RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 PHF12Q96QT6 1004 aa10.52□□□□□ -0.73
ATXN3-241ENST00000556374 SGIP1Q9BQI5 828 aa10.5□□□□□ -0.73
ATXN3-241ENST00000556374 TSPYL2Q9H2G4 693 aaPredicted RBP10.5□□□□□ -0.73
ATXN3-241ENST00000556374 NUBP1P53384 320 aa10.48□□□□□ -0.73
ATXN3-241ENST00000556374 RASEFQ8IZ41 740 aa10.47□□□□□ -0.73
ATXN3-241ENST00000556374 KIF12Q96FN5 646 aa10.46□□□□□ -0.73
ATXN3-241ENST00000556374 VASPP50552 380 aaPredicted RBP10.44□□□□□ -0.74
ATXN3-241ENST00000556374 ASTLQ6HA08 431 aaPredicted RBP10.44□□□□□ -0.74
ATXN3-241ENST00000556374 FAM212AQ96EL1 285 aa10.44□□□□□ -0.74
ATXN3-241ENST00000556374 OTUD5Q96G74 571 aa10.44□□□□□ -0.74
ATXN3-241ENST00000556374 POTEB2H3BUK9 544 aa10.43□□□□□ -0.74
ATXN3-241ENST00000556374 MS4A3Q96HJ5 214 aa10.43□□□□□ -0.74
ATXN3-241ENST00000556374 TIE1P35590 1138 aa10.38□□□□□ -0.75
ATXN3-241ENST00000556374 PELP1Q8IZL8 1130 aaKnown RBP10.38□□□□□ -0.75
ATXN3-241ENST00000556374 MAP3K13O43283 966 aa10.36□□□□□ -0.75
ATXN3-241ENST00000556374 ATMINO43313 823 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-241ENST00000556374 SLC39A7Q92504 469 aa10.36□□□□□ -0.75
ATXN3-241ENST00000556374 C7P10643 843 aa10.35□□□□□ -0.75
ATXN3-241ENST00000556374 GSE1Q14687 1217 aa10.34□□□□□ -0.75
ATXN3-241ENST00000556374 POTEMA6NI47 508 aa10.32□□□□□ -0.76
ATXN3-241ENST00000556374 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
ATXN3-241ENST00000556374 KLHL34Q8N239 644 aa10.31□□□□□ -0.76
ATXN3-241ENST00000556374 PCDHB13Q9Y5F0 798 aa10.3□□□□□ -0.76
ATXN3-241ENST00000556374 DCAF8Q5TAQ9 597 aa10.29□□□□□ -0.76
ATXN3-241ENST00000556374 POTEGQ6S5H5 508 aa10.29□□□□□ -0.76
ATXN3-241ENST00000556374 CHRM1P11229 460 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-241ENST00000556374 BMP2KQ9NSY1 1161 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-241ENST00000556374 ATN1P54259 1190 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-241ENST00000556374 IER5LQ5T953 404 aa10.24□□□□□ -0.77
ATXN3-241ENST00000556374 SPOCK2Q92563 424 aa10.24□□□□□ -0.77
ATXN3-241ENST00000556374 TTLL13PA6NNM8 815 aa10.23□□□□□ -0.77
ATXN3-241ENST00000556374 IFNL1Q8IU54 200 aa10.23□□□□□ -0.77
ATXN3-241ENST00000556374 POTEJP0CG39 1038 aa10.22□□□□□ -0.77
ATXN3-241ENST00000556374 IFNLR1Q8IU57 520 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-241ENST00000556374 MAMSTRQ6ZN01 415 aa10.21□□□□□ -0.77
ATXN3-241ENST00000556374 ZNF467Q7Z7K2 595 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-241ENST00000556374 TRPC6Q9Y210 931 aa10.2□□□□□ -0.78
ATXN3-241ENST00000556374 TRIM41Q8WV44 630 aa10.18□□□□□ -0.78
ATXN3-241ENST00000556374 PYGBP11216 843 aa10.17□□□□□ -0.78
ATXN3-241ENST00000556374 FAM163AQ96GL9 167 aaPredicted RBP10.17□□□□□ -0.78
ATXN3-241ENST00000556374 SCUBE2Q9NQ36 999 aa10.15□□□□□ -0.78
ATXN3-241ENST00000556374 TRIM35Q9UPQ4 493 aa10.15□□□□□ -0.78
ATXN3-241ENST00000556374 TMEM106CQ9BVX2 250 aa10.14□□□□□ -0.79
ATXN3-241ENST00000556374 SEC24BO95487 1268 aa10.1□□□□□ -0.79
ATXN3-241ENST00000556374 POTEFA5A3E0 1075 aa10.09□□□□□ -0.79
ATXN3-241ENST00000556374 LCE2DQ5TA82 110 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-241ENST00000556374 PCDH10Q9P2E7 1040 aa10.07□□□□□ -0.8
ATXN3-241ENST00000556374 CIZ1Q9ULV3 898 aaPredicted RBP10.06□□□□□ -0.8
ATXN3-241ENST00000556374 PCDHB8Q9UN66 801 aa10.06□□□□□ -0.8
ATXN3-241ENST00000556374 IRX5P78411 483 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-241ENST00000556374 PDAP1Q13442 181 aaKnown RBP10.03□□□□□ -0.8
ATXN3-241ENST00000556374 OCEL1Q9H607 264 aa10.03□□□□□ -0.8
ATXN3-241ENST00000556374 COLQQ9Y215 455 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-241ENST00000556374 PLCG2P16885 1265 aa10.02□□□□□ -0.81
ATXN3-241ENST00000556374 PSEN1P49768 467 aa10.01□□□□□ -0.81
ATXN3-241ENST00000556374 GOLGA2Q08379 1002 aa9.98□□□□□ -0.81
ATXN3-241ENST00000556374 MKRN3Q13064 507 aaKnown RBP9.98□□□□□ -0.81
ATXN3-241ENST00000556374 ILDR1Q86SU0 546 aaPredicted RBP9.95□□□□□ -0.82
ATXN3-241ENST00000556374 L3MBTL3Q96JM7 780 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-241ENST00000556374 TAOK2Q9UL54 1235 aa9.93□□□□□ -0.82
ATXN3-241ENST00000556374 CDAN1Q8IWY9 1227 aa9.9□□□□□ -0.82
ATXN3-241ENST00000556374 SLAIN1Q8ND83 568 aa9.9□□□□□ -0.82
ATXN3-241ENST00000556374 RIOK3O14730 519 aaKnown RBP9.89□□□□□ -0.83
ATXN3-241ENST00000556374 PDCD7Q8N8D1 485 aaKnown RBP9.89□□□□□ -0.83
ATXN3-241ENST00000556374 VGFO15240 615 aaPredicted RBP9.87□□□□□ -0.83
ATXN3-241ENST00000556374 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.87□□□□□ -0.833e-6■■□□□ 13.5
ATXN3-241ENST00000556374 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.86□□□□□ -0.83
ATXN3-241ENST00000556374 CABP2Q9NPB3 220 aa9.84□□□□□ -0.83
ATXN3-241ENST00000556374 SNPHO15079 494 aa9.83□□□□□ -0.84
ATXN3-241ENST00000556374 ST18O60284 1047 aa9.83□□□□□ -0.84
ATXN3-241ENST00000556374 SOX12O15370 315 aa9.82□□□□□ -0.84
ATXN3-241ENST00000556374 RNF25Q96BH1 459 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-241ENST00000556374 C3orf67Q6ZVT6 689 aa9.79□□□□□ -0.84
ATXN3-241ENST00000556374 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-241ENST00000556374 G3V3G9 751 aa9.76□□□□□ -0.85
ATXN3-241ENST00000556374 ZFP91Q96JP5 570 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-241ENST00000556374 EFCAB3Q8N7B9 438 aa9.75□□□□□ -0.85
ATXN3-241ENST00000556374 TMEM121BQ9BXQ6 578 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-241ENST00000556374 BOLA1Q9Y3E2 137 aa9.75□□□□□ -0.85
ATXN3-241ENST00000556374 ECM2O94769 699 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-241ENST00000556374 PKD2Q13563 968 aa9.71□□□□□ -0.86
ATXN3-241ENST00000556374 MARVELD3Q96A59 401 aa9.69□□□□□ -0.86
ATXN3-241ENST00000556374 DPY19L2Q6NUT2 758 aa9.68□□□□□ -0.86
ATXN3-241ENST00000556374 NLRP6P59044 892 aa9.67□□□□□ -0.86
ATXN3-241ENST00000556374 BCL11BQ9C0K0 894 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-241ENST00000556374 MMRN1Q13201 1228 aa9.64□□□□□ -0.87
ATXN3-241ENST00000556374 SPNS2Q8IVW8 549 aa9.64□□□□□ -0.87
ATXN3-241ENST00000556374 STK25O00506 426 aa9.63□□□□□ -0.87
ATXN3-241ENST00000556374 STK24Q9Y6E0 443 aa9.63□□□□□ -0.87
ATXN3-241ENST00000556374 MS4A4AQ96JQ5 239 aa9.62□□□□□ -0.87
ATXN3-241ENST00000556374 PHF8Q9UPP1 1060 aa9.62□□□□□ -0.87
ATXN3-241ENST00000556374 RGL2O15211 777 aa9.61□□□□□ -0.87
ATXN3-241ENST00000556374 MICALL2Q8IY33 904 aa9.61□□□□□ -0.87
ATXN3-241ENST00000556374 FBXO22Q8NEZ5 403 aa9.61□□□□□ -0.87
ATXN3-241ENST00000556374 EMP3P54852 163 aa9.58□□□□□ -0.88
ATXN3-241ENST00000556374 DOK7Q18PE1 504 aa9.57□□□□□ -0.88
ATXN3-241ENST00000556374 MFRPQ9BY79 579 aa9.57□□□□□ -0.88
ATXN3-241ENST00000556374 ZSWIM6Q9HCJ5 1215 aa9.57□□□□□ -0.88
ATXN3-241ENST00000556374 DNAJC5Q9H3Z4 198 aa9.55□□□□□ -0.88
ATXN3-241ENST00000556374 RIMBP2O15034 1052 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms