RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 GSE1Q14687 1217 aa9.35□□□□□ -0.91
PPP4R3A-204ENST00000554574 SPDYE1Q8NFV5 336 aaPredicted RBP9.31□□□□□ -0.92
PPP4R3A-204ENST00000554574 TPRNQ4KMQ1 711 aa9.3□□□□□ -0.92
PPP4R3A-204ENST00000554574 DCAF8Q5TAQ9 597 aa9.29□□□□□ -0.92
PPP4R3A-204ENST00000554574 DNAJC5Q9H3Z4 198 aa9.29□□□□□ -0.92
PPP4R3A-204ENST00000554574 CREBZFQ9NS37 354 aa9.29□□□□□ -0.92
PPP4R3A-204ENST00000554574 RIOK3O14730 519 aaKnown RBP9.27□□□□□ -0.93
PPP4R3A-204ENST00000554574 NKX1-1Q15270 411 aaPredicted RBP9.27□□□□□ -0.93
PPP4R3A-204ENST00000554574 AKT1S1Q96B36 256 aa9.27□□□□□ -0.93
PPP4R3A-204ENST00000554574 MNX1P50219 401 aaPredicted RBP9.27□□□□□ -0.93
PPP4R3A-204ENST00000554574 CLEC11AQ9Y240 323 aa9.27□□□□□ -0.93
PPP4R3A-204ENST00000554574 RBM42Q9BTD8 480 aaKnown RBP9.25□□□□□ -0.93
PPP4R3A-204ENST00000554574 PRR29P0C7W0 189 aa9.24□□□□□ -0.93
PPP4R3A-204ENST00000554574 FAM212AQ96EL1 285 aa9.24□□□□□ -0.93
PPP4R3A-204ENST00000554574 REM2Q8IYK8 340 aaPredicted RBP9.21□□□□□ -0.93
PPP4R3A-204ENST00000554574 RASEFQ8IZ41 740 aa9.21□□□□□ -0.93
PPP4R3A-204ENST00000554574 GTPBP6O43824 516 aaPredicted RBP9.21□□□□□ -0.94
PPP4R3A-204ENST00000554574 STK25O00506 426 aa9.2□□□□□ -0.94
PPP4R3A-204ENST00000554574 VGFO15240 615 aaPredicted RBP9.19□□□□□ -0.94
PPP4R3A-204ENST00000554574 CHRM1P11229 460 aaPredicted RBP9.18□□□□□ -0.94
PPP4R3A-204ENST00000554574 NBR1Q14596 966 aa9.16□□□□□ -0.94
PPP4R3A-204ENST00000554574 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.14□□□□□ -0.95
PPP4R3A-204ENST00000554574 ZFP91Q96JP5 570 aaPredicted RBP9.14□□□□□ -0.95
PPP4R3A-204ENST00000554574 PYGBP11216 843 aa9.13□□□□□ -0.95
PPP4R3A-204ENST00000554574 BCL11BQ9C0K0 894 aaPredicted RBP9.13□□□□□ -0.95
PPP4R3A-204ENST00000554574 SGIP1Q9BQI5 828 aa9.13□□□□□ -0.95
PPP4R3A-204ENST00000554574 PITPNM1O00562 1244 aa9.12□□□□□ -0.95
PPP4R3A-204ENST00000554574 STK24Q9Y6E0 443 aa9.12□□□□□ -0.95
PPP4R3A-204ENST00000554574 RYDENQ9NUL5 291 aaKnown RBP9.03□□□□□ -0.96
PPP4R3A-204ENST00000554574 CHADLQ6NUI6 762 aa9.03□□□□□ -0.96
PPP4R3A-204ENST00000554574 CCDC180Q9P1Z9 1646 aa9.03□□□□□ -0.96
PPP4R3A-204ENST00000554574 TSPYL2Q9H2G4 693 aaPredicted RBP9.01□□□□□ -0.97
PPP4R3A-204ENST00000554574 ZNF467Q7Z7K2 595 aaPredicted RBP8.97□□□□□ -0.97
PPP4R3A-204ENST00000554574 CADPS2Q86UW7 1296 aa8.95□□□□□ -0.98
PPP4R3A-204ENST00000554574 PCDHB8Q9UN66 801 aa8.95□□□□□ -0.98
PPP4R3A-204ENST00000554574 FARP1Q9Y4F1 1045 aaPredicted RBP8.95□□□□□ -0.98
PPP4R3A-204ENST00000554574 PCDHB13Q9Y5F0 798 aa8.95□□□□□ -0.98
PPP4R3A-204ENST00000554574 PDAP1Q13442 181 aaKnown RBP8.94□□□□□ -0.98
PPP4R3A-204ENST00000554574 CCDC61Q9Y6R9 512 aa8.92□□□□□ -0.98
PPP4R3A-204ENST00000554574 P3H3Q8IVL6 736 aa8.91□□□□□ -0.98
PPP4R3A-204ENST00000554574 MFRPQ9BY79 579 aa8.9□□□□□ -0.98
PPP4R3A-204ENST00000554574 CHRDL2Q6WN34 429 aa8.9□□□□□ -0.99
PPP4R3A-204ENST00000554574 KCNV2Q8TDN2 545 aa8.9□□□□□ -0.99
PPP4R3A-204ENST00000554574 PSEN1P49768 467 aa8.89□□□□□ -0.99
PPP4R3A-204ENST00000554574 ZNF579Q8NAF0 562 aaKnown RBP8.88□□□□□ -0.99
PPP4R3A-204ENST00000554574 PRKAR2AP13861 404 aaKnown RBP8.88□□□□□ -0.99
PPP4R3A-204ENST00000554574 SP7Q8TDD2 431 aaPredicted RBP8.88□□□□□ -0.99
PPP4R3A-204ENST00000554574 WDR70Q9NW82 654 aa8.86□□□□□ -0.99
PPP4R3A-204ENST00000554574 IFNL1Q8IU54 200 aa8.84□□□□□ -1
PPP4R3A-204ENST00000554574 PPP1R37O75864 691 aa8.82□□□□□ -1
PPP4R3A-204ENST00000554574 FXR2P51116 673 aaKnown RBP eCLIP8.82□□□□□ -1
PPP4R3A-204ENST00000554574 EFCAB3Q8N7B9 438 aa8.81□□□□□ -1
PPP4R3A-204ENST00000554574 FBXO22Q8NEZ5 403 aa8.81□□□□□ -1
PPP4R3A-204ENST00000554574 MAP3K13O43283 966 aa8.8□□□□□ -1
PPP4R3A-204ENST00000554574 LMOD2Q6P5Q4 547 aa8.79□□□□□ -1
PPP4R3A-204ENST00000554574 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.79□□□□□ -1
PPP4R3A-204ENST00000554574 KIF12Q96FN5 646 aa8.79□□□□□ -1
PPP4R3A-204ENST00000554574 CABP2Q9NPB3 220 aa8.79□□□□□ -1
PPP4R3A-204ENST00000554574 PHF8Q9UPP1 1060 aa8.78□□□□□ -1
PPP4R3A-204ENST00000554574 PAK3O75914 559 aaPredicted RBP8.78□□□□□ -1
PPP4R3A-204ENST00000554574 NLRP6P59044 892 aa8.76□□□□□ -1.01
PPP4R3A-204ENST00000554574 SOX12O15370 315 aa8.75□□□□□ -1.01
PPP4R3A-204ENST00000554574 PIP4P2Q8N4L2 257 aa8.73□□□□□ -1.01
PPP4R3A-204ENST00000554574 ARHGEF1Q92888 912 aaKnown RBP8.73□□□□□ -1.01
PPP4R3A-204ENST00000554574 TIMELESSQ9UNS1 1208 aa8.73□□□□□ -1.01
PPP4R3A-204ENST00000554574 E2F4Q16254 413 aa8.72□□□□□ -1.01
PPP4R3A-204ENST00000554574 GTF3C3Q9Y5Q9 886 aa8.72□□□□□ -1.01
PPP4R3A-204ENST00000554574 TULP1O00294 542 aaPredicted RBP8.71□□□□□ -1.02
PPP4R3A-204ENST00000554574 NCKAP5LQ9HCH0 1330 aa8.71□□□□□ -1.02
PPP4R3A-204ENST00000554574 MS4A4AQ96JQ5 239 aa8.7□□□□□ -1.02
PPP4R3A-204ENST00000554574 TMEM132AQ24JP5 1023 aa8.69□□□□□ -1.02
PPP4R3A-204ENST00000554574 SEMA3EO15041 775 aa8.68□□□□□ -1.02
PPP4R3A-204ENST00000554574 PHF12Q96QT6 1004 aa8.68□□□□□ -1.02
PPP4R3A-204ENST00000554574 ZRANB1Q9UGI0 708 aa8.68□□□□□ -1.02
PPP4R3A-204ENST00000554574 ZCCHC6Q5VYS8 1495 aaKnown RBP8.68□□□□□ -1.02
PPP4R3A-204ENST00000554574 TESPA1A2RU30 521 aaPredicted RBP8.67□□□□□ -1.02
PPP4R3A-204ENST00000554574 CD44P16070 742 aaKnown RBP8.66□□□□□ -1.02
PPP4R3A-204ENST00000554574 ZC3H15Q8WU90 426 aaKnown RBP8.66□□□□□ -1.02
PPP4R3A-204ENST00000554574 LARP6Q9BRS8 491 aaKnown RBP8.66□□□□□ -1.02
PPP4R3A-204ENST00000554574 MFSD10Q14728 455 aa8.64□□□□□ -1.03
PPP4R3A-204ENST00000554574 CRISPLD2Q9H0B8 497 aa8.64□□□□□ -1.03
PPP4R3A-204ENST00000554574 BRPF1P55201 1214 aaPredicted RBP8.63□□□□□ -1.03
PPP4R3A-204ENST00000554574 TRPC6Q9Y210 931 aa8.63□□□□□ -1.03
PPP4R3A-204ENST00000554574 PDE4AP27815 886 aa8.62□□□□□ -1.03
PPP4R3A-204ENST00000554574 TMEM106CQ9BVX2 250 aa8.62□□□□□ -1.03
PPP4R3A-204ENST00000554574 GOLGA2Q08379 1002 aa8.6□□□□□ -1.03
PPP4R3A-204ENST00000554574 DDX27Q96GQ7 796 aaKnown RBP8.6□□□□□ -1.03
PPP4R3A-204ENST00000554574 MS4A3Q96HJ5 214 aa8.59□□□□□ -1.03
PPP4R3A-204ENST00000554574 HAX1O00165 279 aa8.58□□□□□ -1.04
PPP4R3A-204ENST00000554574 SLC24A3Q9HC58 644 aa8.58□□□□□ -1.04
PPP4R3A-204ENST00000554574 ARIH1Q9Y4X5 557 aaPredicted RBP8.58□□□□□ -1.04
PPP4R3A-204ENST00000554574 CAMK2BQ13554 666 aa8.57□□□□□ -1.04
PPP4R3A-204ENST00000554574 MKRN3Q13064 507 aaKnown RBP8.56□□□□□ -1.04
PPP4R3A-204ENST00000554574 DCAF1Q9Y4B6 1507 aa8.56□□□□□ -1.04
PPP4R3A-204ENST00000554574 NEUROD2Q15784 382 aa8.54□□□□□ -1.04
PPP4R3A-204ENST00000554574 PLSCR2Q9NRY7 297 aa8.54□□□□□ -1.04
PPP4R3A-204ENST00000554574 ZMYND10O75800 440 aa8.54□□□□□ -1.04
PPP4R3A-204ENST00000554574 SMYD5Q6GMV2 418 aa8.53□□□□□ -1.04
PPP4R3A-204ENST00000554574 ILDR1Q86SU0 546 aaPredicted RBP8.52□□□□□ -1.05
PPP4R3A-204ENST00000554574 TTLL13PA6NNM8 815 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms