RNA–Protein interactions for RNA: ENST00000556130.1

LINC01588-210, Transcript of long intergenic non-protein coding RNA 1588, human

TSL 2

Gene LINC01588, Length 685 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01588-210	ENST00000556130	PRKCSH	P14314	528 aa	Predicted RBP	14.01	□□□□□ -0.17
LINC01588-210	ENST00000556130	DCAF8	Q5TAQ9	597 aa		14.01	□□□□□ -0.17
LINC01588-210	ENST00000556130	RNF25	Q96BH1	459 aa	Predicted RBP	14.01	□□□□□ -0.17
LINC01588-210	ENST00000556130	DNAJC5	Q9H3Z4	198 aa		14.01	□□□□□ -0.17
LINC01588-210	ENST00000556130	RIOK3	O14730	519 aa	Known RBP	13.98	□□□□□ -0.17
LINC01588-210	ENST00000556130	PRR29	P0C7W0	189 aa		13.97	□□□□□ -0.17
LINC01588-210	ENST00000556130	FAM212A	Q96EL1	285 aa		13.97	□□□□□ -0.17
LINC01588-210	ENST00000556130	CLEC11A	Q9Y240	323 aa		13.97	□□□□□ -0.17
LINC01588-210	ENST00000556130	CREBZF	Q9NS37	354 aa		13.94	□□□□□ -0.18
LINC01588-210	ENST00000556130	TPRN	Q4KMQ1	711 aa		13.9	□□□□□ -0.18
LINC01588-210	ENST00000556130	MNX1	P50219	401 aa	Predicted RBP	13.89	□□□□□ -0.19
LINC01588-210	ENST00000556130	VGF	O15240	615 aa	Predicted RBP	13.88	□□□□□ -0.19
LINC01588-210	ENST00000556130	CHRM1	P11229	460 aa	Predicted RBP	13.88	□□□□□ -0.19
LINC01588-210	ENST00000556130	REM2	Q8IYK8	340 aa	Predicted RBP	13.88	□□□□□ -0.19
LINC01588-210	ENST00000556130	STK25	O00506	426 aa		13.85	□□□□□ -0.19
LINC01588-210	ENST00000556130	NKX1-1	Q15270	411 aa	Predicted RBP	13.85	□□□□□ -0.19
LINC01588-210	ENST00000556130	NBR1	Q14596	966 aa		13.82	□□□□□ -0.2
LINC01588-210	ENST00000556130	GTPBP6	O43824	516 aa	Predicted RBP	13.81	□□□□□ -0.2
LINC01588-210	ENST00000556130	RASEF	Q8IZ41	740 aa		13.81	□□□□□ -0.2
LINC01588-210	ENST00000556130	SGIP1	Q9BQI5	828 aa		13.8	□□□□□ -0.2
LINC01588-210	ENST00000556130	RYDEN	Q9NUL5	291 aa	Known RBP	13.76	□□□□□ -0.21
LINC01588-210	ENST00000556130	STK24	Q9Y6E0	443 aa		13.73	□□□□□ -0.21
LINC01588-210	ENST00000556130	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC01588-210	ENST00000556130	ZFP91	Q96JP5	570 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC01588-210	ENST00000556130	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC01588-210	ENST00000556130	PYGB	P11216	843 aa		13.71	□□□□□ -0.21
LINC01588-210	ENST00000556130	PITPNM1	O00562	1244 aa		13.7	□□□□□ -0.22
LINC01588-210	ENST00000556130	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC01588-210	ENST00000556130	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.55	□□□□□ -0.24
LINC01588-210	ENST00000556130	CHADL	Q6NUI6	762 aa		13.52	□□□□□ -0.25
LINC01588-210	ENST00000556130	PDAP1	Q13442	181 aa	Known RBP	13.51	□□□□□ -0.25
LINC01588-210	ENST00000556130	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.51	□□□□□ -0.25
LINC01588-210	ENST00000556130	P3H3	Q8IVL6	736 aa		13.49	□□□□□ -0.25
LINC01588-210	ENST00000556130	WDR70	Q9NW82	654 aa		13.43	□□□□□ -0.26
LINC01588-210	ENST00000556130	ZNF579	Q8NAF0	562 aa	Known RBP	13.42	□□□□□ -0.26
LINC01588-210	ENST00000556130	PCDHB8	Q9UN66	801 aa		13.42	□□□□□ -0.26
LINC01588-210	ENST00000556130	PCDHB13	Q9Y5F0	798 aa		13.42	□□□□□ -0.26
LINC01588-210	ENST00000556130	PSEN1	P49768	467 aa		13.4	□□□□□ -0.26
LINC01588-210	ENST00000556130	CCDC61	Q9Y6R9	512 aa		13.4	□□□□□ -0.26
LINC01588-210	ENST00000556130	PRKAR2A	P13861	404 aa	Known RBP	13.38	□□□□□ -0.27
LINC01588-210	ENST00000556130	PAK3	O75914	559 aa	Predicted RBP	13.35	□□□□□ -0.27
LINC01588-210	ENST00000556130	CADPS2	Q86UW7	1296 aa		13.35	□□□□□ -0.27
LINC01588-210	ENST00000556130	MFRP	Q9BY79	579 aa		13.34	□□□□□ -0.27
LINC01588-210	ENST00000556130	KCNV2	Q8TDN2	545 aa		13.31	□□□□□ -0.28
LINC01588-210	ENST00000556130	FXR2	P51116	673 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
LINC01588-210	ENST00000556130	IFNL1	Q8IU54	200 aa		13.27	□□□□□ -0.29
LINC01588-210	ENST00000556130	NLRP6	P59044	892 aa		13.26	□□□□□ -0.29
LINC01588-210	ENST00000556130	SOX12	O15370	315 aa		13.25	□□□□□ -0.29
LINC01588-210	ENST00000556130	MAP3K13	O43283	966 aa		13.22	□□□□□ -0.29
LINC01588-210	ENST00000556130	EFCAB3	Q8N7B9	438 aa		13.22	□□□□□ -0.29
LINC01588-210	ENST00000556130	KIF12	Q96FN5	646 aa		13.22	□□□□□ -0.29
LINC01588-210	ENST00000556130	CABP2	Q9NPB3	220 aa		13.22	□□□□□ -0.29
LINC01588-210	ENST00000556130	TULP1	O00294	542 aa	Predicted RBP	13.21	□□□□□ -0.29
LINC01588-210	ENST00000556130	FBXO22	Q8NEZ5	403 aa		13.21	□□□□□ -0.29
LINC01588-210	ENST00000556130	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
LINC01588-210	ENST00000556130	PPP1R37	O75864	691 aa		13.19	□□□□□ -0.3
LINC01588-210	ENST00000556130	LMOD2	Q6P5Q4	547 aa		13.19	□□□□□ -0.3
LINC01588-210	ENST00000556130	ARHGEF1	Q92888	912 aa	Known RBP	13.18	□□□□□ -0.3
LINC01588-210	ENST00000556130	PHF8	Q9UPP1	1060 aa		13.17	□□□□□ -0.3
LINC01588-210	ENST00000556130	E2F4	Q16254	413 aa		13.15	□□□□□ -0.3
LINC01588-210	ENST00000556130	CHRDL2	Q6WN34	429 aa		13.13	□□□□□ -0.31
LINC01588-210	ENST00000556130	PIP4P2	Q8N4L2	257 aa		13.12	□□□□□ -0.31
LINC01588-210	ENST00000556130	TMEM132A	Q24JP5	1023 aa		13.1	□□□□□ -0.31
LINC01588-210	ENST00000556130	ZRANB1	Q9UGI0	708 aa		13.1	□□□□□ -0.31
LINC01588-210	ENST00000556130	GTF3C3	Q9Y5Q9	886 aa		13.07	□□□□□ -0.32
LINC01588-210	ENST00000556130	CD44	P16070	742 aa	Known RBP	13.05	□□□□□ -0.32
LINC01588-210	ENST00000556130	PDE4A	P27815	886 aa		13.05	□□□□□ -0.32
LINC01588-210	ENST00000556130	GOLGA2	Q08379	1002 aa		13.05	□□□□□ -0.32
LINC01588-210	ENST00000556130	LARP6	Q9BRS8	491 aa	Known RBP	13.03	□□□□□ -0.32
LINC01588-210	ENST00000556130	NCKAP5L	Q9HCH0	1330 aa		13.03	□□□□□ -0.32
LINC01588-210	ENST00000556130	TESPA1	A2RU30	521 aa	Predicted RBP	13.02	□□□□□ -0.33
LINC01588-210	ENST00000556130	ERICH6	Q7L0X2	663 aa		13.01	□□□□□ -0.33
LINC01588-210	ENST00000556130	MS4A4A	Q96JQ5	239 aa		13.01	□□□□□ -0.33
LINC01588-210	ENST00000556130	PHF12	Q96QT6	1004 aa		13.01	□□□□□ -0.33
LINC01588-210	ENST00000556130	SEMA3E	O15041	775 aa		13	□□□□□ -0.33
LINC01588-210	ENST00000556130	MFSD10	Q14728	455 aa		12.99	□□□□□ -0.33
LINC01588-210	ENST00000556130	TMEM106C	Q9BVX2	250 aa		12.99	□□□□□ -0.33
LINC01588-210	ENST00000556130	ZC3H15	Q8WU90	426 aa	Known RBP	12.98	□□□□□ -0.33
LINC01588-210	ENST00000556130	SMYD5	Q6GMV2	418 aa		12.97	□□□□□ -0.33
LINC01588-210	ENST00000556130	DDX27	Q96GQ7	796 aa	Known RBP	12.97	□□□□□ -0.33
LINC01588-210	ENST00000556130	CRISPLD2	Q9H0B8	497 aa		12.97	□□□□□ -0.33
LINC01588-210	ENST00000556130	TIMELESS	Q9UNS1	1208 aa		12.96	□□□□□ -0.33
LINC01588-210	ENST00000556130	MKRN3	Q13064	507 aa	Known RBP	12.95	□□□□□ -0.34
LINC01588-210	ENST00000556130	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.95	□□□□□ -0.34
LINC01588-210	ENST00000556130	BRPF1	P55201	1214 aa	Predicted RBP	12.9	□□□□□ -0.34
LINC01588-210	ENST00000556130	CAMK2B	Q13554	666 aa		12.89	□□□□□ -0.35
LINC01588-210	ENST00000556130	MS4A3	Q96HJ5	214 aa		12.89	□□□□□ -0.35
LINC01588-210	ENST00000556130	TRPC6	Q9Y210	931 aa		12.86	□□□□□ -0.35
LINC01588-210	ENST00000556130	TIE1	P35590	1138 aa		12.85	□□□□□ -0.35
LINC01588-210	ENST00000556130	SLC24A3	Q9HC58	644 aa		12.84	□□□□□ -0.35
LINC01588-210	ENST00000556130	ZMYND10	O75800	440 aa		12.83	□□□□□ -0.36
LINC01588-210	ENST00000556130	NEUROD2	Q15784	382 aa		12.83	□□□□□ -0.36
LINC01588-210	ENST00000556130	C19orf67	A6NJJ6	358 aa		12.81	□□□□□ -0.36
LINC01588-210	ENST00000556130	ILDR1	Q86SU0	546 aa	Predicted RBP	12.81	□□□□□ -0.36
LINC01588-210	ENST00000556130	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
LINC01588-210	ENST00000556130	PPP1R15B	Q5SWA1	713 aa		12.8	□□□□□ -0.36
LINC01588-210	ENST00000556130	GPHN	Q9NQX3	736 aa	Predicted RBP	12.8	□□□□□ -0.36
LINC01588-210	ENST00000556130	TTLL13P	A6NNM8	815 aa		12.79	□□□□□ -0.36
LINC01588-210	ENST00000556130	BARGIN	Q6ZT62	677 aa		12.75	□□□□□ -0.37
LINC01588-210	ENST00000556130	C14orf37	Q86TY3	774 aa		12.73	□□□□□ -0.37

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