RNA–Protein interactions for RNA: ENST00000553857.5

UBR7-203, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-203ENST00000553857 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
UBR7-203ENST00000553857 PELP1Q8IZL8 1130 aaKnown RBP12.41□□□□□ -0.42
UBR7-203ENST00000553857 NUBP1P53384 320 aa12.37□□□□□ -0.43
UBR7-203ENST00000553857 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
UBR7-203ENST00000553857 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
UBR7-203ENST00000553857 MAP3K13O43283 966 aa12.33□□□□□ -0.44
UBR7-203ENST00000553857 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
UBR7-203ENST00000553857 ATMINO43313 823 aaPredicted RBP12.31□□□□□ -0.44
UBR7-203ENST00000553857 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
UBR7-203ENST00000553857 ATN1P54259 1190 aaPredicted RBP12.26□□□□□ -0.45
UBR7-203ENST00000553857 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
UBR7-203ENST00000553857 FBXO3Q9UK99 471 aa12.25□□□□□ -0.45
UBR7-203ENST00000553857 BMP2KQ9NSY1 1161 aaPredicted RBP12.23□□□□□ -0.45
UBR7-203ENST00000553857 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
UBR7-203ENST00000553857 METRNQ9UJH8 293 aa12.2□□□□□ -0.46
UBR7-203ENST00000553857 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
UBR7-203ENST00000553857 FAM212AQ96EL1 285 aa12.18□□□□□ -0.46
UBR7-203ENST00000553857 POTEJP0CG39 1038 aa12.17□□□□□ -0.46
UBR7-203ENST00000553857 PCDHB13Q9Y5F0 798 aa12.17□□□□□ -0.46
UBR7-203ENST00000553857 IFNL1Q8IU54 200 aa12.16□□□□□ -0.46
UBR7-203ENST00000553857 POTEFA5A3E0 1075 aa12.15□□□□□ -0.46
UBR7-203ENST00000553857 SLC39A7Q92504 469 aa12.15□□□□□ -0.46
UBR7-203ENST00000553857 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
UBR7-203ENST00000553857 C7P10643 843 aa12.13□□□□□ -0.47
UBR7-203ENST00000553857 TIE1P35590 1138 aa12.13□□□□□ -0.47
UBR7-203ENST00000553857 DCAF8Q5TAQ9 597 aa12.13□□□□□ -0.47
UBR7-203ENST00000553857 PYGBP11216 843 aa12.12□□□□□ -0.47
UBR7-203ENST00000553857 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
UBR7-203ENST00000553857 SGIP1Q9BQI5 828 aa12.1□□□□□ -0.47
UBR7-203ENST00000553857 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
UBR7-203ENST00000553857 COLQQ9Y215 455 aaPredicted RBP12.06□□□□□ -0.48
UBR7-203ENST00000553857 TRIM35Q9UPQ4 493 aa12.05□□□□□ -0.48
UBR7-203ENST00000553857 PCDHB8Q9UN66 801 aa12.03□□□□□ -0.48
UBR7-203ENST00000553857 TMEM106CQ9BVX2 250 aa12.01□□□□□ -0.49
UBR7-203ENST00000553857 GSE1Q14687 1217 aa11.95□□□□□ -0.5
UBR7-203ENST00000553857 SEC24BO95487 1268 aa11.93□□□□□ -0.5
UBR7-203ENST00000553857 IER5LQ5T953 404 aa11.92□□□□□ -0.5
UBR7-203ENST00000553857 SPOCK2Q92563 424 aa11.92□□□□□ -0.5
UBR7-203ENST00000553857 CHRM1P11229 460 aaPredicted RBP11.88□□□□□ -0.51
UBR7-203ENST00000553857 IRX5P78411 483 aaPredicted RBP11.88□□□□□ -0.51
UBR7-203ENST00000553857 MAMSTRQ6ZN01 415 aa11.87□□□□□ -0.51
UBR7-203ENST00000553857 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
UBR7-203ENST00000553857 SCUBE2Q9NQ36 999 aa11.85□□□□□ -0.51
UBR7-203ENST00000553857 LCE2DQ5TA82 110 aaPredicted RBP11.83□□□□□ -0.52
UBR7-203ENST00000553857 ZNF467Q7Z7K2 595 aaPredicted RBP11.83□□□□□ -0.52
UBR7-203ENST00000553857 PLCG2P16885 1265 aa11.8□□□□□ -0.52
UBR7-203ENST00000553857 PSEN1P49768 467 aa11.8□□□□□ -0.52
UBR7-203ENST00000553857 OCEL1Q9H607 264 aa11.77□□□□□ -0.53
UBR7-203ENST00000553857 POTEMA6NI47 508 aa11.76□□□□□ -0.53
UBR7-203ENST00000553857 POTEGQ6S5H5 508 aa11.74□□□□□ -0.53
UBR7-203ENST00000553857 PDCD7Q8N8D1 485 aaKnown RBP11.74□□□□□ -0.53
UBR7-203ENST00000553857 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
UBR7-203ENST00000553857 PDAP1Q13442 181 aaKnown RBP11.71□□□□□ -0.53
UBR7-203ENST00000553857 SLAIN1Q8ND83 568 aa11.7□□□□□ -0.54
UBR7-203ENST00000553857 MKRN3Q13064 507 aaKnown RBP11.68□□□□□ -0.54
UBR7-203ENST00000553857 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
UBR7-203ENST00000553857 RNF25Q96BH1 459 aaPredicted RBP11.67□□□□□ -0.54
UBR7-203ENST00000553857 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
UBR7-203ENST00000553857 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
UBR7-203ENST00000553857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.65□□□□□ -0.54
UBR7-203ENST00000553857 ILDR1Q86SU0 546 aaPredicted RBP11.64□□□□□ -0.55
UBR7-203ENST00000553857 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
UBR7-203ENST00000553857 PLSCR2Q9NRY7 297 aa11.58□□□□□ -0.56
UBR7-203ENST00000553857 ST18O60284 1047 aa11.57□□□□□ -0.56
UBR7-203ENST00000553857 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
UBR7-203ENST00000553857 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.57□□□□□ -0.56
UBR7-203ENST00000553857 RIOK3O14730 519 aaKnown RBP11.54□□□□□ -0.56
UBR7-203ENST00000553857 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.53□□□□□ -0.56
UBR7-203ENST00000553857 ZFP91Q96JP5 570 aaPredicted RBP11.53□□□□□ -0.56
UBR7-203ENST00000553857 L3MBTL3Q96JM7 780 aaPredicted RBP11.52□□□□□ -0.57
UBR7-203ENST00000553857 C3orf67Q6ZVT6 689 aa11.5□□□□□ -0.57
UBR7-203ENST00000553857 BOLA1Q9Y3E2 137 aa11.47□□□□□ -0.57
UBR7-203ENST00000553857 VGFO15240 615 aaPredicted RBP11.46□□□□□ -0.57
UBR7-203ENST00000553857 PKD2Q13563 968 aa11.45□□□□□ -0.58
UBR7-203ENST00000553857 MS4A4AQ96JQ5 239 aa11.45□□□□□ -0.58
UBR7-203ENST00000553857 PCDH10Q9P2E7 1040 aa11.43□□□□□ -0.58
UBR7-203ENST00000553857 MARVELD3Q96A59 401 aa11.42□□□□□ -0.58
UBR7-203ENST00000553857 PHF8Q9UPP1 1060 aa11.42□□□□□ -0.58
UBR7-203ENST00000553857 CDAN1Q8IWY9 1227 aa11.41□□□□□ -0.58
UBR7-203ENST00000553857 TMEM121BQ9BXQ6 578 aaPredicted RBP11.41□□□□□ -0.58
UBR7-203ENST00000553857 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
UBR7-203ENST00000553857 RGL2O15211 777 aa11.39□□□□□ -0.59
UBR7-203ENST00000553857 BCL11BQ9C0K0 894 aaPredicted RBP11.39□□□□□ -0.59
UBR7-203ENST00000553857 SNPHO15079 494 aa11.38□□□□□ -0.59
UBR7-203ENST00000553857 SOX12O15370 315 aa11.37□□□□□ -0.59
UBR7-203ENST00000553857 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
UBR7-203ENST00000553857 MICALL2Q8IY33 904 aa11.36□□□□□ -0.59
UBR7-203ENST00000553857 G3V3G9 751 aa11.35□□□□□ -0.59
UBR7-203ENST00000553857 HOXB3P14651 431 aaPredicted RBP11.35□□□□□ -0.59
UBR7-203ENST00000553857 STK24Q9Y6E0 443 aa11.34□□□□□ -0.59
UBR7-203ENST00000553857 FBXO22Q8NEZ5 403 aa11.33□□□□□ -0.6
UBR7-203ENST00000553857 POTEB3A0JP26 581 aa11.32□□□□□ -0.6
UBR7-203ENST00000553857 POTEBQ6S5H4 581 aa11.32□□□□□ -0.6
UBR7-203ENST00000553857 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
UBR7-203ENST00000553857 STK25O00506 426 aa11.3□□□□□ -0.6
UBR7-203ENST00000553857 EMP3P54852 163 aa11.27□□□□□ -0.61
UBR7-203ENST00000553857 NLRP6P59044 892 aa11.25□□□□□ -0.61
UBR7-203ENST00000553857 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
UBR7-203ENST00000553857 TAOK2Q9UL54 1235 aa11.23□□□□□ -0.61
UBR7-203ENST00000553857 HS3ST6Q96QI5 342 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms