RNA–Protein interactions for RNA: ENST00000555430.1

EFCAB11-206, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-206ENST00000555430 ASTLQ6HA08 431 aaPredicted RBP11.23□□□□□ -0.61
EFCAB11-206ENST00000555430 ATMINO43313 823 aaPredicted RBP11.16□□□□□ -0.62
EFCAB11-206ENST00000555430 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
EFCAB11-206ENST00000555430 MMRN1Q13201 1228 aa11.11□□□□□ -0.63
EFCAB11-206ENST00000555430 ZBTB22O15209 634 aa11.08□□□□□ -0.64
EFCAB11-206ENST00000555430 MS4A3Q96HJ5 214 aa11.06□□□□□ -0.64
EFCAB11-206ENST00000555430 SPNS2Q8IVW8 549 aa11.03□□□□□ -0.64
EFCAB11-206ENST00000555430 STAG3Q9UJ98 1225 aa10.99□□□□□ -0.65
EFCAB11-206ENST00000555430 NPM1P06748 294 aaKnown RBP eCLIP10.98□□□□□ -0.65
EFCAB11-206ENST00000555430 ATN1P54259 1190 aaPredicted RBP10.97□□□□□ -0.65
EFCAB11-206ENST00000555430 POTEFA5A3E0 1075 aa10.95□□□□□ -0.66
EFCAB11-206ENST00000555430 ST18O60284 1047 aa10.92□□□□□ -0.66
EFCAB11-206ENST00000555430 MNX1P50219 401 aaPredicted RBP10.83□□□□□ -0.68
EFCAB11-206ENST00000555430 BMP2KQ9NSY1 1161 aaPredicted RBP10.82□□□□□ -0.68
EFCAB11-206ENST00000555430 SEC24BO95487 1268 aa10.8□□□□□ -0.68
EFCAB11-206ENST00000555430 SLAIN1Q8ND83 568 aa10.8□□□□□ -0.68
EFCAB11-206ENST00000555430 TMEM121BQ9BXQ6 578 aaPredicted RBP10.79□□□□□ -0.68
EFCAB11-206ENST00000555430 COLQQ9Y215 455 aaPredicted RBP10.79□□□□□ -0.68
EFCAB11-206ENST00000555430 TIE1P35590 1138 aa10.74□□□□□ -0.69
EFCAB11-206ENST00000555430 KIF12Q96FN5 646 aa10.71□□□□□ -0.69
EFCAB11-206ENST00000555430 CCDC61Q9Y6R9 512 aa10.7□□□□□ -0.7
EFCAB11-206ENST00000555430 TSPYL2Q9H2G4 693 aaPredicted RBP10.69□□□□□ -0.7
EFCAB11-206ENST00000555430 TRPC6Q9Y210 931 aa10.69□□□□□ -0.7
EFCAB11-206ENST00000555430 IER5LQ5T953 404 aa10.68□□□□□ -0.7
EFCAB11-206ENST00000555430 TTLL13PA6NNM8 815 aa10.63□□□□□ -0.71
EFCAB11-206ENST00000555430 SNPHO15079 494 aa10.63□□□□□ -0.71
EFCAB11-206ENST00000555430 MARVELD3Q96A59 401 aa10.63□□□□□ -0.71
EFCAB11-206ENST00000555430 MAP3K13O43283 966 aa10.58□□□□□ -0.72
EFCAB11-206ENST00000555430 TRIM35Q9UPQ4 493 aa10.57□□□□□ -0.72
EFCAB11-206ENST00000555430 KRTAP3-3Q9BYR6 98 aa10.54□□□□□ -0.72
EFCAB11-206ENST00000555430 KRTAP3-2Q9BYR7 98 aa10.54□□□□□ -0.72
EFCAB11-206ENST00000555430 PLCG2P16885 1265 aa10.5□□□□□ -0.73
EFCAB11-206ENST00000555430 EMP3P54852 163 aa10.5□□□□□ -0.73
EFCAB11-206ENST00000555430 SPDYE4A6NLX3 237 aa10.45□□□□□ -0.74
EFCAB11-206ENST00000555430 CSRNP3Q8WYN3 585 aa10.44□□□□□ -0.74
EFCAB11-206ENST00000555430 HS3ST6Q96QI5 342 aa10.44□□□□□ -0.74
EFCAB11-206ENST00000555430 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.43□□□□□ -0.74
EFCAB11-206ENST00000555430 SGIP1Q9BQI5 828 aa10.42□□□□□ -0.74
EFCAB11-206ENST00000555430 POTEB3A0JP26 581 aa10.41□□□□□ -0.74
EFCAB11-206ENST00000555430 POTEBQ6S5H4 581 aa10.41□□□□□ -0.74
EFCAB11-206ENST00000555430 FAM205CA6NFA0 338 aa10.39□□□□□ -0.75
EFCAB11-206ENST00000555430 IRX5P78411 483 aaPredicted RBP10.39□□□□□ -0.75
EFCAB11-206ENST00000555430 RNF166Q96A37 237 aaPredicted RBP10.37□□□□□ -0.75
EFCAB11-206ENST00000555430 PCDHB13Q9Y5F0 798 aa10.35□□□□□ -0.75
EFCAB11-206ENST00000555430 EHMT2Q96KQ7 1210 aa10.34□□□□□ -0.75
EFCAB11-206ENST00000555430 TMEM106CQ9BVX2 250 aa10.33□□□□□ -0.76
EFCAB11-206ENST00000555430 OCEL1Q9H607 264 aa10.33□□□□□ -0.76
EFCAB11-206ENST00000555430 RASEFQ8IZ41 740 aa10.32□□□□□ -0.76
EFCAB11-206ENST00000555430 IFNL1Q8IU54 200 aa10.25□□□□□ -0.77
EFCAB11-206ENST00000555430 MYT1LQ9UL68 1186 aa10.22□□□□□ -0.77
EFCAB11-206ENST00000555430 PLEKHG5O94827 1062 aa10.21□□□□□ -0.77
EFCAB11-206ENST00000555430 C3orf67Q6ZVT6 689 aa10.21□□□□□ -0.77
EFCAB11-206ENST00000555430 L3MBTL3Q96JM7 780 aaPredicted RBP10.11□□□□□ -0.79
EFCAB11-206ENST00000555430 PTGER2P43116 358 aa10.09□□□□□ -0.79
EFCAB11-206ENST00000555430 MIER1Q8N108 512 aa10.08□□□□□ -0.8
EFCAB11-206ENST00000555430 ERBB3P21860 1342 aa10.07□□□□□ -0.8
EFCAB11-206ENST00000555430 PDCD7Q8N8D1 485 aaKnown RBP10.07□□□□□ -0.8
EFCAB11-206ENST00000555430 HOXB1P14653 301 aaPredicted RBP10.05□□□□□ -0.8
EFCAB11-206ENST00000555430 PROM2Q8N271 834 aa10.04□□□□□ -0.8
EFCAB11-206ENST00000555430 HOXB3P14651 431 aaPredicted RBP10.01□□□□□ -0.81
EFCAB11-206ENST00000555430 ZNF710Q8N1W2 664 aa10□□□□□ -0.81
EFCAB11-206ENST00000555430 NUBP1P53384 320 aa9.99□□□□□ -0.81
EFCAB11-206ENST00000555430 FAM212AQ96EL1 285 aa9.98□□□□□ -0.81
EFCAB11-206ENST00000555430 VARS2Q5ST30 1063 aaKnown RBP9.96□□□□□ -0.82
EFCAB11-206ENST00000555430 PLA2G2EQ9NZK7 142 aa9.96□□□□□ -0.82
EFCAB11-206ENST00000555430 DOK7Q18PE1 504 aa9.93□□□□□ -0.82
EFCAB11-206ENST00000555430 ZNF687Q8N1G0 1237 aa9.93□□□□□ -0.82
EFCAB11-206ENST00000555430 ZBTB47Q9UFB7 747 aaPredicted RBP9.93□□□□□ -0.82
EFCAB11-206ENST00000555430 MKRN3Q13064 507 aaKnown RBP9.92□□□□□ -0.82
EFCAB11-206ENST00000555430 GOLGA2Q08379 1002 aa9.9□□□□□ -0.82
EFCAB11-206ENST00000555430 PLCD3Q8N3E9 789 aa9.89□□□□□ -0.83
EFCAB11-206ENST00000555430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.88□□□□□ -0.83
EFCAB11-206ENST00000555430 RIMBP2O15034 1052 aa9.87□□□□□ -0.83
EFCAB11-206ENST00000555430 PCDHB8Q9UN66 801 aa9.86□□□□□ -0.83
EFCAB11-206ENST00000555430 ANKRD13DQ6ZTN6 518 aa9.84□□□□□ -0.83
EFCAB11-206ENST00000555430 G3V3G9 751 aa9.81□□□□□ -0.84
EFCAB11-206ENST00000555430 PYGBP11216 843 aa9.81□□□□□ -0.84
EFCAB11-206ENST00000555430 DCAF8Q5TAQ9 597 aa9.81□□□□□ -0.84
EFCAB11-206ENST00000555430 ILDR1Q86SU0 546 aaPredicted RBP9.79□□□□□ -0.84
EFCAB11-206ENST00000555430 HCSTQ9UBK5 93 aa9.79□□□□□ -0.84
EFCAB11-206ENST00000555430 ZSWIM6Q9HCJ5 1215 aa9.78□□□□□ -0.84
EFCAB11-206ENST00000555430 BOLA1Q9Y3E2 137 aa9.78□□□□□ -0.84
EFCAB11-206ENST00000555430 DPY19L2Q6NUT2 758 aa9.74□□□□□ -0.85
EFCAB11-206ENST00000555430 LSM11P83369 360 aaKnown RBP eCLIP9.73□□□□□ -0.85
EFCAB11-206ENST00000555430 ZNF467Q7Z7K2 595 aaPredicted RBP9.71□□□□□ -0.86
EFCAB11-206ENST00000555430 IRX2Q9BZI1 471 aaPredicted RBP9.7□□□□□ -0.86
EFCAB11-206ENST00000555430 RGS20O76081 388 aa9.68□□□□□ -0.86
EFCAB11-206ENST00000555430 GPR153Q6NV75 609 aa9.68□□□□□ -0.86
EFCAB11-206ENST00000555430 PSEN1P49768 467 aa9.63□□□□□ -0.87
EFCAB11-206ENST00000555430 ZNF316A6NFI3 1004 aaPredicted RBP9.59□□□□□ -0.87
EFCAB11-206ENST00000555430 PBX2P40425 430 aa9.59□□□□□ -0.87
EFCAB11-206ENST00000555430 ARSIQ5FYB1 569 aa9.54□□□□□ -0.88
EFCAB11-206ENST00000555430 CHRM1P11229 460 aaPredicted RBP9.5□□□□□ -0.89
EFCAB11-206ENST00000555430 PDAP1Q13442 181 aaKnown RBP9.5□□□□□ -0.89
EFCAB11-206ENST00000555430 CABP2Q9NPB3 220 aa9.5□□□□□ -0.89
EFCAB11-206ENST00000555430 TMEM92Q6UXU6 159 aa9.49□□□□□ -0.89
EFCAB11-206ENST00000555430 FKBP8Q14318 412 aa9.46□□□□□ -0.9
EFCAB11-206ENST00000555430 GSE1Q14687 1217 aa9.46□□□□□ -0.9
EFCAB11-206ENST00000555430 IFFO2Q5TF58 517 aa9.45□□□□□ -0.9
EFCAB11-206ENST00000555430 ADGRD1Q6QNK2 874 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms