RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 GTPBP6O43824 516 aaPredicted RBP13.62□□□□□ -0.23
PAX3-210ENST00000555548 RIOK3O14730 519 aaKnown RBP13.6□□□□□ -0.23
PAX3-210ENST00000555548 TIMELESSQ9UNS1 1208 aa13.6□□□□□ -0.23
PAX3-210ENST00000555548 NUBP1P53384 320 aa13.58□□□□□ -0.24
PAX3-210ENST00000555548 TULP1O00294 542 aaPredicted RBP13.56□□□□□ -0.24
PAX3-210ENST00000555548 GTF3C3Q9Y5Q9 886 aa13.54□□□□□ -0.24
PAX3-210ENST00000555548 DCAF8Q5TAQ9 597 aa13.5□□□□□ -0.25
PAX3-210ENST00000555548 STK25O00506 426 aa13.49□□□□□ -0.25
PAX3-210ENST00000555548 VGFO15240 615 aaPredicted RBP13.49□□□□□ -0.25
PAX3-210ENST00000555548 ERICH6Q7L0X2 663 aa13.48□□□□□ -0.25
PAX3-210ENST00000555548 CHRM1P11229 460 aaPredicted RBP13.45□□□□□ -0.26
PAX3-210ENST00000555548 SGIP1Q9BQI5 828 aa13.44□□□□□ -0.26
PAX3-210ENST00000555548 TMEM132AQ24JP5 1023 aa13.43□□□□□ -0.26
PAX3-210ENST00000555548 RYDENQ9NUL5 291 aaKnown RBP13.43□□□□□ -0.26
PAX3-210ENST00000555548 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
PAX3-210ENST00000555548 P3H3Q8IVL6 736 aa13.36□□□□□ -0.27
PAX3-210ENST00000555548 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
PAX3-210ENST00000555548 STK24Q9Y6E0 443 aa13.34□□□□□ -0.27
PAX3-210ENST00000555548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.33□□□□□ -0.28
PAX3-210ENST00000555548 ZFP91Q96JP5 570 aaPredicted RBP13.33□□□□□ -0.28
PAX3-210ENST00000555548 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
PAX3-210ENST00000555548 ARXQ96QS3 562 aa13.32□□□□□ -0.28
PAX3-210ENST00000555548 CREBZFQ9NS37 354 aa13.32□□□□□ -0.28
PAX3-210ENST00000555548 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
PAX3-210ENST00000555548 RASEFQ8IZ41 740 aa13.27□□□□□ -0.29
PAX3-210ENST00000555548 PRR29P0C7W0 189 aa13.21□□□□□ -0.29
PAX3-210ENST00000555548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.21□□□□□ -0.29
PAX3-210ENST00000555548 LMOD2Q6P5Q4 547 aa13.2□□□□□ -0.3
PAX3-210ENST00000555548 KCNV2Q8TDN2 545 aa13.2□□□□□ -0.3
PAX3-210ENST00000555548 PYGBP11216 843 aa13.19□□□□□ -0.3
PAX3-210ENST00000555548 WDR70Q9NW82 654 aa13.19□□□□□ -0.3
PAX3-210ENST00000555548 C14orf37Q86TY3 774 aa13.16□□□□□ -0.3
PAX3-210ENST00000555548 CADPS2Q86UW7 1296 aa13.16□□□□□ -0.3
PAX3-210ENST00000555548 AKT1S1Q96B36 256 aa13.16□□□□□ -0.3
PAX3-210ENST00000555548 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
PAX3-210ENST00000555548 DAXXQ9UER7 740 aaPredicted RBP13.09□□□□□ -0.31
PAX3-210ENST00000555548 BRPF1P55201 1214 aaPredicted RBP13.08□□□□□ -0.32
PAX3-210ENST00000555548 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.32
PAX3-210ENST00000555548 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
PAX3-210ENST00000555548 ZNF467Q7Z7K2 595 aaPredicted RBP13.06□□□□□ -0.32
PAX3-210ENST00000555548 HOMEZQ8IX15 550 aa13.03□□□□□ -0.32
PAX3-210ENST00000555548 REM2Q8IYK8 340 aaPredicted RBP13.03□□□□□ -0.32
PAX3-210ENST00000555548 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
PAX3-210ENST00000555548 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
PAX3-210ENST00000555548 ZC3H15Q8WU90 426 aaKnown RBP12.99□□□□□ -0.33
PAX3-210ENST00000555548 MFRPQ9BY79 579 aa12.97□□□□□ -0.33
PAX3-210ENST00000555548 CACNB1Q02641 598 aaPredicted RBP12.96□□□□□ -0.33
PAX3-210ENST00000555548 TESPA1A2RU30 521 aaPredicted RBP12.93□□□□□ -0.34
PAX3-210ENST00000555548 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
PAX3-210ENST00000555548 E2F4Q16254 413 aa12.92□□□□□ -0.34
PAX3-210ENST00000555548 PCDHB8Q9UN66 801 aa12.9□□□□□ -0.34
PAX3-210ENST00000555548 PCDHB13Q9Y5F0 798 aa12.9□□□□□ -0.34
PAX3-210ENST00000555548 PSEN1P49768 467 aa12.89□□□□□ -0.35
PAX3-210ENST00000555548 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
PAX3-210ENST00000555548 SLC24A3Q9HC58 644 aa12.88□□□□□ -0.35
PAX3-210ENST00000555548 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
PAX3-210ENST00000555548 SEMA3EO15041 775 aa12.87□□□□□ -0.35
PAX3-210ENST00000555548 PPP1R37O75864 691 aa12.86□□□□□ -0.35
PAX3-210ENST00000555548 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
PAX3-210ENST00000555548 FBXO22Q8NEZ5 403 aa12.84□□□□□ -0.35
PAX3-210ENST00000555548 ZMYND10O75800 440 aa12.82□□□□□ -0.36
PAX3-210ENST00000555548 NLRP6P59044 892 aa12.82□□□□□ -0.36
PAX3-210ENST00000555548 CCDC61Q9Y6R9 512 aa12.8□□□□□ -0.36
PAX3-210ENST00000555548 SMYD5Q6GMV2 418 aa12.79□□□□□ -0.36
PAX3-210ENST00000555548 SOX12O15370 315 aa12.78□□□□□ -0.36
PAX3-210ENST00000555548 SUPT5HO00267 1087 aaKnown RBP12.76□□□□□ -0.37
PAX3-210ENST00000555548 EFCAB3Q8N7B9 438 aa12.76□□□□□ -0.37
PAX3-210ENST00000555548 FARP1Q9Y4F1 1045 aaPredicted RBP12.76□□□□□ -0.37
PAX3-210ENST00000555548 ARIH1Q9Y4X5 557 aaPredicted RBP12.75□□□□□ -0.37
PAX3-210ENST00000555548 CHADLQ6NUI6 762 aa12.74□□□□□ -0.37
PAX3-210ENST00000555548 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
PAX3-210ENST00000555548 NCKAP5LQ9HCH0 1330 aa12.73□□□□□ -0.37
PAX3-210ENST00000555548 BARGINQ6ZT62 677 aa12.73□□□□□ -0.37
PAX3-210ENST00000555548 MFSD10Q14728 455 aa12.72□□□□□ -0.37
PAX3-210ENST00000555548 PDE4AP27815 886 aa12.7□□□□□ -0.38
PAX3-210ENST00000555548 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
PAX3-210ENST00000555548 CABP2Q9NPB3 220 aa12.7□□□□□ -0.38
PAX3-210ENST00000555548 IFNL1Q8IU54 200 aa12.69□□□□□ -0.38
PAX3-210ENST00000555548 AK7Q96M32 723 aa12.65□□□□□ -0.38
PAX3-210ENST00000555548 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
PAX3-210ENST00000555548 CAMK2BQ13554 666 aa12.64□□□□□ -0.39
PAX3-210ENST00000555548 DDX27Q96GQ7 796 aaKnown RBP12.62□□□□□ -0.39
PAX3-210ENST00000555548 MAP3K13O43283 966 aa12.61□□□□□ -0.39
PAX3-210ENST00000555548 KIF12Q96FN5 646 aa12.6□□□□□ -0.39
PAX3-210ENST00000555548 MS4A4AQ96JQ5 239 aa12.6□□□□□ -0.39
PAX3-210ENST00000555548 PAK3O75914 559 aaPredicted RBP12.57□□□□□ -0.4
PAX3-210ENST00000555548 GPBP1L1Q9HC44 474 aaPredicted RBP12.57□□□□□ -0.4
PAX3-210ENST00000555548 RBM26Q5T8P6 1007 aaKnown RBP12.55□□□□□ -0.4
PAX3-210ENST00000555548 GPIHBP1Q8IV16 184 aa12.55□□□□□ -0.4
PAX3-210ENST00000555548 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
PAX3-210ENST00000555548 KRI1Q8N9T8 703 aaKnown RBP12.53□□□□□ -0.4
PAX3-210ENST00000555548 MLLT3P42568 568 aaPredicted RBP12.52□□□□□ -0.41
PAX3-210ENST00000555548 IL27Q8NEV9 243 aa12.52□□□□□ -0.41
PAX3-210ENST00000555548 ZMYND15Q9H091 742 aa12.52□□□□□ -0.41
PAX3-210ENST00000555548 KDM4CQ9H3R0 1056 aa12.52□□□□□ -0.41
PAX3-210ENST00000555548 TRIM66O15016 1216 aa12.48□□□□□ -0.41
PAX3-210ENST00000555548 RSPH6AQ9H0K4 717 aa12.47□□□□□ -0.41
PAX3-210ENST00000555548 PDE4DQ08499 809 aa12.46□□□□□ -0.41
PAX3-210ENST00000555548 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
PAX3-210ENST00000555548 UBTFP17480 764 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms