RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 MS4A3Q96HJ5 214 aa11.7□□□□□ -0.54
ATXN3-227ENST00000554491 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.54
ATXN3-227ENST00000554491 KIF12Q96FN5 646 aa11.64□□□□□ -0.55
ATXN3-227ENST00000554491 NUBP1P53384 320 aa11.61□□□□□ -0.55
ATXN3-227ENST00000554491 MAP3K13O43283 966 aa11.59□□□□□ -0.55
ATXN3-227ENST00000554491 ATMINO43313 823 aaPredicted RBP11.58□□□□□ -0.56
ATXN3-227ENST00000554491 ASTLQ6HA08 431 aaPredicted RBP11.58□□□□□ -0.56
ATXN3-227ENST00000554491 ZBTB47Q9UFB7 747 aaPredicted RBP11.58□□□□□ -0.56
ATXN3-227ENST00000554491 POTEB2H3BUK9 544 aa11.56□□□□□ -0.56
ATXN3-227ENST00000554491 FBXO3Q9UK99 471 aa11.56□□□□□ -0.56
ATXN3-227ENST00000554491 TRPC6Q9Y210 931 aa11.56□□□□□ -0.56
ATXN3-227ENST00000554491 ATN1P54259 1190 aaPredicted RBP11.51□□□□□ -0.57
ATXN3-227ENST00000554491 BMP2KQ9NSY1 1161 aaPredicted RBP11.5□□□□□ -0.57
ATXN3-227ENST00000554491 METRNQ9UJH8 293 aa11.5□□□□□ -0.57
ATXN3-227ENST00000554491 FAM212AQ96EL1 285 aa11.48□□□□□ -0.57
ATXN3-227ENST00000554491 VASPP50552 380 aaPredicted RBP11.47□□□□□ -0.57
ATXN3-227ENST00000554491 C7P10643 843 aa11.46□□□□□ -0.57
ATXN3-227ENST00000554491 SLC39A7Q92504 469 aa11.46□□□□□ -0.57
ATXN3-227ENST00000554491 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
ATXN3-227ENST00000554491 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
ATXN3-227ENST00000554491 TIE1P35590 1138 aa11.43□□□□□ -0.58
ATXN3-227ENST00000554491 IFNL1Q8IU54 200 aa11.42□□□□□ -0.58
ATXN3-227ENST00000554491 TTLL13PA6NNM8 815 aa11.41□□□□□ -0.58
ATXN3-227ENST00000554491 POTEJP0CG39 1038 aa11.41□□□□□ -0.58
ATXN3-227ENST00000554491 DCAF8Q5TAQ9 597 aa11.41□□□□□ -0.58
ATXN3-227ENST00000554491 SGIP1Q9BQI5 828 aa11.41□□□□□ -0.58
ATXN3-227ENST00000554491 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
ATXN3-227ENST00000554491 PYGBP11216 843 aa11.38□□□□□ -0.59
ATXN3-227ENST00000554491 POTEFA5A3E0 1075 aa11.37□□□□□ -0.59
ATXN3-227ENST00000554491 TRIM35Q9UPQ4 493 aa11.33□□□□□ -0.6
ATXN3-227ENST00000554491 COLQQ9Y215 455 aaPredicted RBP11.33□□□□□ -0.6
ATXN3-227ENST00000554491 TMEM106CQ9BVX2 250 aa11.32□□□□□ -0.6
ATXN3-227ENST00000554491 IFNLR1Q8IU57 520 aaPredicted RBP11.3□□□□□ -0.6
ATXN3-227ENST00000554491 PCDHB8Q9UN66 801 aa11.3□□□□□ -0.6
ATXN3-227ENST00000554491 SEC24BO95487 1268 aa11.27□□□□□ -0.61
ATXN3-227ENST00000554491 GSE1Q14687 1217 aa11.25□□□□□ -0.61
ATXN3-227ENST00000554491 IER5LQ5T953 404 aa11.24□□□□□ -0.61
ATXN3-227ENST00000554491 MAMSTRQ6ZN01 415 aa11.24□□□□□ -0.61
ATXN3-227ENST00000554491 SPOCK2Q92563 424 aa11.22□□□□□ -0.61
ATXN3-227ENST00000554491 SCUBE2Q9NQ36 999 aa11.21□□□□□ -0.61
ATXN3-227ENST00000554491 CHRM1P11229 460 aaPredicted RBP11.18□□□□□ -0.62
ATXN3-227ENST00000554491 IRX5P78411 483 aaPredicted RBP11.16□□□□□ -0.62
ATXN3-227ENST00000554491 ZNF467Q7Z7K2 595 aaPredicted RBP11.16□□□□□ -0.62
ATXN3-227ENST00000554491 CIZ1Q9ULV3 898 aaPredicted RBP11.16□□□□□ -0.62
ATXN3-227ENST00000554491 PLCG2P16885 1265 aa11.14□□□□□ -0.63
ATXN3-227ENST00000554491 POTEMA6NI47 508 aa11.09□□□□□ -0.63
ATXN3-227ENST00000554491 PSEN1P49768 467 aa11.09□□□□□ -0.63
ATXN3-227ENST00000554491 LCE2DQ5TA82 110 aaPredicted RBP11.09□□□□□ -0.63
ATXN3-227ENST00000554491 OCEL1Q9H607 264 aa11.09□□□□□ -0.63
ATXN3-227ENST00000554491 FAM163AQ96GL9 167 aaPredicted RBP11.08□□□□□ -0.64
ATXN3-227ENST00000554491 POTEGQ6S5H5 508 aa11.07□□□□□ -0.64
ATXN3-227ENST00000554491 PDAP1Q13442 181 aaKnown RBP11.03□□□□□ -0.64
ATXN3-227ENST00000554491 PDCD7Q8N8D1 485 aaKnown RBP11.03□□□□□ -0.64
ATXN3-227ENST00000554491 SLAIN1Q8ND83 568 aa11.03□□□□□ -0.64
ATXN3-227ENST00000554491 GOLGA2Q08379 1002 aa11.02□□□□□ -0.65
ATXN3-227ENST00000554491 MKRN3Q13064 507 aaKnown RBP11.01□□□□□ -0.65
ATXN3-227ENST00000554491 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.98□□□□□ -0.653e-6■■□□□ 13.5
ATXN3-227ENST00000554491 CABP2Q9NPB3 220 aa10.97□□□□□ -0.65
ATXN3-227ENST00000554491 PLSCR2Q9NRY7 297 aa10.97□□□□□ -0.65
ATXN3-227ENST00000554491 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
ATXN3-227ENST00000554491 DPY19L2Q6NUT2 758 aa10.92□□□□□ -0.66
ATXN3-227ENST00000554491 ILDR1Q86SU0 546 aaPredicted RBP10.92□□□□□ -0.66
ATXN3-227ENST00000554491 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.92□□□□□ -0.66
ATXN3-227ENST00000554491 RNF25Q96BH1 459 aaPredicted RBP10.91□□□□□ -0.66
ATXN3-227ENST00000554491 ST18O60284 1047 aa10.89□□□□□ -0.67
ATXN3-227ENST00000554491 L3MBTL3Q96JM7 780 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-227ENST00000554491 C3orf67Q6ZVT6 689 aa10.87□□□□□ -0.67
ATXN3-227ENST00000554491 RIOK3O14730 519 aaKnown RBP10.86□□□□□ -0.67
ATXN3-227ENST00000554491 EFCAB3Q8N7B9 438 aa10.85□□□□□ -0.67
ATXN3-227ENST00000554491 PCDH10Q9P2E7 1040 aa10.83□□□□□ -0.68
ATXN3-227ENST00000554491 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.81□□□□□ -0.68
ATXN3-227ENST00000554491 ZFP91Q96JP5 570 aaPredicted RBP10.81□□□□□ -0.68
ATXN3-227ENST00000554491 BOLA1Q9Y3E2 137 aa10.8□□□□□ -0.68
ATXN3-227ENST00000554491 SNPHO15079 494 aa10.78□□□□□ -0.68
ATXN3-227ENST00000554491 VGFO15240 615 aaPredicted RBP10.78□□□□□ -0.68
ATXN3-227ENST00000554491 CDAN1Q8IWY9 1227 aa10.76□□□□□ -0.69
ATXN3-227ENST00000554491 G3V3G9 751 aa10.75□□□□□ -0.69
ATXN3-227ENST00000554491 MARVELD3Q96A59 401 aa10.75□□□□□ -0.69
ATXN3-227ENST00000554491 TMEM121BQ9BXQ6 578 aaPredicted RBP10.73□□□□□ -0.69
ATXN3-227ENST00000554491 MS4A4AQ96JQ5 239 aa10.72□□□□□ -0.69
ATXN3-227ENST00000554491 PHF8Q9UPP1 1060 aa10.72□□□□□ -0.69
ATXN3-227ENST00000554491 SOX12O15370 315 aa10.7□□□□□ -0.7
ATXN3-227ENST00000554491 ECM2O94769 699 aaPredicted RBP10.7□□□□□ -0.7
ATXN3-227ENST00000554491 PKD2Q13563 968 aa10.7□□□□□ -0.7
ATXN3-227ENST00000554491 BCL11BQ9C0K0 894 aaPredicted RBP10.7□□□□□ -0.7
ATXN3-227ENST00000554491 MICALL2Q8IY33 904 aa10.68□□□□□ -0.7
ATXN3-227ENST00000554491 HOXB3P14651 431 aaPredicted RBP10.67□□□□□ -0.7
ATXN3-227ENST00000554491 STK24Q9Y6E0 443 aa10.66□□□□□ -0.7
ATXN3-227ENST00000554491 RGL2O15211 777 aa10.65□□□□□ -0.7
ATXN3-227ENST00000554491 TMEM92Q6UXU6 159 aa10.65□□□□□ -0.7
ATXN3-227ENST00000554491 EMP3P54852 163 aa10.64□□□□□ -0.71
ATXN3-227ENST00000554491 STK25O00506 426 aa10.63□□□□□ -0.71
ATXN3-227ENST00000554491 FBXO22Q8NEZ5 403 aa10.62□□□□□ -0.71
ATXN3-227ENST00000554491 TAOK2Q9UL54 1235 aa10.62□□□□□ -0.71
ATXN3-227ENST00000554491 POTEB3A0JP26 581 aa10.61□□□□□ -0.71
ATXN3-227ENST00000554491 POTEBQ6S5H4 581 aa10.61□□□□□ -0.71
ATXN3-227ENST00000554491 NLRP6P59044 892 aa10.6□□□□□ -0.71
ATXN3-227ENST00000554491 MFRPQ9BY79 579 aa10.6□□□□□ -0.71
ATXN3-227ENST00000554491 FAM205CA6NFA0 338 aa10.58□□□□□ -0.72
ATXN3-227ENST00000554491 ZNF710Q8N1W2 664 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms