RNA–Protein interactions for RNA: ENST00000556074.5

NEMF-209, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 3,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-209ENST00000556074 RAD21O60216 631 aa11.06□□□□□ -0.64
NEMF-209ENST00000556074 FOXD1Q16676 465 aa11.05□□□□□ -0.64
NEMF-209ENST00000556074 BCL11AQ9H165 835 aa11.05□□□□□ -0.64
NEMF-209ENST00000556074 PDE4CQ08493 712 aa11.03□□□□□ -0.64
NEMF-209ENST00000556074 MTMR7Q9Y216 660 aa11.01□□□□□ -0.65
NEMF-209ENST00000556074 FAM9AQ8IZU1 332 aaPredicted RBP11.01□□□□□ -0.65
NEMF-209ENST00000556074 LMOD2Q6P5Q4 547 aa10.99□□□□□ -0.65
NEMF-209ENST00000556074 MYCNP04198 464 aaPredicted RBP10.98□□□□□ -0.65
NEMF-209ENST00000556074 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
NEMF-209ENST00000556074 APBB1O00213 710 aa10.96□□□□□ -0.66
NEMF-209ENST00000556074 TAF7LQ5H9L4 462 aa10.96□□□□□ -0.66
NEMF-209ENST00000556074 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.96□□□□□ -0.66
NEMF-209ENST00000556074 FOXD4L5Q5VV16 416 aaPredicted RBP10.95□□□□□ -0.66
NEMF-209ENST00000556074 FOXD4L4Q8WXT5 416 aaPredicted RBP10.95□□□□□ -0.66
NEMF-209ENST00000556074 RBM25P49756 843 aaKnown RBP10.95□□□□□ -0.66
NEMF-209ENST00000556074 MAPK8IP2Q13387 824 aaPredicted RBP10.95□□□□□ -0.66
NEMF-209ENST00000556074 POLR3GLQ9BT43 218 aa10.95□□□□□ -0.66
NEMF-209ENST00000556074 ATF5Q9Y2D1 282 aaPredicted RBP10.89□□□□□ -0.67
NEMF-209ENST00000556074 SLC24A3Q9HC58 644 aa10.88□□□□□ -0.67
NEMF-209ENST00000556074 PROM2Q8N271 834 aa10.86□□□□□ -0.67
NEMF-209ENST00000556074 ZNF692Q9BU19 519 aaPredicted RBP10.83□□□□□ -0.68
NEMF-209ENST00000556074 SPDYE4A6NLX3 237 aa10.81□□□□□ -0.68
NEMF-209ENST00000556074 AEBP1Q8IUX7 1158 aa10.81□□□□□ -0.68
NEMF-209ENST00000556074 PIAS4Q8N2W9 510 aaPredicted RBP10.81□□□□□ -0.68
NEMF-209ENST00000556074 MFAP1P55081 439 aaKnown RBP10.8□□□□□ -0.68
NEMF-209ENST00000556074 CCDC82Q8N4S0 544 aa10.8□□□□□ -0.68
NEMF-209ENST00000556074 ZC3H15Q8WU90 426 aaKnown RBP10.8□□□□□ -0.68
NEMF-209ENST00000556074 USP35Q9P2H5 1018 aa10.8□□□□□ -0.68
NEMF-209ENST00000556074 FAM177A1Q8N128 213 aaPredicted RBP10.79□□□□□ -0.68
NEMF-209ENST00000556074 TMCO4Q5TGY1 634 aa10.78□□□□□ -0.68
NEMF-209ENST00000556074 TRAIPQ9BWF2 469 aa10.76□□□□□ -0.69
NEMF-209ENST00000556074 NEFLP07196 543 aa10.76□□□□□ -0.69
NEMF-209ENST00000556074 SPOCK2Q92563 424 aa10.76□□□□□ -0.69
NEMF-209ENST00000556074 MKRN3Q13064 507 aaKnown RBP10.74□□□□□ -0.69
NEMF-209ENST00000556074 BCL11BQ9C0K0 894 aaPredicted RBP10.72□□□□□ -0.69
NEMF-209ENST00000556074 E9PSI1 815 aa10.71□□□□□ -0.69
NEMF-209ENST00000556074 GZF1Q9H116 711 aaPredicted RBP10.71□□□□□ -0.7
NEMF-209ENST00000556074 NKX1-1Q15270 411 aaPredicted RBP10.7□□□□□ -0.7
NEMF-209ENST00000556074 BCCIPQ9P287 314 aaKnown RBP eCLIP10.69□□□□□ -0.7
NEMF-209ENST00000556074 IL27Q8NEV9 243 aa10.69□□□□□ -0.7
NEMF-209ENST00000556074 CWC22Q9HCG8 908 aaKnown RBP10.68□□□□□ -0.7
NEMF-209ENST00000556074 GPBP1L1Q9HC44 474 aaPredicted RBP10.67□□□□□ -0.7
NEMF-209ENST00000556074 BRPF3Q9ULD4 1205 aa10.67□□□□□ -0.7
NEMF-209ENST00000556074 HS6ST3Q8IZP7 471 aa10.67□□□□□ -0.7
NEMF-209ENST00000556074 RNF216Q9NWF9 866 aaPredicted RBP10.66□□□□□ -0.7
NEMF-209ENST00000556074 GTPBP6O43824 516 aaPredicted RBP10.65□□□□□ -0.7
NEMF-209ENST00000556074 ZFP91Q96JP5 570 aaPredicted RBP10.65□□□□□ -0.7
NEMF-209ENST00000556074 NISCHQ9Y2I1 1504 aa10.65□□□□□ -0.71
NEMF-209ENST00000556074 KCNV2Q8TDN2 545 aa10.64□□□□□ -0.71
NEMF-209ENST00000556074 ZNF592Q92610 1267 aa10.64□□□□□ -0.71
NEMF-209ENST00000556074 P3H3Q8IVL6 736 aa10.63□□□□□ -0.71
NEMF-209ENST00000556074 IRX6P78412 446 aaPredicted RBP10.63□□□□□ -0.71
NEMF-209ENST00000556074 RSPH4AQ5TD94 716 aa10.62□□□□□ -0.71
NEMF-209ENST00000556074 CERS3Q8IU89 383 aa10.62□□□□□ -0.71
NEMF-209ENST00000556074 PPM1GO15355 546 aaPredicted RBP10.61□□□□□ -0.71
NEMF-209ENST00000556074 SCAF1Q9H7N4 1312 aaKnown RBP10.61□□□□□ -0.71
NEMF-209ENST00000556074 TICAM2Q86XR7 235 aa10.58□□□□□ -0.72
NEMF-209ENST00000556074 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.58□□□□□ -0.72
NEMF-209ENST00000556074 WDR70Q9NW82 654 aa10.58□□□□□ -0.72
NEMF-209ENST00000556074 TMED8Q6PL24 325 aaPredicted RBP10.57□□□□□ -0.72
NEMF-209ENST00000556074 IRF5Q13568 498 aa10.54□□□□□ -0.72
NEMF-209ENST00000556074 PKNOX2Q96KN3 472 aa10.54□□□□□ -0.72
NEMF-209ENST00000556074 FGD1P98174 961 aa10.53□□□□□ -0.72
NEMF-209ENST00000556074 PSMD1Q99460 953 aa10.52□□□□□ -0.72
NEMF-209ENST00000556074 ZMYND10O75800 440 aa10.52□□□□□ -0.73
NEMF-209ENST00000556074 CLUAP1Q96AJ1 413 aa10.52□□□□□ -0.73
NEMF-209ENST00000556074 ZNF316A6NFI3 1004 aaPredicted RBP10.51□□□□□ -0.73
NEMF-209ENST00000556074 TRAK2O60296 914 aa10.51□□□□□ -0.73
NEMF-209ENST00000556074 CCDC125Q86Z20 511 aa10.51□□□□□ -0.73
NEMF-209ENST00000556074 RETREG2Q8NC44 543 aa10.51□□□□□ -0.73
NEMF-209ENST00000556074 ARID4BQ4LE39 1312 aaPredicted RBP10.5□□□□□ -0.73
NEMF-209ENST00000556074 FBXW7Q969H0 707 aa10.49□□□□□ -0.73
NEMF-209ENST00000556074 CLSTN1O94985 981 aa10.48□□□□□ -0.73
NEMF-209ENST00000556074 CC2D2BQ6DHV5 1058 aa10.48□□□□□ -0.73
NEMF-209ENST00000556074 BARGINQ6ZT62 677 aa10.47□□□□□ -0.73
NEMF-209ENST00000556074 CCDC136Q96JN2 1154 aa10.47□□□□□ -0.73
NEMF-209ENST00000556074 KDM4CQ9H3R0 1056 aa10.47□□□□□ -0.73
NEMF-209ENST00000556074 PRDM16Q9HAZ2 1276 aa10.44□□□□□ -0.74
NEMF-209ENST00000556074 MKRN4PQ13434 485 aaPredicted RBP10.43□□□□□ -0.74
NEMF-209ENST00000556074 RNF25Q96BH1 459 aaPredicted RBP10.43□□□□□ -0.74
NEMF-209ENST00000556074 KDM4AO75164 1064 aa10.42□□□□□ -0.74
NEMF-209ENST00000556074 CCDC27Q2M243 656 aa10.42□□□□□ -0.74
NEMF-209ENST00000556074 A0A0U1RQG5 324 aaPredicted RBP10.41□□□□□ -0.74
NEMF-209ENST00000556074 ONECUT3O60422 494 aaPredicted RBP10.41□□□□□ -0.74
NEMF-209ENST00000556074 A6NJR5 290 aa10.41□□□□□ -0.74
NEMF-209ENST00000556074 FLIIQ13045 1269 aa10.41□□□□□ -0.74
NEMF-209ENST00000556074 ZNF526Q8TF50 670 aaPredicted RBP10.41□□□□□ -0.74
NEMF-209ENST00000556074 CIZ1Q9ULV3 898 aaPredicted RBP10.4□□□□□ -0.74
NEMF-209ENST00000556074 CADPSQ9ULU8 1353 aa10.4□□□□□ -0.75
NEMF-209ENST00000556074 ZNF777Q9ULD5 760 aaPredicted RBP10.39□□□□□ -0.75
NEMF-209ENST00000556074 TRIM41Q8WV44 630 aa10.38□□□□□ -0.75
NEMF-209ENST00000556074 UNCXA6NJT0 531 aa10.36□□□□□ -0.75
NEMF-209ENST00000556074 SEMA3EO15041 775 aa10.36□□□□□ -0.75
NEMF-209ENST00000556074 ZNF326Q5BKZ1 582 aaKnown RBP10.35□□□□□ -0.75
NEMF-209ENST00000556074 IGSF5Q9NSI5 407 aa10.35□□□□□ -0.75
NEMF-209ENST00000556074 AMOTL2Q9Y2J4 779 aa10.34□□□□□ -0.75
NEMF-209ENST00000556074 SMARCA5O60264 1052 aaPredicted RBP10.33□□□□□ -0.75
NEMF-209ENST00000556074 TESPA1A2RU30 521 aaPredicted RBP10.32□□□□□ -0.76
NEMF-209ENST00000556074 POLA2Q14181 598 aa10.32□□□□□ -0.76
NEMF-209ENST00000556074 CADPS2Q86UW7 1296 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms