ -0.6
PCNX1-212ENST00000556516 TTLL13PA6NNM8 815 aa11.29□□□□□ -0.6
PCNX1-212ENST00000556516 VSIG10Q8N0Z9 540 aa11.27□□□□□ -0.61
PCNX1-212ENST00000556516 PPP1R37O75864 691 aa11.25□□□□□ -0.61
PCNX1-212ENST00000556516 TIE1P35590 1138 aa11.25□□□□□ -0.61
PCNX1-212ENST00000556516 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
PCNX1-212ENST00000556516 GABBR2O75899 941 aa11.24□□□□□ -0.61
PCNX1-212ENST00000556516 FBXO22Q8NEZ5 403 aa11.24□□□□□ -0.61
PCNX1-212ENST00000556516 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
PCNX1-212ENST00000556516 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
PCNX1-212ENST00000556516 ATN1P54259 1190 aaPredicted RBP11.21□□□□□ -0.61
PCNX1-212ENST00000556516 NLRP6P59044 892 aa11.21□□□□□ -0.61
PCNX1-212ENST00000556516 MS4A4AQ96JQ5 239 aa11.21□□□□□ -0.61
PCNX1-212ENST00000556516 SOX12O15370 315 aa11.2□□□□□ -0.62
PCNX1-212ENST00000556516 MKRN3Q13064 507 aaKnown RBP11.2□□□□□ -0.62
PCNX1-212ENST00000556516 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
PCNX1-212ENST00000556516 ATMINO43313 823 aaPredicted RBP11.17□□□□□ -0.62
PCNX1-212ENST00000556516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.14□□□□□ -0.639e-7■■■□□ 15.5
PCNX1-212ENST00000556516 CLCN6P51797 869 aa11.13□□□□□ -0.63
PCNX1-212ENST00000556516 ASTLQ6HA08 431 aaPredicted RBP11.13□□□□□ -0.63
PCNX1-212ENST00000556516 PELP1Q8IZL8 1130 aaKnown RBP11.12□□□□□ -0.63
PCNX1-212ENST00000556516 DPY19L2Q6NUT2 758 aa11.11□□□□□ -0.63
PCNX1-212ENST00000556516 DCBLD2Q96PD2 775 aa11.09□□□□□ -0.63
PCNX1-212ENST00000556516 SP7Q8TDD2 431 aaPredicted RBP11.08□□□□□ -0.64
PCNX1-212ENST00000556516 POTEIP0CG38 1075 aa11.05□□□□□ -0.64
PCNX1-212ENST00000556516 PDCD7Q8N8D1 485 aaKnown RBP11.05□□□□□ -0.64
PCNX1-212ENST00000556516 IRX5P78411 483 aaPredicted RBP11.04□□□□□ -0.64
PCNX1-212ENST00000556516 ILDR1Q86SU0 546 aaPredicted RBP11.04□□□□□ -0.64
PCNX1-212ENST00000556516 COLQQ9Y215 455 aaPredicted RBP11.01□□□□□ -0.65
PCNX1-212ENST00000556516 NCKAP5LQ9HCH0 1330 aa11□□□□□ -0.65
PCNX1-212ENST00000556516 PLCG2P16885 1265 aa10.98□□□□□ -0.65
PCNX1-212ENST00000556516 IER5LQ5T953 404 aa10.98□□□□□ -0.65
PCNX1-212ENST00000556516 OCEL1Q9H607 264 aa10.98□□□□□ -0.65
PCNX1-212ENST00000556516 BCANQ96GW7 911 aa10.97□□□□□ -0.65
PCNX1-212ENST00000556516 POTEFA5A3E0 1075 aa10.96□□□□□ -0.65
PCNX1-212ENST00000556516 SEC24BO95487 1268 aa10.96□□□□□ -0.65
PCNX1-212ENST00000556516 MICALL2Q8IY33 904 aa10.96□□□□□ -0.65
PCNX1-212ENST00000556516 WDR70Q9NW82 654 aa10.96□□□□□ -0.65
PCNX1-212ENST00000556516 METRNQ9UJH8 293 aa10.95□□□□□ -0.66
PCNX1-212ENST00000556516 LARP6Q9BRS8 491 aaKnown RBP10.94□□□□□ -0.66
PCNX1-212ENST00000556516 KCNV2Q8TDN2 545 aa10.93□□□□□ -0.66
PCNX1-212ENST00000556516 SLC39A7Q92504 469 aa10.92□□□□□ -0.66
PCNX1-212ENST00000556516 CRISPLD2Q9H0B8 497 aa10.91□□□□□ -0.66
PCNX1-212ENST00000556516 BOLA1Q9Y3E2 137 aa10.91□□□□□ -0.66
PCNX1-212ENST00000556516 C7P10643 843 aa10.88□□□□□ -0.67
PCNX1-212ENST00000556516 PDE4AP27815 886 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms