RNA–Protein interactions for RNA: ENST00000554902.5

PNN-204, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-204ENST00000554902 RASEFQ8IZ41 740 aa12.5□□□□□ -0.41
PNN-204ENST00000554902 CCDC61Q9Y6R9 512 aa12.47□□□□□ -0.41
PNN-204ENST00000554902 NUBP1P53384 320 aa12.44□□□□□ -0.42
PNN-204ENST00000554902 MS4A3Q96HJ5 214 aa12.41□□□□□ -0.42
PNN-204ENST00000554902 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
PNN-204ENST00000554902 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
PNN-204ENST00000554902 IFNLR1Q8IU57 520 aaPredicted RBP12.36□□□□□ -0.43
PNN-204ENST00000554902 FAM212AQ96EL1 285 aa12.36□□□□□ -0.43
PNN-204ENST00000554902 MAP3K13O43283 966 aa12.34□□□□□ -0.43
PNN-204ENST00000554902 LHX8Q68G74 356 aa12.33□□□□□ -0.44
PNN-204ENST00000554902 DCAF8Q5TAQ9 597 aa12.31□□□□□ -0.44
PNN-204ENST00000554902 ASTLQ6HA08 431 aaPredicted RBP12.27□□□□□ -0.45
PNN-204ENST00000554902 ATMINO43313 823 aaPredicted RBP12.26□□□□□ -0.45
PNN-204ENST00000554902 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
PNN-204ENST00000554902 SGIP1Q9BQI5 828 aa12.25□□□□□ -0.45
PNN-204ENST00000554902 PCDHB13Q9Y5F0 798 aa12.25□□□□□ -0.45
PNN-204ENST00000554902 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
PNN-204ENST00000554902 PYGBP11216 843 aa12.2□□□□□ -0.46
PNN-204ENST00000554902 GSE1Q14687 1217 aa12.2□□□□□ -0.46
PNN-204ENST00000554902 BMP2KQ9NSY1 1161 aaPredicted RBP12.2□□□□□ -0.46
PNN-204ENST00000554902 TIE1P35590 1138 aa12.19□□□□□ -0.46
PNN-204ENST00000554902 ATN1P54259 1190 aaPredicted RBP12.19□□□□□ -0.46
PNN-204ENST00000554902 IFNL1Q8IU54 200 aa12.18□□□□□ -0.46
PNN-204ENST00000554902 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
PNN-204ENST00000554902 SLC39A7Q92504 469 aa12.17□□□□□ -0.46
PNN-204ENST00000554902 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
PNN-204ENST00000554902 C7P10643 843 aa12.15□□□□□ -0.46
PNN-204ENST00000554902 AMER1Q5JTC6 1135 aaPredicted RBP12.15□□□□□ -0.46
PNN-204ENST00000554902 METRNQ9UJH8 293 aa12.15□□□□□ -0.46
PNN-204ENST00000554902 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
PNN-204ENST00000554902 POTEB2H3BUK9 544 aa12.1□□□□□ -0.47
PNN-204ENST00000554902 CIZ1Q9ULV3 898 aaPredicted RBP12.1□□□□□ -0.47
PNN-204ENST00000554902 TMEM106CQ9BVX2 250 aa12.07□□□□□ -0.48
PNN-204ENST00000554902 PCDHB8Q9UN66 801 aa12.07□□□□□ -0.48
PNN-204ENST00000554902 CHRM1P11229 460 aaPredicted RBP12.06□□□□□ -0.48
PNN-204ENST00000554902 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
PNN-204ENST00000554902 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
PNN-204ENST00000554902 OTUD5Q96G74 571 aa12□□□□□ -0.49
PNN-204ENST00000554902 POTEFA5A3E0 1075 aa11.99□□□□□ -0.49
PNN-204ENST00000554902 SEC24BO95487 1268 aa11.99□□□□□ -0.49
PNN-204ENST00000554902 IER5LQ5T953 404 aa11.99□□□□□ -0.49
PNN-204ENST00000554902 PKD2Q13563 968 aa11.98□□□□□ -0.49
PNN-204ENST00000554902 COLQQ9Y215 455 aaPredicted RBP11.96□□□□□ -0.49
PNN-204ENST00000554902 POTEJP0CG39 1038 aa11.95□□□□□ -0.5
PNN-204ENST00000554902 MAMSTRQ6ZN01 415 aa11.93□□□□□ -0.5
PNN-204ENST00000554902 PSEN1P49768 467 aa11.92□□□□□ -0.5
PNN-204ENST00000554902 TRIM41Q8WV44 630 aa11.91□□□□□ -0.5
PNN-204ENST00000554902 ECM2O94769 699 aaPredicted RBP11.89□□□□□ -0.51
PNN-204ENST00000554902 PLCG2P16885 1265 aa11.88□□□□□ -0.51
PNN-204ENST00000554902 PDAP1Q13442 181 aaKnown RBP11.88□□□□□ -0.51
PNN-204ENST00000554902 IRX5P78411 483 aaPredicted RBP11.87□□□□□ -0.51
PNN-204ENST00000554902 GOLGA2Q08379 1002 aa11.87□□□□□ -0.51
PNN-204ENST00000554902 SCUBE2Q9NQ36 999 aa11.87□□□□□ -0.51
PNN-204ENST00000554902 OCEL1Q9H607 264 aa11.84□□□□□ -0.51
PNN-204ENST00000554902 MKRN3Q13064 507 aaKnown RBP11.83□□□□□ -0.52
PNN-204ENST00000554902 RGL2O15211 777 aa11.79□□□□□ -0.52
PNN-204ENST00000554902 CABP2Q9NPB3 220 aa11.77□□□□□ -0.53
PNN-204ENST00000554902 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
PNN-204ENST00000554902 DCAF8L2P0C7V8 631 aa11.75□□□□□ -0.53
PNN-204ENST00000554902 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.75□□□□□ -0.531e-17■■■■■ 35.8
PNN-204ENST00000554902 RNF25Q96BH1 459 aaPredicted RBP11.74□□□□□ -0.53
PNN-204ENST00000554902 PDCD7Q8N8D1 485 aaKnown RBP11.73□□□□□ -0.53
PNN-204ENST00000554902 VGFO15240 615 aaPredicted RBP11.69□□□□□ -0.54
PNN-204ENST00000554902 SLAIN1Q8ND83 568 aa11.68□□□□□ -0.54
PNN-204ENST00000554902 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.67□□□□□ -0.54
PNN-204ENST00000554902 ILDR1Q86SU0 546 aaPredicted RBP11.67□□□□□ -0.54
PNN-204ENST00000554902 L3MBTL3Q96JM7 780 aaPredicted RBP11.67□□□□□ -0.54
PNN-204ENST00000554902 ZFP91Q96JP5 570 aaPredicted RBP11.67□□□□□ -0.54
PNN-204ENST00000554902 EFCAB3Q8N7B9 438 aa11.65□□□□□ -0.54
PNN-204ENST00000554902 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
PNN-204ENST00000554902 FAM163AQ96GL9 167 aaPredicted RBP11.64□□□□□ -0.55
PNN-204ENST00000554902 TAOK2Q9UL54 1235 aa11.64□□□□□ -0.55
PNN-204ENST00000554902 DPY19L2Q6NUT2 758 aa11.63□□□□□ -0.55
PNN-204ENST00000554902 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
PNN-204ENST00000554902 POTEMA6NI47 508 aa11.58□□□□□ -0.56
PNN-204ENST00000554902 G3V3G9 751 aa11.58□□□□□ -0.56
PNN-204ENST00000554902 PLSCR2Q9NRY7 297 aa11.58□□□□□ -0.56
PNN-204ENST00000554902 SOX12O15370 315 aa11.57□□□□□ -0.56
PNN-204ENST00000554902 CHGAP10645 457 aaKnown RBP11.56□□□□□ -0.56
PNN-204ENST00000554902 LCE2DQ5TA82 110 aaPredicted RBP11.56□□□□□ -0.56
PNN-204ENST00000554902 POTEGQ6S5H5 508 aa11.56□□□□□ -0.56
PNN-204ENST00000554902 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
PNN-204ENST00000554902 BOLA1Q9Y3E2 137 aa11.56□□□□□ -0.56
PNN-204ENST00000554902 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
PNN-204ENST00000554902 STK25O00506 426 aa11.52□□□□□ -0.57
PNN-204ENST00000554902 PHF8Q9UPP1 1060 aa11.51□□□□□ -0.57
PNN-204ENST00000554902 HS6ST3Q8IZP7 471 aa11.5□□□□□ -0.57
PNN-204ENST00000554902 SNPHO15079 494 aa11.49□□□□□ -0.57
PNN-204ENST00000554902 ST18O60284 1047 aa11.47□□□□□ -0.57
PNN-204ENST00000554902 MS4A4AQ96JQ5 239 aa11.47□□□□□ -0.57
PNN-204ENST00000554902 TMEM121BQ9BXQ6 578 aaPredicted RBP11.47□□□□□ -0.57
PNN-204ENST00000554902 NLRP6P59044 892 aa11.46□□□□□ -0.57
PNN-204ENST00000554902 MICALL2Q8IY33 904 aa11.42□□□□□ -0.58
PNN-204ENST00000554902 FBXO22Q8NEZ5 403 aa11.42□□□□□ -0.58
PNN-204ENST00000554902 BBXQ8WY36 941 aaPredicted RBP11.42□□□□□ -0.58
PNN-204ENST00000554902 MFRPQ9BY79 579 aa11.41□□□□□ -0.58
PNN-204ENST00000554902 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
PNN-204ENST00000554902 NKX1-1Q15270 411 aaPredicted RBP11.37□□□□□ -0.59
PNN-204ENST00000554902 DNAJC5Q9H3Z4 198 aa11.37□□□□□ -0.59
PNN-204ENST00000554902 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms