RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 PLEKHG5O94827 1062 aa10.68□□□□□ -0.7
CDKN3-210ENST00000556305 PLCD3Q8N3E9 789 aa10.68□□□□□ -0.7
CDKN3-210ENST00000556305 POTEGQ6S5H5 508 aa10.63□□□□□ -0.71
CDKN3-210ENST00000556305 SPOCK2Q92563 424 aa10.63□□□□□ -0.71
CDKN3-210ENST00000556305 CREBZFQ9NS37 354 aa10.63□□□□□ -0.71
CDKN3-210ENST00000556305 MIER1Q8N108 512 aa10.62□□□□□ -0.71
CDKN3-210ENST00000556305 ZBTB47Q9UFB7 747 aaPredicted RBP10.62□□□□□ -0.71
CDKN3-210ENST00000556305 PCDH10Q9P2E7 1040 aa10.56□□□□□ -0.72
CDKN3-210ENST00000556305 DCAF8L2P0C7V8 631 aa10.54□□□□□ -0.72
CDKN3-210ENST00000556305 PELP1Q8IZL8 1130 aaKnown RBP10.54□□□□□ -0.72
CDKN3-210ENST00000556305 PHF12Q96QT6 1004 aa10.52□□□□□ -0.73
CDKN3-210ENST00000556305 PKD2Q13563 968 aa10.49□□□□□ -0.73
CDKN3-210ENST00000556305 PAK3O75914 559 aaPredicted RBP10.48□□□□□ -0.73
CDKN3-210ENST00000556305 POTEJP0CG39 1038 aa10.47□□□□□ -0.73
CDKN3-210ENST00000556305 ASTLQ6HA08 431 aaPredicted RBP10.47□□□□□ -0.73
CDKN3-210ENST00000556305 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
CDKN3-210ENST00000556305 ECM2O94769 699 aaPredicted RBP10.45□□□□□ -0.74
CDKN3-210ENST00000556305 METRNQ9UJH8 293 aa10.45□□□□□ -0.74
CDKN3-210ENST00000556305 MNX1P50219 401 aaPredicted RBP10.42□□□□□ -0.74
CDKN3-210ENST00000556305 C7P10643 843 aa10.41□□□□□ -0.74
CDKN3-210ENST00000556305 SLC39A7Q92504 469 aa10.41□□□□□ -0.74
CDKN3-210ENST00000556305 ATMINO43313 823 aaPredicted RBP10.4□□□□□ -0.74
CDKN3-210ENST00000556305 CIZ1Q9ULV3 898 aaPredicted RBP10.4□□□□□ -0.74
CDKN3-210ENST00000556305 MAMSTRQ6ZN01 415 aa10.39□□□□□ -0.75
CDKN3-210ENST00000556305 TRIM41Q8WV44 630 aa10.39□□□□□ -0.75
CDKN3-210ENST00000556305 MS4A3Q96HJ5 214 aa10.39□□□□□ -0.75
CDKN3-210ENST00000556305 NPM1P06748 294 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDKN3-210ENST00000556305 GSE1Q14687 1217 aa10.35□□□□□ -0.75
CDKN3-210ENST00000556305 PLCB2Q00722 1185 aa10.33□□□□□ -0.76
CDKN3-210ENST00000556305 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.31□□□□□ -0.76
CDKN3-210ENST00000556305 SCUBE2Q9NQ36 999 aa10.29□□□□□ -0.76
CDKN3-210ENST00000556305 FAM212AQ96EL1 285 aa10.27□□□□□ -0.77
CDKN3-210ENST00000556305 FAM163AQ96GL9 167 aaPredicted RBP10.27□□□□□ -0.77
CDKN3-210ENST00000556305 RGL2O15211 777 aa10.26□□□□□ -0.77
CDKN3-210ENST00000556305 ATN1P54259 1190 aaPredicted RBP10.26□□□□□ -0.77
CDKN3-210ENST00000556305 BBXQ8WY36 941 aaPredicted RBP10.26□□□□□ -0.77
CDKN3-210ENST00000556305 POTEFA5A3E0 1075 aa10.25□□□□□ -0.77
CDKN3-210ENST00000556305 DCAF8Q5TAQ9 597 aa10.25□□□□□ -0.77
CDKN3-210ENST00000556305 TAOK2Q9UL54 1235 aa10.25□□□□□ -0.77
CDKN3-210ENST00000556305 NUBP1P53384 320 aa10.23□□□□□ -0.77
CDKN3-210ENST00000556305 HAP1P54257 671 aaPredicted RBP10.22□□□□□ -0.77
CDKN3-210ENST00000556305 CCDC61Q9Y6R9 512 aa10.22□□□□□ -0.77
CDKN3-210ENST00000556305 BMP2KQ9NSY1 1161 aaPredicted RBP10.17□□□□□ -0.78
CDKN3-210ENST00000556305 CHGAP10645 457 aaKnown RBP10.16□□□□□ -0.78
CDKN3-210ENST00000556305 KIF12Q96FN5 646 aa10.16□□□□□ -0.78
CDKN3-210ENST00000556305 CDAN1Q8IWY9 1227 aa10.15□□□□□ -0.78
CDKN3-210ENST00000556305 TSPYL2Q9H2G4 693 aaPredicted RBP10.14□□□□□ -0.79
CDKN3-210ENST00000556305 TRPC6Q9Y210 931 aa10.14□□□□□ -0.79
CDKN3-210ENST00000556305 TIE1P35590 1138 aa10.13□□□□□ -0.79
CDKN3-210ENST00000556305 RIOK3O14730 519 aaKnown RBP10.12□□□□□ -0.79
CDKN3-210ENST00000556305 PAXIP1Q6ZW49 1069 aaPredicted RBP10.12□□□□□ -0.79
CDKN3-210ENST00000556305 CFAP44Q96MT7 982 aa10.12□□□□□ -0.79
CDKN3-210ENST00000556305 RASEFQ8IZ41 740 aa10.11□□□□□ -0.79
CDKN3-210ENST00000556305 SPRYD3Q8NCJ5 442 aa10.11□□□□□ -0.79
CDKN3-210ENST00000556305 CHRM1P11229 460 aaPredicted RBP10.1□□□□□ -0.79
CDKN3-210ENST00000556305 HS6ST3Q8IZP7 471 aa10.1□□□□□ -0.79
CDKN3-210ENST00000556305 COLQQ9Y215 455 aaPredicted RBP10.09□□□□□ -0.79
CDKN3-210ENST00000556305 VGFO15240 615 aaPredicted RBP10.07□□□□□ -0.8
CDKN3-210ENST00000556305 VSIG10Q8N0Z9 540 aa10.07□□□□□ -0.8
CDKN3-210ENST00000556305 RNF25Q96BH1 459 aaPredicted RBP10.06□□□□□ -0.8
CDKN3-210ENST00000556305 TTLL13PA6NNM8 815 aa10.05□□□□□ -0.8
CDKN3-210ENST00000556305 MAP3K13O43283 966 aa10.05□□□□□ -0.8
CDKN3-210ENST00000556305 IER5LQ5T953 404 aa10.02□□□□□ -0.81
CDKN3-210ENST00000556305 STK25O00506 426 aa10.01□□□□□ -0.81
CDKN3-210ENST00000556305 ST18O60284 1047 aa10.01□□□□□ -0.81
CDKN3-210ENST00000556305 SEC24BO95487 1268 aa10.01□□□□□ -0.81
CDKN3-210ENST00000556305 PYGBP11216 843 aa10.01□□□□□ -0.81
CDKN3-210ENST00000556305 DNAJC5Q9H3Z4 198 aa10.01□□□□□ -0.81
CDKN3-210ENST00000556305 ZNF467Q7Z7K2 595 aaPredicted RBP9.99□□□□□ -0.81
CDKN3-210ENST00000556305 SGIP1Q9BQI5 828 aa9.99□□□□□ -0.81
CDKN3-210ENST00000556305 RYDENQ9NUL5 291 aaKnown RBP9.98□□□□□ -0.81
CDKN3-210ENST00000556305 MMRN1Q13201 1228 aa9.97□□□□□ -0.81
CDKN3-210ENST00000556305 TRIM35Q9UPQ4 493 aa9.97□□□□□ -0.81
CDKN3-210ENST00000556305 SLAIN1Q8ND83 568 aa9.95□□□□□ -0.82
CDKN3-210ENST00000556305 STK24Q9Y6E0 443 aa9.95□□□□□ -0.82
CDKN3-210ENST00000556305 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.93□□□□□ -0.82
CDKN3-210ENST00000556305 SPNS2Q8IVW8 549 aa9.93□□□□□ -0.82
CDKN3-210ENST00000556305 ZFP91Q96JP5 570 aaPredicted RBP9.93□□□□□ -0.82
CDKN3-210ENST00000556305 BCL11BQ9C0K0 894 aaPredicted RBP9.93□□□□□ -0.82
CDKN3-210ENST00000556305 BCANQ96GW7 911 aa9.92□□□□□ -0.82
CDKN3-210ENST00000556305 TMEM121BQ9BXQ6 578 aaPredicted RBP9.9□□□□□ -0.82
CDKN3-210ENST00000556305 PDAP1Q13442 181 aaKnown RBP9.89□□□□□ -0.83
CDKN3-210ENST00000556305 TSHZ2Q9NRE2 1034 aa9.88□□□□□ -0.83
CDKN3-210ENST00000556305 PCDHB13Q9Y5F0 798 aa9.86□□□□□ -0.83
CDKN3-210ENST00000556305 NKX1-1Q15270 411 aaPredicted RBP9.85□□□□□ -0.83
CDKN3-210ENST00000556305 IRX5P78411 483 aaPredicted RBP9.84□□□□□ -0.83
CDKN3-210ENST00000556305 GTPBP6O43824 516 aaPredicted RBP9.83□□□□□ -0.84
CDKN3-210ENST00000556305 KDM2AQ9Y2K7 1162 aa9.83□□□□□ -0.84
CDKN3-210ENST00000556305 PLCG2P16885 1265 aa9.82□□□□□ -0.84
CDKN3-210ENST00000556305 IFNL1Q8IU54 200 aa9.82□□□□□ -0.84
CDKN3-210ENST00000556305 PSEN1P49768 467 aa9.81□□□□□ -0.84
CDKN3-210ENST00000556305 PCDHB8Q9UN66 801 aa9.81□□□□□ -0.84
CDKN3-210ENST00000556305 TMEM106CQ9BVX2 250 aa9.79□□□□□ -0.84
CDKN3-210ENST00000556305 SNPHO15079 494 aa9.77□□□□□ -0.85
CDKN3-210ENST00000556305 MARVELD3Q96A59 401 aa9.75□□□□□ -0.85
CDKN3-210ENST00000556305 OCEL1Q9H607 264 aa9.72□□□□□ -0.85
CDKN3-210ENST00000556305 NBR1Q14596 966 aa9.71□□□□□ -0.86
CDKN3-210ENST00000556305 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.71□□□□□ -0.86
CDKN3-210ENST00000556305 KRTAP3-3Q9BYR6 98 aa9.7□□□□□ -0.86
CDKN3-210ENST00000556305 KRTAP3-2Q9BYR7 98 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms