RNA–Protein interactions for RNA: ENST00000554890.1

KTN1-218, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-218ENST00000554890 ASTLQ6HA08 431 aaPredicted RBP11.97□□□□□ -0.49
KTN1-218ENST00000554890 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
KTN1-218ENST00000554890 ATMINO43313 823 aaPredicted RBP11.95□□□□□ -0.5
KTN1-218ENST00000554890 SLC39A7Q92504 469 aa11.92□□□□□ -0.5
KTN1-218ENST00000554890 C7P10643 843 aa11.91□□□□□ -0.5
KTN1-218ENST00000554890 TSPYL2Q9H2G4 693 aaPredicted RBP11.88□□□□□ -0.51
KTN1-218ENST00000554890 ATN1P54259 1190 aaPredicted RBP11.83□□□□□ -0.52
KTN1-218ENST00000554890 LCE2DQ5TA82 110 aaPredicted RBP11.83□□□□□ -0.52
KTN1-218ENST00000554890 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
KTN1-218ENST00000554890 PCDH10Q9P2E7 1040 aa11.81□□□□□ -0.52
KTN1-218ENST00000554890 FAM163AQ96GL9 167 aaPredicted RBP11.8□□□□□ -0.52
KTN1-218ENST00000554890 CCDC61Q9Y6R9 512 aa11.8□□□□□ -0.52
KTN1-218ENST00000554890 SCUBE2Q9NQ36 999 aa11.78□□□□□ -0.52
KTN1-218ENST00000554890 KIF12Q96FN5 646 aa11.76□□□□□ -0.53
KTN1-218ENST00000554890 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
KTN1-218ENST00000554890 POTEFA5A3E0 1075 aa11.75□□□□□ -0.53
KTN1-218ENST00000554890 BMP2KQ9NSY1 1161 aaPredicted RBP11.75□□□□□ -0.53
KTN1-218ENST00000554890 PROM2Q8N271 834 aa11.7□□□□□ -0.54
KTN1-218ENST00000554890 MAP3K13O43283 966 aa11.69□□□□□ -0.54
KTN1-218ENST00000554890 TIE1P35590 1138 aa11.64□□□□□ -0.55
KTN1-218ENST00000554890 RASEFQ8IZ41 740 aa11.64□□□□□ -0.55
KTN1-218ENST00000554890 COLQQ9Y215 455 aaPredicted RBP11.64□□□□□ -0.55
KTN1-218ENST00000554890 TTLL13PA6NNM8 815 aa11.61□□□□□ -0.55
KTN1-218ENST00000554890 SEC24BO95487 1268 aa11.61□□□□□ -0.55
KTN1-218ENST00000554890 MIER1Q8N108 512 aa11.59□□□□□ -0.55
KTN1-218ENST00000554890 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
KTN1-218ENST00000554890 CDAN1Q8IWY9 1227 aa11.54□□□□□ -0.56
KTN1-218ENST00000554890 TRIM35Q9UPQ4 493 aa11.54□□□□□ -0.56
KTN1-218ENST00000554890 PCDHB13Q9Y5F0 798 aa11.5□□□□□ -0.57
KTN1-218ENST00000554890 IER5LQ5T953 404 aa11.49□□□□□ -0.57
KTN1-218ENST00000554890 SLAIN1Q8ND83 568 aa11.47□□□□□ -0.57
KTN1-218ENST00000554890 ST18O60284 1047 aa11.45□□□□□ -0.58
KTN1-218ENST00000554890 PLCD3Q8N3E9 789 aa11.45□□□□□ -0.58
KTN1-218ENST00000554890 SGIP1Q9BQI5 828 aa11.44□□□□□ -0.58
KTN1-218ENST00000554890 IFNL1Q8IU54 200 aa11.43□□□□□ -0.58
KTN1-218ENST00000554890 NUBP1P53384 320 aa11.41□□□□□ -0.58
KTN1-218ENST00000554890 TMEM106CQ9BVX2 250 aa11.41□□□□□ -0.58
KTN1-218ENST00000554890 PLCG2P16885 1265 aa11.38□□□□□ -0.59
KTN1-218ENST00000554890 IRX5P78411 483 aaPredicted RBP11.34□□□□□ -0.59
KTN1-218ENST00000554890 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
KTN1-218ENST00000554890 FAM212AQ96EL1 285 aa11.32□□□□□ -0.6
KTN1-218ENST00000554890 MMRN1Q13201 1228 aa11.29□□□□□ -0.6
KTN1-218ENST00000554890 SPNS2Q8IVW8 549 aa11.27□□□□□ -0.61
KTN1-218ENST00000554890 OCEL1Q9H607 264 aa11.26□□□□□ -0.61
KTN1-218ENST00000554890 MARVELD3Q96A59 401 aa11.25□□□□□ -0.61
KTN1-218ENST00000554890 TMEM121BQ9BXQ6 578 aaPredicted RBP11.25□□□□□ -0.61
KTN1-218ENST00000554890 PYGBP11216 843 aa11.23□□□□□ -0.61
KTN1-218ENST00000554890 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.22□□□□□ -0.61
KTN1-218ENST00000554890 PCDHB8Q9UN66 801 aa11.2□□□□□ -0.62
KTN1-218ENST00000554890 SNPHO15079 494 aa11.19□□□□□ -0.62
KTN1-218ENST00000554890 DCAF8Q5TAQ9 597 aa11.18□□□□□ -0.62
KTN1-218ENST00000554890 PDCD7Q8N8D1 485 aaKnown RBP11.11□□□□□ -0.63
KTN1-218ENST00000554890 EMP3P54852 163 aa11.1□□□□□ -0.63
KTN1-218ENST00000554890 C3orf67Q6ZVT6 689 aa11.1□□□□□ -0.63
KTN1-218ENST00000554890 FKBP8Q14318 412 aa11.07□□□□□ -0.64
KTN1-218ENST00000554890 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
KTN1-218ENST00000554890 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
KTN1-218ENST00000554890 KRTAP3-3Q9BYR6 98 aa11.05□□□□□ -0.64
KTN1-218ENST00000554890 KRTAP3-2Q9BYR7 98 aa11.05□□□□□ -0.64
KTN1-218ENST00000554890 FAM205CA6NFA0 338 aa11.03□□□□□ -0.64
KTN1-218ENST00000554890 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
KTN1-218ENST00000554890 MKRN3Q13064 507 aaKnown RBP11.03□□□□□ -0.64
KTN1-218ENST00000554890 HS3ST6Q96QI5 342 aa11.03□□□□□ -0.64
KTN1-218ENST00000554890 L3MBTL3Q96JM7 780 aaPredicted RBP11.02□□□□□ -0.65
KTN1-218ENST00000554890 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11□□□□□ -0.658e-14■■■■□ 25.6
KTN1-218ENST00000554890 ZNF467Q7Z7K2 595 aaPredicted RBP10.99□□□□□ -0.65
KTN1-218ENST00000554890 PSEN1P49768 467 aa10.94□□□□□ -0.66
KTN1-218ENST00000554890 GSE1Q14687 1217 aa10.93□□□□□ -0.66
KTN1-218ENST00000554890 DPY19L2Q6NUT2 758 aa10.93□□□□□ -0.66
KTN1-218ENST00000554890 KLHL34Q8N239 644 aa10.92□□□□□ -0.66
KTN1-218ENST00000554890 FBXO3Q9UK99 471 aa10.9□□□□□ -0.66
KTN1-218ENST00000554890 CHRM1P11229 460 aaPredicted RBP10.88□□□□□ -0.67
KTN1-218ENST00000554890 ILDR1Q86SU0 546 aaPredicted RBP10.88□□□□□ -0.67
KTN1-218ENST00000554890 HOXB3P14651 431 aaPredicted RBP10.87□□□□□ -0.67
KTN1-218ENST00000554890 VASPP50552 380 aaPredicted RBP10.84□□□□□ -0.67
KTN1-218ENST00000554890 CABP2Q9NPB3 220 aa10.84□□□□□ -0.67
KTN1-218ENST00000554890 BOLA1Q9Y3E2 137 aa10.84□□□□□ -0.67
KTN1-218ENST00000554890 PDAP1Q13442 181 aaKnown RBP10.83□□□□□ -0.68
KTN1-218ENST00000554890 G3V3G9 751 aa10.82□□□□□ -0.68
KTN1-218ENST00000554890 ZNF710Q8N1W2 664 aa10.81□□□□□ -0.68
KTN1-218ENST00000554890 HOXB1P14653 301 aaPredicted RBP10.8□□□□□ -0.68
KTN1-218ENST00000554890 ERBB3P21860 1342 aa10.8□□□□□ -0.68
KTN1-218ENST00000554890 DOK7Q18PE1 504 aa10.76□□□□□ -0.69
KTN1-218ENST00000554890 RNF166Q96A37 237 aaPredicted RBP10.76□□□□□ -0.69
KTN1-218ENST00000554890 VARS2Q5ST30 1063 aaKnown RBP10.74□□□□□ -0.69
KTN1-218ENST00000554890 CIZ1Q9ULV3 898 aaPredicted RBP10.72□□□□□ -0.69
KTN1-218ENST00000554890 MYT1LQ9UL68 1186 aa10.69□□□□□ -0.7
KTN1-218ENST00000554890 RIMBP2O15034 1052 aa10.68□□□□□ -0.7
KTN1-218ENST00000554890 EFCAB3Q8N7B9 438 aa10.66□□□□□ -0.7
KTN1-218ENST00000554890 TMEM92Q6UXU6 159 aa10.65□□□□□ -0.7
KTN1-218ENST00000554890 SPOCK2Q92563 424 aa10.65□□□□□ -0.7
KTN1-218ENST00000554890 IFNLR1Q8IU57 520 aaPredicted RBP10.63□□□□□ -0.71
KTN1-218ENST00000554890 ZNF687Q8N1G0 1237 aa10.62□□□□□ -0.71
KTN1-218ENST00000554890 MICALL2Q8IY33 904 aa10.61□□□□□ -0.71
KTN1-218ENST00000554890 GPR153Q6NV75 609 aa10.59□□□□□ -0.71
KTN1-218ENST00000554890 ZSWIM6Q9HCJ5 1215 aa10.58□□□□□ -0.72
KTN1-218ENST00000554890 ANKRD13DQ6ZTN6 518 aa10.54□□□□□ -0.72
KTN1-218ENST00000554890 ARSIQ5FYB1 569 aa10.53□□□□□ -0.72
KTN1-218ENST00000554890 PTGER2P43116 358 aa10.52□□□□□ -0.73
KTN1-218ENST00000554890 MS4A4AQ96JQ5 239 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms