RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 DCAF8Q5TAQ9 597 aa8.87□□□□□ -0.99
SPTLC2-204ENST00000556264 SPDYE1Q8NFV5 336 aaPredicted RBP8.83□□□□□ -1
SPTLC2-204ENST00000556264 DNAJC5Q9H3Z4 198 aa8.83□□□□□ -1
SPTLC2-204ENST00000556264 RIOK3O14730 519 aaKnown RBP8.82□□□□□ -1
SPTLC2-204ENST00000556264 CLEC11AQ9Y240 323 aa8.8□□□□□ -1
SPTLC2-204ENST00000556264 PRR29P0C7W0 189 aa8.79□□□□□ -1
SPTLC2-204ENST00000556264 NKX1-1Q15270 411 aaPredicted RBP8.79□□□□□ -1
SPTLC2-204ENST00000556264 CREBZFQ9NS37 354 aa8.79□□□□□ -1
SPTLC2-204ENST00000556264 NBR1Q14596 966 aa8.78□□□□□ -1
SPTLC2-204ENST00000556264 AKT1S1Q96B36 256 aa8.78□□□□□ -1
SPTLC2-204ENST00000556264 FAM212AQ96EL1 285 aa8.78□□□□□ -1
SPTLC2-204ENST00000556264 GTPBP6O43824 516 aaPredicted RBP8.77□□□□□ -1.01
SPTLC2-204ENST00000556264 STK25O00506 426 aa8.76□□□□□ -1.01
SPTLC2-204ENST00000556264 RBM42Q9BTD8 480 aaKnown RBP8.76□□□□□ -1.01
SPTLC2-204ENST00000556264 VGFO15240 615 aaPredicted RBP8.75□□□□□ -1.01
SPTLC2-204ENST00000556264 MNX1P50219 401 aaPredicted RBP8.75□□□□□ -1.01
SPTLC2-204ENST00000556264 CHRM1P11229 460 aaPredicted RBP8.73□□□□□ -1.01
SPTLC2-204ENST00000556264 REM2Q8IYK8 340 aaPredicted RBP8.72□□□□□ -1.01
SPTLC2-204ENST00000556264 RASEFQ8IZ41 740 aa8.72□□□□□ -1.01
SPTLC2-204ENST00000556264 STK24Q9Y6E0 443 aa8.69□□□□□ -1.02
SPTLC2-204ENST00000556264 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.68□□□□□ -1.02
SPTLC2-204ENST00000556264 PYGBP11216 843 aa8.68□□□□□ -1.02
SPTLC2-204ENST00000556264 ZFP91Q96JP5 570 aaPredicted RBP8.68□□□□□ -1.02
SPTLC2-204ENST00000556264 BCL11BQ9C0K0 894 aaPredicted RBP8.68□□□□□ -1.02
SPTLC2-204ENST00000556264 SGIP1Q9BQI5 828 aa8.67□□□□□ -1.02
SPTLC2-204ENST00000556264 RYDENQ9NUL5 291 aaKnown RBP8.63□□□□□ -1.03
SPTLC2-204ENST00000556264 PITPNM1O00562 1244 aa8.6□□□□□ -1.03
SPTLC2-204ENST00000556264 TSPYL2Q9H2G4 693 aaPredicted RBP8.56□□□□□ -1.04
SPTLC2-204ENST00000556264 CHADLQ6NUI6 762 aa8.53□□□□□ -1.04
SPTLC2-204ENST00000556264 ZNF467Q7Z7K2 595 aaPredicted RBP8.53□□□□□ -1.04
SPTLC2-204ENST00000556264 CADPS2Q86UW7 1296 aa8.5□□□□□ -1.05
SPTLC2-204ENST00000556264 P3H3Q8IVL6 736 aa8.5□□□□□ -1.05
SPTLC2-204ENST00000556264 WDR70Q9NW82 654 aa8.5□□□□□ -1.05
SPTLC2-204ENST00000556264 PCDHB8Q9UN66 801 aa8.5□□□□□ -1.05
SPTLC2-204ENST00000556264 PCDHB13Q9Y5F0 798 aa8.5□□□□□ -1.05
SPTLC2-204ENST00000556264 PDAP1Q13442 181 aaKnown RBP8.49□□□□□ -1.05
SPTLC2-204ENST00000556264 FARP1Q9Y4F1 1045 aaPredicted RBP8.49□□□□□ -1.05
SPTLC2-204ENST00000556264 PSEN1P49768 467 aa8.45□□□□□ -1.06
SPTLC2-204ENST00000556264 KCNV2Q8TDN2 545 aa8.44□□□□□ -1.06
SPTLC2-204ENST00000556264 ZNF579Q8NAF0 562 aaKnown RBP8.43□□□□□ -1.06
SPTLC2-204ENST00000556264 MFRPQ9BY79 579 aa8.43□□□□□ -1.06
SPTLC2-204ENST00000556264 CCDC61Q9Y6R9 512 aa8.43□□□□□ -1.06
SPTLC2-204ENST00000556264 PRKAR2AP13861 404 aaKnown RBP8.4□□□□□ -1.06
SPTLC2-204ENST00000556264 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.39□□□□□ -1.07
SPTLC2-204ENST00000556264 GTF3C3Q9Y5Q9 886 aa8.39□□□□□ -1.07
SPTLC2-204ENST00000556264 PPP1R37O75864 691 aa8.38□□□□□ -1.07
SPTLC2-204ENST00000556264 LMOD2Q6P5Q4 547 aa8.38□□□□□ -1.07
SPTLC2-204ENST00000556264 TULP1O00294 542 aaPredicted RBP8.37□□□□□ -1.07
SPTLC2-204ENST00000556264 IFNL1Q8IU54 200 aa8.37□□□□□ -1.07
SPTLC2-204ENST00000556264 EFCAB3Q8N7B9 438 aa8.36□□□□□ -1.07
SPTLC2-204ENST00000556264 TIMELESSQ9UNS1 1208 aa8.36□□□□□ -1.07
SPTLC2-204ENST00000556264 PAK3O75914 559 aaPredicted RBP8.35□□□□□ -1.07
SPTLC2-204ENST00000556264 NLRP6P59044 892 aa8.35□□□□□ -1.07
SPTLC2-204ENST00000556264 CABP2Q9NPB3 220 aa8.35□□□□□ -1.07
SPTLC2-204ENST00000556264 MAP3K13O43283 966 aa8.34□□□□□ -1.07
SPTLC2-204ENST00000556264 TMEM132AQ24JP5 1023 aa8.34□□□□□ -1.07
SPTLC2-204ENST00000556264 FBXO22Q8NEZ5 403 aa8.34□□□□□ -1.07
SPTLC2-204ENST00000556264 ARHGEF1Q92888 912 aaKnown RBP8.34□□□□□ -1.07
SPTLC2-204ENST00000556264 SOX12O15370 315 aa8.33□□□□□ -1.08
SPTLC2-204ENST00000556264 FXR2P51116 673 aaKnown RBP eCLIP8.33□□□□□ -1.08
SPTLC2-204ENST00000556264 KIF12Q96FN5 646 aa8.33□□□□□ -1.08
SPTLC2-204ENST00000556264 PHF8Q9UPP1 1060 aa8.33□□□□□ -1.08
SPTLC2-204ENST00000556264 E2F4Q16254 413 aa8.32□□□□□ -1.08
SPTLC2-204ENST00000556264 SEMA3EO15041 775 aa8.27□□□□□ -1.09
SPTLC2-204ENST00000556264 TESPA1A2RU30 521 aaPredicted RBP8.26□□□□□ -1.09
SPTLC2-204ENST00000556264 ZC3H15Q8WU90 426 aaKnown RBP8.26□□□□□ -1.09
SPTLC2-204ENST00000556264 LARP6Q9BRS8 491 aaKnown RBP8.26□□□□□ -1.09
SPTLC2-204ENST00000556264 NCKAP5LQ9HCH0 1330 aa8.25□□□□□ -1.09
SPTLC2-204ENST00000556264 PDE4AP27815 886 aa8.24□□□□□ -1.09
SPTLC2-204ENST00000556264 ERICH6Q7L0X2 663 aa8.24□□□□□ -1.09
SPTLC2-204ENST00000556264 ZRANB1Q9UGI0 708 aa8.24□□□□□ -1.09
SPTLC2-204ENST00000556264 BRPF1P55201 1214 aaPredicted RBP8.23□□□□□ -1.09
SPTLC2-204ENST00000556264 PIP4P2Q8N4L2 257 aa8.23□□□□□ -1.09
SPTLC2-204ENST00000556264 MS4A4AQ96JQ5 239 aa8.23□□□□□ -1.09
SPTLC2-204ENST00000556264 CHRDL2Q6WN34 429 aa8.21□□□□□ -1.1
SPTLC2-204ENST00000556264 PHF12Q96QT6 1004 aa8.21□□□□□ -1.1
SPTLC2-204ENST00000556264 GOLGA2Q08379 1002 aa8.2□□□□□ -1.1
SPTLC2-204ENST00000556264 SLC24A3Q9HC58 644 aa8.2□□□□□ -1.1
SPTLC2-204ENST00000556264 CD44P16070 742 aaKnown RBP8.19□□□□□ -1.1
SPTLC2-204ENST00000556264 MFSD10Q14728 455 aa8.19□□□□□ -1.1
SPTLC2-204ENST00000556264 TMEM106CQ9BVX2 250 aa8.19□□□□□ -1.1
SPTLC2-204ENST00000556264 CRISPLD2Q9H0B8 497 aa8.19□□□□□ -1.1
SPTLC2-204ENST00000556264 NEUROD2Q15784 382 aa8.18□□□□□ -1.1
SPTLC2-204ENST00000556264 SMYD5Q6GMV2 418 aa8.18□□□□□ -1.1
SPTLC2-204ENST00000556264 DDX27Q96GQ7 796 aaKnown RBP8.18□□□□□ -1.1
SPTLC2-204ENST00000556264 C14orf37Q86TY3 774 aa8.16□□□□□ -1.1
SPTLC2-204ENST00000556264 ARIH1Q9Y4X5 557 aaPredicted RBP8.16□□□□□ -1.1
SPTLC2-204ENST00000556264 ZMYND10O75800 440 aa8.15□□□□□ -1.1
SPTLC2-204ENST00000556264 MKRN3Q13064 507 aaKnown RBP8.15□□□□□ -1.1
SPTLC2-204ENST00000556264 CAMK2BQ13554 666 aa8.13□□□□□ -1.11
SPTLC2-204ENST00000556264 TRPC6Q9Y210 931 aa8.13□□□□□ -1.11
SPTLC2-204ENST00000556264 MS4A3Q96HJ5 214 aa8.11□□□□□ -1.11
SPTLC2-204ENST00000556264 BARGINQ6ZT62 677 aa8.1□□□□□ -1.11
SPTLC2-204ENST00000556264 MLLT3P42568 568 aaPredicted RBP8.08□□□□□ -1.12
SPTLC2-204ENST00000556264 PPP1R15BQ5SWA1 713 aa8.08□□□□□ -1.12
SPTLC2-204ENST00000556264 RBM26Q5T8P6 1007 aaKnown RBP8.08□□□□□ -1.12
SPTLC2-204ENST00000556264 GPHNQ9NQX3 736 aaPredicted RBP8.07□□□□□ -1.12
SPTLC2-204ENST00000556264 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.07□□□□□ -1.12
SPTLC2-204ENST00000556264 TTLL13PA6NNM8 815 aa8.05□□□□□ -1.12
SPTLC2-204ENST00000556264 TIE1P35590 1138 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms