RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 FXR2P51116 673 aaKnown RBP eCLIP10.41□□□□□ -0.74
TDP1-215ENST00000556498 RASEFQ8IZ41 740 aa10.41□□□□□ -0.74
TDP1-215ENST00000556498 FAM212AQ96EL1 285 aa10.41□□□□□ -0.74
TDP1-215ENST00000556498 CHRDL2Q6WN34 429 aa10.39□□□□□ -0.75
TDP1-215ENST00000556498 PRKAR2AP13861 404 aaKnown RBP10.38□□□□□ -0.75
TDP1-215ENST00000556498 FARP1Q9Y4F1 1045 aaPredicted RBP10.38□□□□□ -0.75
TDP1-215ENST00000556498 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
TDP1-215ENST00000556498 PLCB2Q00722 1185 aa10.33□□□□□ -0.76
TDP1-215ENST00000556498 PIP4P2Q8N4L2 257 aa10.32□□□□□ -0.76
TDP1-215ENST00000556498 RNF25Q96BH1 459 aaPredicted RBP10.32□□□□□ -0.76
TDP1-215ENST00000556498 BBXQ8WY36 941 aaPredicted RBP10.3□□□□□ -0.76
TDP1-215ENST00000556498 RIOK3O14730 519 aaKnown RBP10.27□□□□□ -0.77
TDP1-215ENST00000556498 CHGAP10645 457 aaKnown RBP10.27□□□□□ -0.77
TDP1-215ENST00000556498 PYGBP11216 843 aa10.26□□□□□ -0.77
TDP1-215ENST00000556498 TSPYL2Q9H2G4 693 aaPredicted RBP10.26□□□□□ -0.77
TDP1-215ENST00000556498 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.25□□□□□ -0.77
TDP1-215ENST00000556498 TAOK2Q9UL54 1235 aa10.24□□□□□ -0.77
TDP1-215ENST00000556498 HS6ST3Q8IZP7 471 aa10.22□□□□□ -0.77
TDP1-215ENST00000556498 VGFO15240 615 aaPredicted RBP10.19□□□□□ -0.78
TDP1-215ENST00000556498 CCDC61Q9Y6R9 512 aa10.19□□□□□ -0.78
TDP1-215ENST00000556498 PAXIP1Q6ZW49 1069 aaPredicted RBP10.17□□□□□ -0.78
TDP1-215ENST00000556498 SGIP1Q9BQI5 828 aa10.17□□□□□ -0.78
TDP1-215ENST00000556498 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
TDP1-215ENST00000556498 PAK3O75914 559 aaPredicted RBP10.16□□□□□ -0.78
TDP1-215ENST00000556498 HAP1P54257 671 aaPredicted RBP10.15□□□□□ -0.78
TDP1-215ENST00000556498 SPRYD3Q8NCJ5 442 aa10.14□□□□□ -0.79
TDP1-215ENST00000556498 CFAP44Q96MT7 982 aa10.14□□□□□ -0.79
TDP1-215ENST00000556498 STK25O00506 426 aa10.13□□□□□ -0.79
TDP1-215ENST00000556498 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.12□□□□□ -0.79
TDP1-215ENST00000556498 ZNF467Q7Z7K2 595 aaPredicted RBP10.12□□□□□ -0.79
TDP1-215ENST00000556498 ZFP91Q96JP5 570 aaPredicted RBP10.12□□□□□ -0.79
TDP1-215ENST00000556498 CD44P16070 742 aaKnown RBP10.09□□□□□ -0.79
TDP1-215ENST00000556498 NKX1-1Q15270 411 aaPredicted RBP10.09□□□□□ -0.79
TDP1-215ENST00000556498 BCL11BQ9C0K0 894 aaPredicted RBP10.09□□□□□ -0.79
TDP1-215ENST00000556498 PCDHB8Q9UN66 801 aa10.09□□□□□ -0.79
TDP1-215ENST00000556498 PCDHB13Q9Y5F0 798 aa10.09□□□□□ -0.79
TDP1-215ENST00000556498 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
TDP1-215ENST00000556498 KIF12Q96FN5 646 aa10.08□□□□□ -0.8
TDP1-215ENST00000556498 ZRANB1Q9UGI0 708 aa10.08□□□□□ -0.8
TDP1-215ENST00000556498 STK24Q9Y6E0 443 aa10.07□□□□□ -0.8
TDP1-215ENST00000556498 MAP3K13O43283 966 aa10.06□□□□□ -0.8
TDP1-215ENST00000556498 PDAP1Q13442 181 aaKnown RBP10.06□□□□□ -0.8
TDP1-215ENST00000556498 IFNL1Q8IU54 200 aa10.04□□□□□ -0.8
TDP1-215ENST00000556498 VSIG10Q8N0Z9 540 aa10.04□□□□□ -0.8
TDP1-215ENST00000556498 C19orf67A6NJJ6 358 aa10.03□□□□□ -0.8
TDP1-215ENST00000556498 GTPBP6O43824 516 aaPredicted RBP10.02□□□□□ -0.81
TDP1-215ENST00000556498 PSEN1P49768 467 aa10.02□□□□□ -0.81
TDP1-215ENST00000556498 EIF5BO60841 1220 aaKnown RBP10.01□□□□□ -0.81
TDP1-215ENST00000556498 PHF12Q96QT6 1004 aa10□□□□□ -0.81
TDP1-215ENST00000556498 TSHZ2Q9NRE2 1034 aa10□□□□□ -0.81
TDP1-215ENST00000556498 ARXQ96QS3 562 aa9.99□□□□□ -0.81
TDP1-215ENST00000556498 RANGAP1P46060 587 aaPredicted RBP9.98□□□□□ -0.81
TDP1-215ENST00000556498 KDM2AQ9Y2K7 1162 aa9.97□□□□□ -0.81
TDP1-215ENST00000556498 RYDENQ9NUL5 291 aaKnown RBP9.96□□□□□ -0.82
TDP1-215ENST00000556498 BCL11AQ9H165 835 aa9.94□□□□□ -0.82
TDP1-215ENST00000556498 HAX1O00165 279 aa9.91□□□□□ -0.82
TDP1-215ENST00000556498 MS4A3Q96HJ5 214 aa9.9□□□□□ -0.82
TDP1-215ENST00000556498 MFRPQ9BY79 579 aa9.88□□□□□ -0.83
TDP1-215ENST00000556498 CABP2Q9NPB3 220 aa9.88□□□□□ -0.83
TDP1-215ENST00000556498 EVX2Q03828 476 aa9.87□□□□□ -0.83
TDP1-215ENST00000556498 EFCAB3Q8N7B9 438 aa9.87□□□□□ -0.83
TDP1-215ENST00000556498 TRPC6Q9Y210 931 aa9.86□□□□□ -0.83
TDP1-215ENST00000556498 SOX12O15370 315 aa9.85□□□□□ -0.83
TDP1-215ENST00000556498 TMEM106CQ9BVX2 250 aa9.85□□□□□ -0.83
TDP1-215ENST00000556498 CLCN6P51797 869 aa9.83□□□□□ -0.84
TDP1-215ENST00000556498 NLRP6P59044 892 aa9.82□□□□□ -0.84
TDP1-215ENST00000556498 FBXO22Q8NEZ5 403 aa9.82□□□□□ -0.84
TDP1-215ENST00000556498 TIE1P35590 1138 aa9.81□□□□□ -0.84
TDP1-215ENST00000556498 GALR2O43603 387 aaPredicted RBP9.8□□□□□ -0.84
TDP1-215ENST00000556498 PHF8Q9UPP1 1060 aa9.8□□□□□ -0.84
TDP1-215ENST00000556498 TTLL13PA6NNM8 815 aa9.78□□□□□ -0.84
TDP1-215ENST00000556498 GOLGA2Q08379 1002 aa9.78□□□□□ -0.84
TDP1-215ENST00000556498 BMP2KQ9NSY1 1161 aaPredicted RBP9.77□□□□□ -0.85
TDP1-215ENST00000556498 PPP1R37O75864 691 aa9.76□□□□□ -0.85
TDP1-215ENST00000556498 BCANQ96GW7 911 aa9.76□□□□□ -0.85
TDP1-215ENST00000556498 MKRN3Q13064 507 aaKnown RBP9.74□□□□□ -0.85
TDP1-215ENST00000556498 POTEHQ6S545 545 aa9.74□□□□□ -0.85
TDP1-215ENST00000556498 MS4A4AQ96JQ5 239 aa9.74□□□□□ -0.85
TDP1-215ENST00000556498 CADPS2Q86UW7 1296 aa9.73□□□□□ -0.85
TDP1-215ENST00000556498 TRIM35Q9UPQ4 493 aa9.71□□□□□ -0.86
TDP1-215ENST00000556498 ILDR1Q86SU0 546 aaPredicted RBP9.7□□□□□ -0.86
TDP1-215ENST00000556498 GABBR2O75899 941 aa9.68□□□□□ -0.86
TDP1-215ENST00000556498 ATMINO43313 823 aaPredicted RBP9.67□□□□□ -0.86
TDP1-215ENST00000556498 ATN1P54259 1190 aaPredicted RBP9.67□□□□□ -0.86
TDP1-215ENST00000556498 ASTLQ6HA08 431 aaPredicted RBP9.67□□□□□ -0.86
TDP1-215ENST00000556498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.67□□□□□ -0.867e-6■■□□□ 12.8
TDP1-215ENST00000556498 FAM9AQ8IZU1 332 aaPredicted RBP9.66□□□□□ -0.86
TDP1-215ENST00000556498 CENPBP07199 599 aaPredicted RBP9.65□□□□□ -0.86
TDP1-215ENST00000556498 WDR70Q9NW82 654 aa9.64□□□□□ -0.87
TDP1-215ENST00000556498 HOMEZQ8IX15 550 aa9.63□□□□□ -0.87
TDP1-215ENST00000556498 IER5LQ5T953 404 aa9.61□□□□□ -0.87
TDP1-215ENST00000556498 IRX5P78411 483 aaPredicted RBP9.59□□□□□ -0.87
TDP1-215ENST00000556498 DPY19L2Q6NUT2 758 aa9.59□□□□□ -0.87
TDP1-215ENST00000556498 NCKAP5LQ9HCH0 1330 aa9.58□□□□□ -0.88
TDP1-215ENST00000556498 NBR1Q14596 966 aa9.58□□□□□ -0.88
TDP1-215ENST00000556498 PDCD7Q8N8D1 485 aaKnown RBP9.58□□□□□ -0.88
TDP1-215ENST00000556498 DCBLD2Q96PD2 775 aa9.58□□□□□ -0.88
TDP1-215ENST00000556498 OCEL1Q9H607 264 aa9.58□□□□□ -0.88
TDP1-215ENST00000556498 PDE4AP27815 886 aa9.57□□□□□ -0.88
TDP1-215ENST00000556498 P3H3Q8IVL6 736 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms