RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 SPDYE1Q8NFV5 336 aaPredicted RBP6.45□□□□□ -1.38
MTHFD1-212ENST00000555858 RIOK3O14730 519 aaKnown RBP6.44□□□□□ -1.38
MTHFD1-212ENST00000555858 CACNB1Q02641 598 aaPredicted RBP6.44□□□□□ -1.38
MTHFD1-212ENST00000555858 DCAF8Q5TAQ9 597 aa6.44□□□□□ -1.38
MTHFD1-212ENST00000555858 NBR1Q14596 966 aa6.43□□□□□ -1.38
MTHFD1-212ENST00000555858 AKT1S1Q96B36 256 aa6.41□□□□□ -1.38
MTHFD1-212ENST00000555858 FAM212AQ96EL1 285 aa6.41□□□□□ -1.38
MTHFD1-212ENST00000555858 VGFO15240 615 aaPredicted RBP6.4□□□□□ -1.38
MTHFD1-212ENST00000555858 NKX1-1Q15270 411 aaPredicted RBP6.4□□□□□ -1.38
MTHFD1-212ENST00000555858 RBM42Q9BTD8 480 aaKnown RBP6.4□□□□□ -1.38
MTHFD1-212ENST00000555858 GTPBP6O43824 516 aaPredicted RBP6.39□□□□□ -1.39
MTHFD1-212ENST00000555858 CHRM1P11229 460 aaPredicted RBP6.39□□□□□ -1.39
MTHFD1-212ENST00000555858 CREBZFQ9NS37 354 aa6.39□□□□□ -1.39
MTHFD1-212ENST00000555858 STK25O00506 426 aa6.38□□□□□ -1.39
MTHFD1-212ENST00000555858 PRR29P0C7W0 189 aa6.38□□□□□ -1.39
MTHFD1-212ENST00000555858 MNX1P50219 401 aaPredicted RBP6.37□□□□□ -1.39
MTHFD1-212ENST00000555858 CLEC11AQ9Y240 323 aa6.37□□□□□ -1.39
MTHFD1-212ENST00000555858 SGIP1Q9BQI5 828 aa6.36□□□□□ -1.39
MTHFD1-212ENST00000555858 RYDENQ9NUL5 291 aaKnown RBP6.35□□□□□ -1.39
MTHFD1-212ENST00000555858 RASEFQ8IZ41 740 aa6.34□□□□□ -1.39
MTHFD1-212ENST00000555858 REM2Q8IYK8 340 aaPredicted RBP6.33□□□□□ -1.4
MTHFD1-212ENST00000555858 STK24Q9Y6E0 443 aa6.33□□□□□ -1.4
MTHFD1-212ENST00000555858 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.32□□□□□ -1.4
MTHFD1-212ENST00000555858 ZFP91Q96JP5 570 aaPredicted RBP6.32□□□□□ -1.4
MTHFD1-212ENST00000555858 BCL11BQ9C0K0 894 aaPredicted RBP6.32□□□□□ -1.4
MTHFD1-212ENST00000555858 PYGBP11216 843 aa6.3□□□□□ -1.4
MTHFD1-212ENST00000555858 P3H3Q8IVL6 736 aa6.26□□□□□ -1.41
MTHFD1-212ENST00000555858 PITPNM1O00562 1244 aa6.25□□□□□ -1.41
MTHFD1-212ENST00000555858 ZNF467Q7Z7K2 595 aaPredicted RBP6.24□□□□□ -1.41
MTHFD1-212ENST00000555858 PDAP1Q13442 181 aaKnown RBP6.21□□□□□ -1.42
MTHFD1-212ENST00000555858 TSPYL2Q9H2G4 693 aaPredicted RBP6.2□□□□□ -1.42
MTHFD1-212ENST00000555858 WDR70Q9NW82 654 aa6.2□□□□□ -1.42
MTHFD1-212ENST00000555858 CHADLQ6NUI6 762 aa6.17□□□□□ -1.42
MTHFD1-212ENST00000555858 CADPS2Q86UW7 1296 aa6.17□□□□□ -1.42
MTHFD1-212ENST00000555858 KCNV2Q8TDN2 545 aa6.17□□□□□ -1.42
MTHFD1-212ENST00000555858 FARP1Q9Y4F1 1045 aaPredicted RBP6.17□□□□□ -1.42
MTHFD1-212ENST00000555858 PCDHB8Q9UN66 801 aa6.16□□□□□ -1.42
MTHFD1-212ENST00000555858 PCDHB13Q9Y5F0 798 aa6.16□□□□□ -1.42
MTHFD1-212ENST00000555858 PSEN1P49768 467 aa6.15□□□□□ -1.42
MTHFD1-212ENST00000555858 ZNF579Q8NAF0 562 aaKnown RBP6.15□□□□□ -1.42
MTHFD1-212ENST00000555858 MFRPQ9BY79 579 aa6.14□□□□□ -1.43
MTHFD1-212ENST00000555858 GTF3C3Q9Y5Q9 886 aa6.14□□□□□ -1.43
MTHFD1-212ENST00000555858 CCDC61Q9Y6R9 512 aa6.14□□□□□ -1.43
MTHFD1-212ENST00000555858 TMEM132AQ24JP5 1023 aa6.13□□□□□ -1.43
MTHFD1-212ENST00000555858 LMOD2Q6P5Q4 547 aa6.13□□□□□ -1.43
MTHFD1-212ENST00000555858 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.13□□□□□ -1.43
MTHFD1-212ENST00000555858 TULP1O00294 542 aaPredicted RBP6.12□□□□□ -1.43
MTHFD1-212ENST00000555858 ERICH6Q7L0X2 663 aa6.12□□□□□ -1.43
MTHFD1-212ENST00000555858 TIMELESSQ9UNS1 1208 aa6.12□□□□□ -1.43
MTHFD1-212ENST00000555858 PAK3O75914 559 aaPredicted RBP6.1□□□□□ -1.43
MTHFD1-212ENST00000555858 NLRP6P59044 892 aa6.1□□□□□ -1.43
MTHFD1-212ENST00000555858 ARHGEF1Q92888 912 aaKnown RBP6.1□□□□□ -1.43
MTHFD1-212ENST00000555858 SOX12O15370 315 aa6.09□□□□□ -1.43
MTHFD1-212ENST00000555858 PRKAR2AP13861 404 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-212ENST00000555858 FBXO22Q8NEZ5 403 aa6.09□□□□□ -1.43
MTHFD1-212ENST00000555858 PPP1R37O75864 691 aa6.08□□□□□ -1.44
MTHFD1-212ENST00000555858 E2F4Q16254 413 aa6.08□□□□□ -1.44
MTHFD1-212ENST00000555858 IFNL1Q8IU54 200 aa6.08□□□□□ -1.44
MTHFD1-212ENST00000555858 EFCAB3Q8N7B9 438 aa6.08□□□□□ -1.44
MTHFD1-212ENST00000555858 CABP2Q9NPB3 220 aa6.07□□□□□ -1.44
MTHFD1-212ENST00000555858 MAP3K13O43283 966 aa6.06□□□□□ -1.44
MTHFD1-212ENST00000555858 FXR2P51116 673 aaKnown RBP eCLIP6.06□□□□□ -1.445e-6■■■□□ 14.9
MTHFD1-212ENST00000555858 PHF8Q9UPP1 1060 aa6.06□□□□□ -1.44
MTHFD1-212ENST00000555858 KIF12Q96FN5 646 aa6.05□□□□□ -1.44
MTHFD1-212ENST00000555858 TESPA1A2RU30 521 aaPredicted RBP6.03□□□□□ -1.44
MTHFD1-212ENST00000555858 ZC3H15Q8WU90 426 aaKnown RBP6.03□□□□□ -1.44
MTHFD1-212ENST00000555858 SEMA3EO15041 775 aa6.02□□□□□ -1.45
MTHFD1-212ENST00000555858 BRPF1P55201 1214 aaPredicted RBP6.02□□□□□ -1.45
MTHFD1-212ENST00000555858 NCKAP5LQ9HCH0 1330 aa6.01□□□□□ -1.45
MTHFD1-212ENST00000555858 PDE4AP27815 886 aa6.01□□□□□ -1.45
MTHFD1-212ENST00000555858 MFSD10Q14728 455 aa6□□□□□ -1.45
MTHFD1-212ENST00000555858 SMYD5Q6GMV2 418 aa6□□□□□ -1.45
MTHFD1-212ENST00000555858 LARP6Q9BRS8 491 aaKnown RBP6□□□□□ -1.45
MTHFD1-212ENST00000555858 MS4A4AQ96JQ5 239 aa5.99□□□□□ -1.45
MTHFD1-212ENST00000555858 CRISPLD2Q9H0B8 497 aa5.99□□□□□ -1.45
MTHFD1-212ENST00000555858 ARIH1Q9Y4X5 557 aaPredicted RBP5.99□□□□□ -1.45
MTHFD1-212ENST00000555858 GOLGA2Q08379 1002 aa5.98□□□□□ -1.45
MTHFD1-212ENST00000555858 DDX27Q96GQ7 796 aaKnown RBP5.98□□□□□ -1.45
MTHFD1-212ENST00000555858 NEUROD2Q15784 382 aa5.97□□□□□ -1.45
MTHFD1-212ENST00000555858 C14orf37Q86TY3 774 aa5.97□□□□□ -1.45
MTHFD1-212ENST00000555858 PIP4P2Q8N4L2 257 aa5.97□□□□□ -1.45
MTHFD1-212ENST00000555858 SLC24A3Q9HC58 644 aa5.97□□□□□ -1.45
MTHFD1-212ENST00000555858 ZRANB1Q9UGI0 708 aa5.97□□□□□ -1.45
MTHFD1-212ENST00000555858 CAMK2BQ13554 666 aa5.96□□□□□ -1.46
MTHFD1-212ENST00000555858 CHRDL2Q6WN34 429 aa5.96□□□□□ -1.46
MTHFD1-212ENST00000555858 ZMYND10O75800 440 aa5.95□□□□□ -1.46
MTHFD1-212ENST00000555858 CD44P16070 742 aaKnown RBP5.95□□□□□ -1.46
MTHFD1-212ENST00000555858 PHF12Q96QT6 1004 aa5.95□□□□□ -1.46
MTHFD1-212ENST00000555858 TMEM106CQ9BVX2 250 aa5.95□□□□□ -1.46
MTHFD1-212ENST00000555858 MKRN3Q13064 507 aaKnown RBP5.94□□□□□ -1.46
MTHFD1-212ENST00000555858 ARXQ96QS3 562 aa5.94□□□□□ -1.46
MTHFD1-212ENST00000555858 BARGINQ6ZT62 677 aa5.92□□□□□ -1.46
MTHFD1-212ENST00000555858 MS4A3Q96HJ5 214 aa5.9□□□□□ -1.46
MTHFD1-212ENST00000555858 PPP1R15BQ5SWA1 713 aa5.89□□□□□ -1.47
MTHFD1-212ENST00000555858 ILDR1Q86SU0 546 aaPredicted RBP5.89□□□□□ -1.47
MTHFD1-212ENST00000555858 GPIHBP1Q8IV16 184 aa5.89□□□□□ -1.47
MTHFD1-212ENST00000555858 GPHNQ9NQX3 736 aaPredicted RBP5.89□□□□□ -1.47
MTHFD1-212ENST00000555858 TRPC6Q9Y210 931 aa5.89□□□□□ -1.47
MTHFD1-212ENST00000555858 TIE1P35590 1138 aa5.88□□□□□ -1.47
MTHFD1-212ENST00000555858 MLLT3P42568 568 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms