RNA–Protein interactions for RNA: ENST00000554042.1

AL450442.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL450442.1, Length 854 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL450442.1-201ENST00000554042 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
AL450442.1-201ENST00000554042 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
AL450442.1-201ENST00000554042 CCDC61Q9Y6R9 512 aa11.64□□□□□ -0.55
AL450442.1-201ENST00000554042 FAM212AQ96EL1 285 aa11.6□□□□□ -0.55
AL450442.1-201ENST00000554042 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
AL450442.1-201ENST00000554042 DCAF8Q5TAQ9 597 aa11.58□□□□□ -0.56
AL450442.1-201ENST00000554042 SPOCK2Q92563 424 aa11.57□□□□□ -0.56
AL450442.1-201ENST00000554042 KIF12Q96FN5 646 aa11.56□□□□□ -0.56
AL450442.1-201ENST00000554042 MS4A3Q96HJ5 214 aa11.52□□□□□ -0.57
AL450442.1-201ENST00000554042 MAP3K13O43283 966 aa11.51□□□□□ -0.57
AL450442.1-201ENST00000554042 DCBLD2Q96PD2 775 aa11.51□□□□□ -0.57
AL450442.1-201ENST00000554042 POTEIP0CG38 1075 aa11.5□□□□□ -0.57
AL450442.1-201ENST00000554042 GSE1Q14687 1217 aa11.5□□□□□ -0.57
AL450442.1-201ENST00000554042 PYGBP11216 843 aa11.45□□□□□ -0.58
AL450442.1-201ENST00000554042 SGIP1Q9BQI5 828 aa11.45□□□□□ -0.58
AL450442.1-201ENST00000554042 PCDHB13Q9Y5F0 798 aa11.44□□□□□ -0.58
AL450442.1-201ENST00000554042 CIZ1Q9ULV3 898 aaPredicted RBP11.43□□□□□ -0.58
AL450442.1-201ENST00000554042 RTN4Q9NQC3 1192 aaKnown RBP11.41□□□□□ -0.58
AL450442.1-201ENST00000554042 IFNL1Q8IU54 200 aa11.39□□□□□ -0.59
AL450442.1-201ENST00000554042 TRPC6Q9Y210 931 aa11.39□□□□□ -0.59
AL450442.1-201ENST00000554042 CHRM1P11229 460 aaPredicted RBP11.38□□□□□ -0.59
AL450442.1-201ENST00000554042 ATMINO43313 823 aaPredicted RBP11.36□□□□□ -0.59
AL450442.1-201ENST00000554042 ASTLQ6HA08 431 aaPredicted RBP11.36□□□□□ -0.59
AL450442.1-201ENST00000554042 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
AL450442.1-201ENST00000554042 BMP2KQ9NSY1 1161 aaPredicted RBP11.34□□□□□ -0.59
AL450442.1-201ENST00000554042 TIE1P35590 1138 aa11.33□□□□□ -0.6
AL450442.1-201ENST00000554042 PCDHB8Q9UN66 801 aa11.33□□□□□ -0.6
AL450442.1-201ENST00000554042 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
AL450442.1-201ENST00000554042 TTLL13PA6NNM8 815 aa11.29□□□□□ -0.6
AL450442.1-201ENST00000554042 ZNF467Q7Z7K2 595 aaPredicted RBP11.28□□□□□ -0.6
AL450442.1-201ENST00000554042 TRIM41Q8WV44 630 aa11.28□□□□□ -0.6
AL450442.1-201ENST00000554042 AMER1Q5JTC6 1135 aaPredicted RBP11.27□□□□□ -0.61
AL450442.1-201ENST00000554042 TMEM106CQ9BVX2 250 aa11.26□□□□□ -0.61
AL450442.1-201ENST00000554042 C7P10643 843 aa11.24□□□□□ -0.61
AL450442.1-201ENST00000554042 SLC39A7Q92504 469 aa11.24□□□□□ -0.61
AL450442.1-201ENST00000554042 LHX8Q68G74 356 aa11.23□□□□□ -0.61
AL450442.1-201ENST00000554042 METRNQ9UJH8 293 aa11.21□□□□□ -0.61
AL450442.1-201ENST00000554042 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.61
AL450442.1-201ENST00000554042 PKD2Q13563 968 aa11.2□□□□□ -0.62
AL450442.1-201ENST00000554042 PSEN1P49768 467 aa11.19□□□□□ -0.62
AL450442.1-201ENST00000554042 PDAP1Q13442 181 aaKnown RBP11.17□□□□□ -0.62
AL450442.1-201ENST00000554042 POTEB2H3BUK9 544 aa11.14□□□□□ -0.63
AL450442.1-201ENST00000554042 IER5LQ5T953 404 aa11.14□□□□□ -0.63
AL450442.1-201ENST00000554042 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
AL450442.1-201ENST00000554042 ECM2O94769 699 aaPredicted RBP11.13□□□□□ -0.63
AL450442.1-201ENST00000554042 RNF25Q96BH1 459 aaPredicted RBP11.13□□□□□ -0.63
AL450442.1-201ENST00000554042 POTEFA5A3E0 1075 aa11.12□□□□□ -0.63
AL450442.1-201ENST00000554042 SEC24BO95487 1268 aa11.1□□□□□ -0.63
AL450442.1-201ENST00000554042 COLQQ9Y215 455 aaPredicted RBP11.1□□□□□ -0.63
AL450442.1-201ENST00000554042 GOLGA2Q08379 1002 aa11.07□□□□□ -0.64
AL450442.1-201ENST00000554042 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
AL450442.1-201ENST00000554042 IRX5P78411 483 aaPredicted RBP11.05□□□□□ -0.64
AL450442.1-201ENST00000554042 MKRN3Q13064 507 aaKnown RBP11.05□□□□□ -0.64
AL450442.1-201ENST00000554042 RGL2O15211 777 aa11.04□□□□□ -0.64
AL450442.1-201ENST00000554042 POTEJP0CG39 1038 aa11.04□□□□□ -0.64
AL450442.1-201ENST00000554042 CABP2Q9NPB3 220 aa11.04□□□□□ -0.64
AL450442.1-201ENST00000554042 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.03□□□□□ -0.64
AL450442.1-201ENST00000554042 PLCG2P16885 1265 aa11.03□□□□□ -0.64
AL450442.1-201ENST00000554042 ZFP91Q96JP5 570 aaPredicted RBP11.03□□□□□ -0.64
AL450442.1-201ENST00000554042 OCEL1Q9H607 264 aa11.03□□□□□ -0.64
AL450442.1-201ENST00000554042 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
AL450442.1-201ENST00000554042 OTUD5Q96G74 571 aa11.01□□□□□ -0.65
AL450442.1-201ENST00000554042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.98□□□□□ -0.65
AL450442.1-201ENST00000554042 MAMSTRQ6ZN01 415 aa10.97□□□□□ -0.65
AL450442.1-201ENST00000554042 EFCAB3Q8N7B9 438 aa10.96□□□□□ -0.65
AL450442.1-201ENST00000554042 PDCD7Q8N8D1 485 aaKnown RBP10.95□□□□□ -0.66
AL450442.1-201ENST00000554042 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
AL450442.1-201ENST00000554042 BCL11BQ9C0K0 894 aaPredicted RBP10.94□□□□□ -0.66
AL450442.1-201ENST00000554042 STK25O00506 426 aa10.92□□□□□ -0.66
AL450442.1-201ENST00000554042 DCAF8L2P0C7V8 631 aa10.92□□□□□ -0.66
AL450442.1-201ENST00000554042 SCUBE2Q9NQ36 999 aa10.92□□□□□ -0.66
AL450442.1-201ENST00000554042 STK24Q9Y6E0 443 aa10.92□□□□□ -0.66
AL450442.1-201ENST00000554042 SOX12O15370 315 aa10.89□□□□□ -0.67
AL450442.1-201ENST00000554042 DPY19L2Q6NUT2 758 aa10.89□□□□□ -0.67
AL450442.1-201ENST00000554042 L3MBTL3Q96JM7 780 aaPredicted RBP10.87□□□□□ -0.67
AL450442.1-201ENST00000554042 PHF8Q9UPP1 1060 aa10.84□□□□□ -0.67
AL450442.1-201ENST00000554042 NLRP6P59044 892 aa10.8□□□□□ -0.68
AL450442.1-201ENST00000554042 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
AL450442.1-201ENST00000554042 CHGAP10645 457 aaKnown RBP10.79□□□□□ -0.68
AL450442.1-201ENST00000554042 HS6ST3Q8IZP7 471 aa10.79□□□□□ -0.68
AL450442.1-201ENST00000554042 SLAIN1Q8ND83 568 aa10.79□□□□□ -0.68
AL450442.1-201ENST00000554042 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.79□□□□□ -0.68
AL450442.1-201ENST00000554042 BOLA1Q9Y3E2 137 aa10.79□□□□□ -0.68
AL450442.1-201ENST00000554042 FBXO22Q8NEZ5 403 aa10.78□□□□□ -0.68
AL450442.1-201ENST00000554042 MFRPQ9BY79 579 aa10.78□□□□□ -0.68
AL450442.1-201ENST00000554042 G3V3G9 751 aa10.77□□□□□ -0.69
AL450442.1-201ENST00000554042 C3orf67Q6ZVT6 689 aa10.76□□□□□ -0.69
AL450442.1-201ENST00000554042 TMEM121BQ9BXQ6 578 aaPredicted RBP10.74□□□□□ -0.69
AL450442.1-201ENST00000554042 MICALL2Q8IY33 904 aa10.7□□□□□ -0.7
AL450442.1-201ENST00000554042 DNAJC5Q9H3Z4 198 aa10.69□□□□□ -0.7
AL450442.1-201ENST00000554042 FAM163AQ96GL9 167 aaPredicted RBP10.68□□□□□ -0.7
AL450442.1-201ENST00000554042 NKX1-1Q15270 411 aaPredicted RBP10.66□□□□□ -0.7
AL450442.1-201ENST00000554042 PPP1R37O75864 691 aa10.64□□□□□ -0.71
AL450442.1-201ENST00000554042 SNPHO15079 494 aa10.61□□□□□ -0.71
AL450442.1-201ENST00000554042 TMEM92Q6UXU6 159 aa10.61□□□□□ -0.71
AL450442.1-201ENST00000554042 LCE2DQ5TA82 110 aaPredicted RBP10.6□□□□□ -0.71
AL450442.1-201ENST00000554042 BBXQ8WY36 941 aaPredicted RBP10.6□□□□□ -0.71
AL450442.1-201ENST00000554042 RYDENQ9NUL5 291 aaKnown RBP10.57□□□□□ -0.72
AL450442.1-201ENST00000554042 ST18O60284 1047 aa10.56□□□□□ -0.72
AL450442.1-201ENST00000554042 GTPBP6O43824 516 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms