RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 CCDC61Q9Y6R9 512 aa16.03■□□□□ 0.16
SEC23A-209ENST00000555363 MS4A3Q96HJ5 214 aa16■□□□□ 0.15
SEC23A-209ENST00000555363 KLHL34Q8N239 644 aa15.99■□□□□ 0.15
SEC23A-209ENST00000555363 VASPP50552 380 aaPredicted RBP15.98■□□□□ 0.15
SEC23A-209ENST00000555363 NUBP1P53384 320 aa15.96■□□□□ 0.15
SEC23A-209ENST00000555363 FAM212AQ96EL1 285 aa15.96■□□□□ 0.15
SEC23A-209ENST00000555363 LHX8Q68G74 356 aa15.94■□□□□ 0.14
SEC23A-209ENST00000555363 KIF12Q96FN5 646 aa15.93■□□□□ 0.14
SEC23A-209ENST00000555363 DCAF8Q5TAQ9 597 aa15.89■□□□□ 0.13
SEC23A-209ENST00000555363 MAP3K13O43283 966 aa15.88■□□□□ 0.13
SEC23A-209ENST00000555363 PCDHB13Q9Y5F0 798 aa15.81■□□□□ 0.12
SEC23A-209ENST00000555363 ATMINO43313 823 aaPredicted RBP15.78■□□□□ 0.12
SEC23A-209ENST00000555363 ASTLQ6HA08 431 aaPredicted RBP15.78■□□□□ 0.12
SEC23A-209ENST00000555363 PELP1Q8IZL8 1130 aaKnown RBP15.75■□□□□ 0.11
SEC23A-209ENST00000555363 SGIP1Q9BQI5 828 aa15.75■□□□□ 0.11
SEC23A-209ENST00000555363 SLC39A7Q92504 469 aa15.73■□□□□ 0.11
SEC23A-209ENST00000555363 PYGBP11216 843 aa15.72■□□□□ 0.11
SEC23A-209ENST00000555363 GSE1Q14687 1217 aa15.72■□□□□ 0.11
SEC23A-209ENST00000555363 TRPC6Q9Y210 931 aa15.72■□□□□ 0.11
SEC23A-209ENST00000555363 TIE1P35590 1138 aa15.71■□□□□ 0.11
SEC23A-209ENST00000555363 ATN1P54259 1190 aaPredicted RBP15.7■□□□□ 0.1
SEC23A-209ENST00000555363 BMP2KQ9NSY1 1161 aaPredicted RBP15.7■□□□□ 0.1
SEC23A-209ENST00000555363 METRNQ9UJH8 293 aa15.7■□□□□ 0.1
SEC23A-209ENST00000555363 C7P10643 843 aa15.68■□□□□ 0.1
SEC23A-209ENST00000555363 SPOCK2Q92563 424 aa15.68■□□□□ 0.1
SEC23A-209ENST00000555363 IFNL1Q8IU54 200 aa15.66■□□□□ 0.1
SEC23A-209ENST00000555363 IFNLR1Q8IU57 520 aaPredicted RBP15.66■□□□□ 0.1
SEC23A-209ENST00000555363 TTLL13PA6NNM8 815 aa15.62■□□□□ 0.09
SEC23A-209ENST00000555363 CIZ1Q9ULV3 898 aaPredicted RBP15.61■□□□□ 0.09
SEC23A-209ENST00000555363 TMEM106CQ9BVX2 250 aa15.58■□□□□ 0.08
SEC23A-209ENST00000555363 TRIM35Q9UPQ4 493 aa15.56■□□□□ 0.08
SEC23A-209ENST00000555363 POTEB2H3BUK9 544 aa15.54■□□□□ 0.08
SEC23A-209ENST00000555363 SEC24BO95487 1268 aa15.54■□□□□ 0.08
SEC23A-209ENST00000555363 PCDHB8Q9UN66 801 aa15.54■□□□□ 0.08
SEC23A-209ENST00000555363 ZNF467Q7Z7K2 595 aaPredicted RBP15.51■□□□□ 0.07
SEC23A-209ENST00000555363 CHRM1P11229 460 aaPredicted RBP15.46■□□□□ 0.07
SEC23A-209ENST00000555363 OTUD5Q96G74 571 aa15.46■□□□□ 0.07
SEC23A-209ENST00000555363 IER5LQ5T953 404 aa15.45■□□□□ 0.06
SEC23A-209ENST00000555363 MAMSTRQ6ZN01 415 aa15.44■□□□□ 0.06
SEC23A-209ENST00000555363 SCUBE2Q9NQ36 999 aa15.41■□□□□ 0.06
SEC23A-209ENST00000555363 GOLGA2Q08379 1002 aa15.39■□□□□ 0.05
SEC23A-209ENST00000555363 COLQQ9Y215 455 aaPredicted RBP15.39■□□□□ 0.05
SEC23A-209ENST00000555363 POTEFA5A3E0 1075 aa15.38■□□□□ 0.05
SEC23A-209ENST00000555363 PLCG2P16885 1265 aa15.38■□□□□ 0.05
SEC23A-209ENST00000555363 PSEN1P49768 467 aa15.34■□□□□ 0.05
SEC23A-209ENST00000555363 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
SEC23A-209ENST00000555363 POTEJP0CG39 1038 aa15.33■□□□□ 0.04
SEC23A-209ENST00000555363 MKRN3Q13064 507 aaKnown RBP15.3■□□□□ 0.04
SEC23A-209ENST00000555363 PDAP1Q13442 181 aaKnown RBP15.3■□□□□ 0.04
SEC23A-209ENST00000555363 OCEL1Q9H607 264 aa15.26■□□□□ 0.03
SEC23A-209ENST00000555363 IRX5P78411 483 aaPredicted RBP15.25■□□□□ 0.03
SEC23A-209ENST00000555363 CABP2Q9NPB3 220 aa15.18■□□□□ 0.02
SEC23A-209ENST00000555363 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.17■□□□□ 0.02
SEC23A-209ENST00000555363 RIOK3O14730 519 aaKnown RBP15.11■□□□□ 0.01
SEC23A-209ENST00000555363 SLAIN1Q8ND83 568 aa15.11■□□□□ 0.01
SEC23A-209ENST00000555363 FAM163AQ96GL9 167 aaPredicted RBP15.09■□□□□ 0.01
SEC23A-209ENST00000555363 L3MBTL3Q96JM7 780 aaPredicted RBP15.07■□□□□ 0
SEC23A-209ENST00000555363 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.07■□□□□ 0
SEC23A-209ENST00000555363 PDCD7Q8N8D1 485 aaKnown RBP15.06■□□□□ 0
SEC23A-209ENST00000555363 VGFO15240 615 aaPredicted RBP15.05■□□□□ -0
SEC23A-209ENST00000555363 G3V3G9 751 aa15.04■□□□□ -0
SEC23A-209ENST00000555363 ECM2O94769 699 aaPredicted RBP15.03■□□□□ -0
SEC23A-209ENST00000555363 C3orf67Q6ZVT6 689 aa15.03■□□□□ -0
SEC23A-209ENST00000555363 TAOK2Q9UL54 1235 aa15.03■□□□□ -0
SEC23A-209ENST00000555363 RNF25Q96BH1 459 aaPredicted RBP15.02■□□□□ -0
SEC23A-209ENST00000555363 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15□□□□□ -0.01
SEC23A-209ENST00000555363 ZFP91Q96JP5 570 aaPredicted RBP15□□□□□ -0.01
SEC23A-209ENST00000555363 POTEMA6NI47 508 aa14.99□□□□□ -0.01
SEC23A-209ENST00000555363 EFCAB3Q8N7B9 438 aa14.99□□□□□ -0.01
SEC23A-209ENST00000555363 POTEGQ6S5H5 508 aa14.97□□□□□ -0.01
SEC23A-209ENST00000555363 DPY19L2Q6NUT2 758 aa14.95□□□□□ -0.02
SEC23A-209ENST00000555363 ILDR1Q86SU0 546 aaPredicted RBP14.91□□□□□ -0.02
SEC23A-209ENST00000555363 BOLA1Q9Y3E2 137 aa14.9□□□□□ -0.02
SEC23A-209ENST00000555363 SNPHO15079 494 aa14.88□□□□□ -0.03
SEC23A-209ENST00000555363 STK24Q9Y6E0 443 aa14.88□□□□□ -0.03
SEC23A-209ENST00000555363 SOX12O15370 315 aa14.87□□□□□ -0.03
SEC23A-209ENST00000555363 PKD2Q13563 968 aa14.87□□□□□ -0.03
SEC23A-209ENST00000555363 BCL11BQ9C0K0 894 aaPredicted RBP14.87□□□□□ -0.03
SEC23A-209ENST00000555363 STK25O00506 426 aa14.85□□□□□ -0.03
SEC23A-209ENST00000555363 LCE2DQ5TA82 110 aaPredicted RBP14.84□□□□□ -0.03
SEC23A-209ENST00000555363 RGL2O15211 777 aa14.82□□□□□ -0.04
SEC23A-209ENST00000555363 PHF8Q9UPP1 1060 aa14.81□□□□□ -0.04
SEC23A-209ENST00000555363 ST18O60284 1047 aa14.8□□□□□ -0.04
SEC23A-209ENST00000555363 PLSCR2Q9NRY7 297 aa14.77□□□□□ -0.05
SEC23A-209ENST00000555363 NLRP6P59044 892 aa14.76□□□□□ -0.05
SEC23A-209ENST00000555363 PCDH10Q9P2E7 1040 aa14.74□□□□□ -0.05
SEC23A-209ENST00000555363 MICALL2Q8IY33 904 aa14.71□□□□□ -0.05
SEC23A-209ENST00000555363 MS4A4AQ96JQ5 239 aa14.7□□□□□ -0.06
SEC23A-209ENST00000555363 TMEM121BQ9BXQ6 578 aaPredicted RBP14.69□□□□□ -0.06
SEC23A-209ENST00000555363 MFRPQ9BY79 579 aa14.63□□□□□ -0.07
SEC23A-209ENST00000555363 FBXO22Q8NEZ5 403 aa14.62□□□□□ -0.07
SEC23A-209ENST00000555363 MARVELD3Q96A59 401 aa14.62□□□□□ -0.07
SEC23A-209ENST00000555363 CDAN1Q8IWY9 1227 aa14.61□□□□□ -0.07
SEC23A-209ENST00000555363 ZNF710Q8N1W2 664 aa14.61□□□□□ -0.07
SEC23A-209ENST00000555363 EMP3P54852 163 aa14.58□□□□□ -0.08
SEC23A-209ENST00000555363 DOK7Q18PE1 504 aa14.58□□□□□ -0.08
SEC23A-209ENST00000555363 RIMBP2O15034 1052 aa14.55□□□□□ -0.08
SEC23A-209ENST00000555363 CHGAP10645 457 aaKnown RBP14.54□□□□□ -0.08
SEC23A-209ENST00000555363 TMEM92Q6UXU6 159 aa14.53□□□□□ -0.08
SEC23A-209ENST00000555363 HOXB3P14651 431 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms