RNA–Protein interactions for RNA: ENST00000555240.1

CASC1-208, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-208ENST00000555240 KLHL34Q8N239 644 aa8.93□□□□□ -0.98
CASC1-208ENST00000555240 MNX1P50219 401 aaPredicted RBP8.9□□□□□ -0.98
CASC1-208ENST00000555240 PHF12Q96QT6 1004 aa8.87□□□□□ -0.99
CASC1-208ENST00000555240 POTEMA6NI47 508 aa8.86□□□□□ -0.99
CASC1-208ENST00000555240 PAK3O75914 559 aaPredicted RBP8.85□□□□□ -0.99
CASC1-208ENST00000555240 IFNLR1Q8IU57 520 aaPredicted RBP8.85□□□□□ -0.99
CASC1-208ENST00000555240 PELP1Q8IZL8 1130 aaKnown RBP8.85□□□□□ -0.99
CASC1-208ENST00000555240 POTEGQ6S5H5 508 aa8.82□□□□□ -1
CASC1-208ENST00000555240 SPOCK2Q92563 424 aa8.8□□□□□ -1
CASC1-208ENST00000555240 TSPYL2Q9H2G4 693 aaPredicted RBP8.8□□□□□ -1
CASC1-208ENST00000555240 NUBP1P53384 320 aa8.78□□□□□ -1
CASC1-208ENST00000555240 FAM212AQ96EL1 285 aa8.78□□□□□ -1
CASC1-208ENST00000555240 POTEJP0CG39 1038 aa8.77□□□□□ -1.01
CASC1-208ENST00000555240 RASEFQ8IZ41 740 aa8.77□□□□□ -1.01
CASC1-208ENST00000555240 DCAF8Q5TAQ9 597 aa8.76□□□□□ -1.01
CASC1-208ENST00000555240 METRNQ9UJH8 293 aa8.73□□□□□ -1.01
CASC1-208ENST00000555240 ASTLQ6HA08 431 aaPredicted RBP8.72□□□□□ -1.01
CASC1-208ENST00000555240 MS4A3Q96HJ5 214 aa8.72□□□□□ -1.01
CASC1-208ENST00000555240 CIZ1Q9ULV3 898 aaPredicted RBP8.72□□□□□ -1.01
CASC1-208ENST00000555240 GSE1Q14687 1217 aa8.71□□□□□ -1.02
CASC1-208ENST00000555240 LCE2DQ5TA82 110 aaPredicted RBP8.71□□□□□ -1.02
CASC1-208ENST00000555240 ATMINO43313 823 aaPredicted RBP8.7□□□□□ -1.02
CASC1-208ENST00000555240 CCDC61Q9Y6R9 512 aa8.68□□□□□ -1.02
CASC1-208ENST00000555240 C7P10643 843 aa8.67□□□□□ -1.02
CASC1-208ENST00000555240 SLC39A7Q92504 469 aa8.67□□□□□ -1.02
CASC1-208ENST00000555240 PCDH10Q9P2E7 1040 aa8.65□□□□□ -1.02
CASC1-208ENST00000555240 PYGBP11216 843 aa8.63□□□□□ -1.03
CASC1-208ENST00000555240 ATN1P54259 1190 aaPredicted RBP8.62□□□□□ -1.03
CASC1-208ENST00000555240 MAMSTRQ6ZN01 415 aa8.62□□□□□ -1.03
CASC1-208ENST00000555240 FAM163AQ96GL9 167 aaPredicted RBP8.62□□□□□ -1.03
CASC1-208ENST00000555240 KIF12Q96FN5 646 aa8.61□□□□□ -1.03
CASC1-208ENST00000555240 POTEFA5A3E0 1075 aa8.6□□□□□ -1.03
CASC1-208ENST00000555240 MAP3K13O43283 966 aa8.59□□□□□ -1.03
CASC1-208ENST00000555240 TRIM41Q8WV44 630 aa8.59□□□□□ -1.03
CASC1-208ENST00000555240 PCDHB13Q9Y5F0 798 aa8.58□□□□□ -1.04
CASC1-208ENST00000555240 TRPC6Q9Y210 931 aa8.57□□□□□ -1.04
CASC1-208ENST00000555240 SGIP1Q9BQI5 828 aa8.56□□□□□ -1.04
CASC1-208ENST00000555240 SCUBE2Q9NQ36 999 aa8.56□□□□□ -1.04
CASC1-208ENST00000555240 CHRM1P11229 460 aaPredicted RBP8.55□□□□□ -1.04
CASC1-208ENST00000555240 ECM2O94769 699 aaPredicted RBP8.54□□□□□ -1.04
CASC1-208ENST00000555240 BMP2KQ9NSY1 1161 aaPredicted RBP8.54□□□□□ -1.04
CASC1-208ENST00000555240 ZNF467Q7Z7K2 595 aaPredicted RBP8.53□□□□□ -1.04
CASC1-208ENST00000555240 IFNL1Q8IU54 200 aa8.52□□□□□ -1.05
CASC1-208ENST00000555240 PKD2Q13563 968 aa8.51□□□□□ -1.05
CASC1-208ENST00000555240 PCDHB8Q9UN66 801 aa8.5□□□□□ -1.05
CASC1-208ENST00000555240 COLQQ9Y215 455 aaPredicted RBP8.49□□□□□ -1.05
CASC1-208ENST00000555240 AMER1Q5JTC6 1135 aaPredicted RBP8.47□□□□□ -1.05
CASC1-208ENST00000555240 TIE1P35590 1138 aa8.46□□□□□ -1.06
CASC1-208ENST00000555240 RIOK3O14730 519 aaKnown RBP8.45□□□□□ -1.06
CASC1-208ENST00000555240 CDAN1Q8IWY9 1227 aa8.45□□□□□ -1.06
CASC1-208ENST00000555240 PDAP1Q13442 181 aaKnown RBP8.44□□□□□ -1.06
CASC1-208ENST00000555240 TMEM106CQ9BVX2 250 aa8.44□□□□□ -1.06
CASC1-208ENST00000555240 TAOK2Q9UL54 1235 aa8.44□□□□□ -1.06
CASC1-208ENST00000555240 TTLL13PA6NNM8 815 aa8.43□□□□□ -1.06
CASC1-208ENST00000555240 RGL2O15211 777 aa8.42□□□□□ -1.06
CASC1-208ENST00000555240 PSEN1P49768 467 aa8.42□□□□□ -1.06
CASC1-208ENST00000555240 RNF25Q96BH1 459 aaPredicted RBP8.42□□□□□ -1.06
CASC1-208ENST00000555240 SEC24BO95487 1268 aa8.41□□□□□ -1.06
CASC1-208ENST00000555240 VGFO15240 615 aaPredicted RBP8.4□□□□□ -1.06
CASC1-208ENST00000555240 RTN4Q9NQC3 1192 aaKnown RBP8.4□□□□□ -1.06
CASC1-208ENST00000555240 GOLGA2Q08379 1002 aa8.38□□□□□ -1.07
CASC1-208ENST00000555240 TRIM35Q9UPQ4 493 aa8.38□□□□□ -1.07
CASC1-208ENST00000555240 ST18O60284 1047 aa8.37□□□□□ -1.07
CASC1-208ENST00000555240 DCAF8L2P0C7V8 631 aa8.37□□□□□ -1.07
CASC1-208ENST00000555240 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.35□□□□□ -1.07
CASC1-208ENST00000555240 ZFP91Q96JP5 570 aaPredicted RBP8.35□□□□□ -1.07
CASC1-208ENST00000555240 IER5LQ5T953 404 aa8.34□□□□□ -1.07
CASC1-208ENST00000555240 SLAIN1Q8ND83 568 aa8.34□□□□□ -1.07
CASC1-208ENST00000555240 STK25O00506 426 aa8.33□□□□□ -1.08
CASC1-208ENST00000555240 MKRN3Q13064 507 aaKnown RBP8.33□□□□□ -1.08
CASC1-208ENST00000555240 CABP2Q9NPB3 220 aa8.33□□□□□ -1.08
CASC1-208ENST00000555240 BCL11BQ9C0K0 894 aaPredicted RBP8.31□□□□□ -1.08
CASC1-208ENST00000555240 STK24Q9Y6E0 443 aa8.31□□□□□ -1.08
CASC1-208ENST00000555240 CHGAP10645 457 aaKnown RBP8.28□□□□□ -1.08
CASC1-208ENST00000555240 MMRN1Q13201 1228 aa8.27□□□□□ -1.09
CASC1-208ENST00000555240 PLCG2P16885 1265 aa8.26□□□□□ -1.09
CASC1-208ENST00000555240 SPNS2Q8IVW8 549 aa8.26□□□□□ -1.09
CASC1-208ENST00000555240 EFCAB3Q8N7B9 438 aa8.25□□□□□ -1.09
CASC1-208ENST00000555240 IRX5P78411 483 aaPredicted RBP8.24□□□□□ -1.09
CASC1-208ENST00000555240 HS6ST3Q8IZP7 471 aa8.24□□□□□ -1.09
CASC1-208ENST00000555240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.24□□□□□ -1.09
CASC1-208ENST00000555240 OCEL1Q9H607 264 aa8.23□□□□□ -1.09
CASC1-208ENST00000555240 SOX12O15370 315 aa8.21□□□□□ -1.1
CASC1-208ENST00000555240 MARVELD3Q96A59 401 aa8.2□□□□□ -1.1
CASC1-208ENST00000555240 TMEM121BQ9BXQ6 578 aaPredicted RBP8.19□□□□□ -1.1
CASC1-208ENST00000555240 NLRP6P59044 892 aa8.18□□□□□ -1.1
CASC1-208ENST00000555240 PHF8Q9UPP1 1060 aa8.18□□□□□ -1.1
CASC1-208ENST00000555240 G3V3G9 751 aa8.16□□□□□ -1.1
CASC1-208ENST00000555240 PDCD7Q8N8D1 485 aaKnown RBP8.16□□□□□ -1.1
CASC1-208ENST00000555240 L3MBTL3Q96JM7 780 aaPredicted RBP8.14□□□□□ -1.11
CASC1-208ENST00000555240 MFRPQ9BY79 579 aa8.14□□□□□ -1.11
CASC1-208ENST00000555240 SNPHO15079 494 aa8.13□□□□□ -1.11
CASC1-208ENST00000555240 ILDR1Q86SU0 546 aaPredicted RBP8.13□□□□□ -1.11
CASC1-208ENST00000555240 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.13□□□□□ -1.11
CASC1-208ENST00000555240 DPY19L2Q6NUT2 758 aa8.12□□□□□ -1.11
CASC1-208ENST00000555240 DNAJC5Q9H3Z4 198 aa8.12□□□□□ -1.11
CASC1-208ENST00000555240 RYDENQ9NUL5 291 aaKnown RBP8.12□□□□□ -1.11
CASC1-208ENST00000555240 FBXO22Q8NEZ5 403 aa8.11□□□□□ -1.11
CASC1-208ENST00000555240 POTEB3A0JP26 581 aa8.1□□□□□ -1.11
CASC1-208ENST00000555240 NKX1-1Q15270 411 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms