RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 GALR2O43603 387 aaPredicted RBP13.17□□□□□ -0.3
CHD8-207ENST00000554384 SLC24A1O60721 1099 aa13.15□□□□□ -0.3
CHD8-207ENST00000554384 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHD8-207ENST00000554384 DCBLD2Q96PD2 775 aa13.15□□□□□ -0.3
CHD8-207ENST00000554384 PHF12Q96QT6 1004 aa13.15□□□□□ -0.3
CHD8-207ENST00000554384 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
CHD8-207ENST00000554384 DCAF8L2P0C7V8 631 aa13.06□□□□□ -0.32
CHD8-207ENST00000554384 ECM2O94769 699 aaPredicted RBP13□□□□□ -0.33
CHD8-207ENST00000554384 PLEKHG5O94827 1062 aa13□□□□□ -0.33
CHD8-207ENST00000554384 TSPYL2Q9H2G4 693 aaPredicted RBP12.99□□□□□ -0.33
CHD8-207ENST00000554384 CIZ1Q9ULV3 898 aaPredicted RBP12.97□□□□□ -0.33
CHD8-207ENST00000554384 MS4A3Q96HJ5 214 aa12.96□□□□□ -0.33
CHD8-207ENST00000554384 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
CHD8-207ENST00000554384 ZBTB47Q9UFB7 747 aaPredicted RBP12.94□□□□□ -0.34
CHD8-207ENST00000554384 CCDC61Q9Y6R9 512 aa12.93□□□□□ -0.34
CHD8-207ENST00000554384 RGL2O15211 777 aa12.92□□□□□ -0.34
CHD8-207ENST00000554384 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
CHD8-207ENST00000554384 NUBP1P53384 320 aa12.88□□□□□ -0.35
CHD8-207ENST00000554384 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
CHD8-207ENST00000554384 ASTLQ6HA08 431 aaPredicted RBP12.86□□□□□ -0.35
CHD8-207ENST00000554384 ATMINO43313 823 aaPredicted RBP12.85□□□□□ -0.35
CHD8-207ENST00000554384 KIF12Q96FN5 646 aa12.85□□□□□ -0.35
CHD8-207ENST00000554384 OTUD5Q96G74 571 aa12.83□□□□□ -0.36
CHD8-207ENST00000554384 PLCB2Q00722 1185 aa12.81□□□□□ -0.36
CHD8-207ENST00000554384 DCAF8Q5TAQ9 597 aa12.8□□□□□ -0.36
CHD8-207ENST00000554384 TRPC6Q9Y210 931 aa12.8□□□□□ -0.36
CHD8-207ENST00000554384 MAP3K13O43283 966 aa12.79□□□□□ -0.36
CHD8-207ENST00000554384 ATN1P54259 1190 aaPredicted RBP12.77□□□□□ -0.37
CHD8-207ENST00000554384 METRNQ9UJH8 293 aa12.77□□□□□ -0.37
CHD8-207ENST00000554384 POTEMA6NI47 508 aa12.75□□□□□ -0.37
CHD8-207ENST00000554384 GSE1Q14687 1217 aa12.74□□□□□ -0.37
CHD8-207ENST00000554384 POTEJP0CG39 1038 aa12.73□□□□□ -0.37
CHD8-207ENST00000554384 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
CHD8-207ENST00000554384 C7P10643 843 aa12.72□□□□□ -0.37
CHD8-207ENST00000554384 RNF25Q96BH1 459 aaPredicted RBP12.72□□□□□ -0.37
CHD8-207ENST00000554384 BMP2KQ9NSY1 1161 aaPredicted RBP12.72□□□□□ -0.37
CHD8-207ENST00000554384 CHGAP10645 457 aaKnown RBP12.68□□□□□ -0.38
CHD8-207ENST00000554384 HAP1P54257 671 aaPredicted RBP12.68□□□□□ -0.38
CHD8-207ENST00000554384 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
CHD8-207ENST00000554384 POTEGQ6S5H5 508 aa12.67□□□□□ -0.38
CHD8-207ENST00000554384 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
CHD8-207ENST00000554384 BBXQ8WY36 941 aaPredicted RBP12.67□□□□□ -0.38
CHD8-207ENST00000554384 POTEFA5A3E0 1075 aa12.65□□□□□ -0.38
CHD8-207ENST00000554384 TIE1P35590 1138 aa12.65□□□□□ -0.38
CHD8-207ENST00000554384 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
CHD8-207ENST00000554384 TTLL13PA6NNM8 815 aa12.62□□□□□ -0.39
CHD8-207ENST00000554384 PCDH10Q9P2E7 1040 aa12.62□□□□□ -0.39
CHD8-207ENST00000554384 PCDHB13Q9Y5F0 798 aa12.62□□□□□ -0.39
CHD8-207ENST00000554384 PYGBP11216 843 aa12.61□□□□□ -0.39
CHD8-207ENST00000554384 CFAP44Q96MT7 982 aa12.61□□□□□ -0.39
CHD8-207ENST00000554384 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
CHD8-207ENST00000554384 SGIP1Q9BQI5 828 aa12.59□□□□□ -0.39
CHD8-207ENST00000554384 IFNL1Q8IU54 200 aa12.58□□□□□ -0.4
CHD8-207ENST00000554384 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
CHD8-207ENST00000554384 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
CHD8-207ENST00000554384 CHRM1P11229 460 aaPredicted RBP12.54□□□□□ -0.4
CHD8-207ENST00000554384 HS6ST3Q8IZP7 471 aa12.53□□□□□ -0.4
CHD8-207ENST00000554384 TRIM35Q9UPQ4 493 aa12.53□□□□□ -0.4
CHD8-207ENST00000554384 MAMSTRQ6ZN01 415 aa12.51□□□□□ -0.41
CHD8-207ENST00000554384 SPRYD3Q8NCJ5 442 aa12.5□□□□□ -0.41
CHD8-207ENST00000554384 SEC24BO95487 1268 aa12.47□□□□□ -0.41
CHD8-207ENST00000554384 NKX1-1Q15270 411 aaPredicted RBP12.47□□□□□ -0.41
CHD8-207ENST00000554384 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
CHD8-207ENST00000554384 SCUBE2Q9NQ36 999 aa12.47□□□□□ -0.41
CHD8-207ENST00000554384 STK25O00506 426 aa12.46□□□□□ -0.41
CHD8-207ENST00000554384 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.41
CHD8-207ENST00000554384 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
CHD8-207ENST00000554384 VGFO15240 615 aaPredicted RBP12.45□□□□□ -0.42
CHD8-207ENST00000554384 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
CHD8-207ENST00000554384 IER5LQ5T953 404 aa12.44□□□□□ -0.42
CHD8-207ENST00000554384 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
CHD8-207ENST00000554384 LCE2DQ5TA82 110 aaPredicted RBP12.42□□□□□ -0.42
CHD8-207ENST00000554384 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
CHD8-207ENST00000554384 PCDHB8Q9UN66 801 aa12.41□□□□□ -0.42
CHD8-207ENST00000554384 STK24Q9Y6E0 443 aa12.4□□□□□ -0.42
CHD8-207ENST00000554384 VSIG10Q8N0Z9 540 aa12.39□□□□□ -0.43
CHD8-207ENST00000554384 TAOK2Q9UL54 1235 aa12.39□□□□□ -0.43
CHD8-207ENST00000554384 DNAJC5Q9H3Z4 198 aa12.38□□□□□ -0.43
CHD8-207ENST00000554384 FAM163AQ96GL9 167 aaPredicted RBP12.37□□□□□ -0.43
CHD8-207ENST00000554384 GTPBP6O43824 516 aaPredicted RBP12.35□□□□□ -0.43
CHD8-207ENST00000554384 IRX5P78411 483 aaPredicted RBP12.35□□□□□ -0.43
CHD8-207ENST00000554384 ZNF467Q7Z7K2 595 aaPredicted RBP12.31□□□□□ -0.44
CHD8-207ENST00000554384 PLCG2P16885 1265 aa12.3□□□□□ -0.44
CHD8-207ENST00000554384 PDAP1Q13442 181 aaKnown RBP12.27□□□□□ -0.45
CHD8-207ENST00000554384 PSEN1P49768 467 aa12.26□□□□□ -0.45
CHD8-207ENST00000554384 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
CHD8-207ENST00000554384 SLAIN1Q8ND83 568 aa12.24□□□□□ -0.45
CHD8-207ENST00000554384 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
CHD8-207ENST00000554384 ST18O60284 1047 aa12.14□□□□□ -0.47
CHD8-207ENST00000554384 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
CHD8-207ENST00000554384 CABP2Q9NPB3 220 aa12.13□□□□□ -0.47
CHD8-207ENST00000554384 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
CHD8-207ENST00000554384 MKRN3Q13064 507 aaKnown RBP12.12□□□□□ -0.47
CHD8-207ENST00000554384 EFCAB3Q8N7B9 438 aa12.12□□□□□ -0.47
CHD8-207ENST00000554384 BCANQ96GW7 911 aa12.12□□□□□ -0.47
CHD8-207ENST00000554384 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.09□□□□□ -0.47
CHD8-207ENST00000554384 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.482e-8■■■□□ 17
CHD8-207ENST00000554384 CADPS2Q86UW7 1296 aa12.07□□□□□ -0.48
CHD8-207ENST00000554384 PPP1R37O75864 691 aa12.06□□□□□ -0.48
CHD8-207ENST00000554384 RYDENQ9NUL5 291 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms