RNA–Protein interactions for RNA: ENST00000554064.5

FCF1-205, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-205ENST00000554064 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
FCF1-205ENST00000554064 FAM212AQ96EL1 285 aa11.82□□□□□ -0.52
FCF1-205ENST00000554064 CCDC61Q9Y6R9 512 aa11.82□□□□□ -0.52
FCF1-205ENST00000554064 GALR2O43603 387 aaPredicted RBP11.77□□□□□ -0.53
FCF1-205ENST00000554064 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
FCF1-205ENST00000554064 SPOCK2Q92563 424 aa11.75□□□□□ -0.53
FCF1-205ENST00000554064 MS4A3Q96HJ5 214 aa11.73□□□□□ -0.53
FCF1-205ENST00000554064 KIF12Q96FN5 646 aa11.72□□□□□ -0.53
FCF1-205ENST00000554064 DCBLD2Q96PD2 775 aa11.71□□□□□ -0.53
FCF1-205ENST00000554064 MAP3K13O43283 966 aa11.69□□□□□ -0.54
FCF1-205ENST00000554064 GSE1Q14687 1217 aa11.68□□□□□ -0.54
FCF1-205ENST00000554064 PYGBP11216 843 aa11.65□□□□□ -0.54
FCF1-205ENST00000554064 CIZ1Q9ULV3 898 aaPredicted RBP11.65□□□□□ -0.54
FCF1-205ENST00000554064 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
FCF1-205ENST00000554064 POTEIP0CG38 1075 aa11.64□□□□□ -0.55
FCF1-205ENST00000554064 SGIP1Q9BQI5 828 aa11.6□□□□□ -0.55
FCF1-205ENST00000554064 IFNL1Q8IU54 200 aa11.57□□□□□ -0.56
FCF1-205ENST00000554064 TRPC6Q9Y210 931 aa11.57□□□□□ -0.56
FCF1-205ENST00000554064 ASTLQ6HA08 431 aaPredicted RBP11.53□□□□□ -0.56
FCF1-205ENST00000554064 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
FCF1-205ENST00000554064 TIE1P35590 1138 aa11.52□□□□□ -0.57
FCF1-205ENST00000554064 BMP2KQ9NSY1 1161 aaPredicted RBP11.52□□□□□ -0.57
FCF1-205ENST00000554064 PCDHB8Q9UN66 801 aa11.51□□□□□ -0.57
FCF1-205ENST00000554064 CHRM1P11229 460 aaPredicted RBP11.5□□□□□ -0.57
FCF1-205ENST00000554064 ATN1P54259 1190 aaPredicted RBP11.49□□□□□ -0.57
FCF1-205ENST00000554064 ZNF467Q7Z7K2 595 aaPredicted RBP11.48□□□□□ -0.57
FCF1-205ENST00000554064 PELP1Q8IZL8 1130 aaKnown RBP11.48□□□□□ -0.57
FCF1-205ENST00000554064 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
FCF1-205ENST00000554064 TRIM41Q8WV44 630 aa11.47□□□□□ -0.57
FCF1-205ENST00000554064 TMEM106CQ9BVX2 250 aa11.45□□□□□ -0.58
FCF1-205ENST00000554064 SLC39A7Q92504 469 aa11.42□□□□□ -0.58
FCF1-205ENST00000554064 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
FCF1-205ENST00000554064 TRIM35Q9UPQ4 493 aa11.41□□□□□ -0.58
FCF1-205ENST00000554064 LHX8Q68G74 356 aa11.39□□□□□ -0.59
FCF1-205ENST00000554064 C7P10643 843 aa11.38□□□□□ -0.59
FCF1-205ENST00000554064 PSEN1P49768 467 aa11.37□□□□□ -0.59
FCF1-205ENST00000554064 PDAP1Q13442 181 aaKnown RBP11.35□□□□□ -0.59
FCF1-205ENST00000554064 ECM2O94769 699 aaPredicted RBP11.34□□□□□ -0.59
FCF1-205ENST00000554064 RNF25Q96BH1 459 aaPredicted RBP11.32□□□□□ -0.6
FCF1-205ENST00000554064 RIOK3O14730 519 aaKnown RBP11.31□□□□□ -0.6
FCF1-205ENST00000554064 GOLGA2Q08379 1002 aa11.31□□□□□ -0.6
FCF1-205ENST00000554064 PKD2Q13563 968 aa11.31□□□□□ -0.6
FCF1-205ENST00000554064 IER5LQ5T953 404 aa11.31□□□□□ -0.6
FCF1-205ENST00000554064 SEC24BO95487 1268 aa11.3□□□□□ -0.6
FCF1-205ENST00000554064 POTEB2H3BUK9 544 aa11.28□□□□□ -0.6
FCF1-205ENST00000554064 POTEFA5A3E0 1075 aa11.27□□□□□ -0.61
FCF1-205ENST00000554064 COLQQ9Y215 455 aaPredicted RBP11.26□□□□□ -0.61
FCF1-205ENST00000554064 VGFO15240 615 aaPredicted RBP11.25□□□□□ -0.61
FCF1-205ENST00000554064 MKRN3Q13064 507 aaKnown RBP11.25□□□□□ -0.61
FCF1-205ENST00000554064 CABP2Q9NPB3 220 aa11.25□□□□□ -0.61
FCF1-205ENST00000554064 PLCG2P16885 1265 aa11.24□□□□□ -0.61
FCF1-205ENST00000554064 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.23□□□□□ -0.61
FCF1-205ENST00000554064 ZFP91Q96JP5 570 aaPredicted RBP11.23□□□□□ -0.61
FCF1-205ENST00000554064 RGL2O15211 777 aa11.22□□□□□ -0.61
FCF1-205ENST00000554064 IRX5P78411 483 aaPredicted RBP11.21□□□□□ -0.61
FCF1-205ENST00000554064 TAOK2Q9UL54 1235 aa11.21□□□□□ -0.61
FCF1-205ENST00000554064 OCEL1Q9H607 264 aa11.18□□□□□ -0.62
FCF1-205ENST00000554064 POTEJP0CG39 1038 aa11.17□□□□□ -0.62
FCF1-205ENST00000554064 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
FCF1-205ENST00000554064 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.62
FCF1-205ENST00000554064 MAMSTRQ6ZN01 415 aa11.15□□□□□ -0.62
FCF1-205ENST00000554064 EFCAB3Q8N7B9 438 aa11.14□□□□□ -0.63
FCF1-205ENST00000554064 BCL11BQ9C0K0 894 aaPredicted RBP11.14□□□□□ -0.63
FCF1-205ENST00000554064 STK25O00506 426 aa11.13□□□□□ -0.63
FCF1-205ENST00000554064 SCUBE2Q9NQ36 999 aa11.13□□□□□ -0.63
FCF1-205ENST00000554064 STK24Q9Y6E0 443 aa11.13□□□□□ -0.63
FCF1-205ENST00000554064 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
FCF1-205ENST00000554064 ILDR1Q86SU0 546 aaPredicted RBP11.05□□□□□ -0.64
FCF1-205ENST00000554064 SOX12O15370 315 aa11.04□□□□□ -0.64
FCF1-205ENST00000554064 DPY19L2Q6NUT2 758 aa11.04□□□□□ -0.64
FCF1-205ENST00000554064 L3MBTL3Q96JM7 780 aaPredicted RBP11.03□□□□□ -0.64
FCF1-205ENST00000554064 PHF8Q9UPP1 1060 aa11.03□□□□□ -0.64
FCF1-205ENST00000554064 G3V3G9 751 aa11.01□□□□□ -0.65
FCF1-205ENST00000554064 DCAF8L2P0C7V8 631 aa10.99□□□□□ -0.65
FCF1-205ENST00000554064 C3orf67Q6ZVT6 689 aa10.99□□□□□ -0.65
FCF1-205ENST00000554064 CHGAP10645 457 aaKnown RBP10.98□□□□□ -0.65
FCF1-205ENST00000554064 HS6ST3Q8IZP7 471 aa10.98□□□□□ -0.65
FCF1-205ENST00000554064 SLAIN1Q8ND83 568 aa10.98□□□□□ -0.65
FCF1-205ENST00000554064 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.98□□□□□ -0.65
FCF1-205ENST00000554064 NLRP6P59044 892 aa10.97□□□□□ -0.65
FCF1-205ENST00000554064 AMER1Q5JTC6 1135 aaPredicted RBP10.97□□□□□ -0.65
FCF1-205ENST00000554064 BOLA1Q9Y3E2 137 aa10.97□□□□□ -0.65
FCF1-205ENST00000554064 MS4A4AQ96JQ5 239 aa10.96□□□□□ -0.65
FCF1-205ENST00000554064 MFRPQ9BY79 579 aa10.95□□□□□ -0.66
FCF1-205ENST00000554064 FBXO22Q8NEZ5 403 aa10.93□□□□□ -0.66
FCF1-205ENST00000554064 RTN4Q9NQC3 1192 aaKnown RBP10.91□□□□□ -0.66
FCF1-205ENST00000554064 MICALL2Q8IY33 904 aa10.89□□□□□ -0.67
FCF1-205ENST00000554064 TMEM121BQ9BXQ6 578 aaPredicted RBP10.87□□□□□ -0.67
FCF1-205ENST00000554064 FAM163AQ96GL9 167 aaPredicted RBP10.83□□□□□ -0.68
FCF1-205ENST00000554064 NKX1-1Q15270 411 aaPredicted RBP10.81□□□□□ -0.68
FCF1-205ENST00000554064 DNAJC5Q9H3Z4 198 aa10.81□□□□□ -0.68
FCF1-205ENST00000554064 SNPHO15079 494 aa10.78□□□□□ -0.68
FCF1-205ENST00000554064 PPP1R37O75864 691 aa10.78□□□□□ -0.68
FCF1-205ENST00000554064 TMEM92Q6UXU6 159 aa10.77□□□□□ -0.69
FCF1-205ENST00000554064 LCE2DQ5TA82 110 aaPredicted RBP10.76□□□□□ -0.69
FCF1-205ENST00000554064 RYDENQ9NUL5 291 aaKnown RBP10.76□□□□□ -0.69
FCF1-205ENST00000554064 POTEMA6NI47 508 aa10.72□□□□□ -0.69
FCF1-205ENST00000554064 ST18O60284 1047 aa10.72□□□□□ -0.69
FCF1-205ENST00000554064 POTEGQ6S5H5 508 aa10.71□□□□□ -0.69
FCF1-205ENST00000554064 GTPBP6O43824 516 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms