RNA–Protein interactions for RNA: ENST00000553710.1

KTN1-211, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-211ENST00000553710 PAK3O75914 559 aaPredicted RBP10.02□□□□□ -0.81
KTN1-211ENST00000553710 CDAN1Q8IWY9 1227 aa10.02□□□□□ -0.81
KTN1-211ENST00000553710 SCUBE2Q9NQ36 999 aa10.01□□□□□ -0.81
KTN1-211ENST00000553710 ATMINO43313 823 aaPredicted RBP9.98□□□□□ -0.81
KTN1-211ENST00000553710 MS4A3Q96HJ5 214 aa9.9□□□□□ -0.82
KTN1-211ENST00000553710 MMRN1Q13201 1228 aa9.86□□□□□ -0.83
KTN1-211ENST00000553710 STAG3Q9UJ98 1225 aa9.85□□□□□ -0.83
KTN1-211ENST00000553710 NPM1P06748 294 aaKnown RBP eCLIP9.83□□□□□ -0.84
KTN1-211ENST00000553710 POTEFA5A3E0 1075 aa9.82□□□□□ -0.84
KTN1-211ENST00000553710 ATN1P54259 1190 aaPredicted RBP9.82□□□□□ -0.84
KTN1-211ENST00000553710 SPNS2Q8IVW8 549 aa9.79□□□□□ -0.84
KTN1-211ENST00000553710 MNX1P50219 401 aaPredicted RBP9.75□□□□□ -0.85
KTN1-211ENST00000553710 ST18O60284 1047 aa9.74□□□□□ -0.85
KTN1-211ENST00000553710 BMP2KQ9NSY1 1161 aaPredicted RBP9.68□□□□□ -0.86
KTN1-211ENST00000553710 COLQQ9Y215 455 aaPredicted RBP9.67□□□□□ -0.86
KTN1-211ENST00000553710 SEC24BO95487 1268 aa9.64□□□□□ -0.87
KTN1-211ENST00000553710 SLAIN1Q8ND83 568 aa9.62□□□□□ -0.87
KTN1-211ENST00000553710 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
KTN1-211ENST00000553710 TIE1P35590 1138 aa9.61□□□□□ -0.87
KTN1-211ENST00000553710 KIF12Q96FN5 646 aa9.61□□□□□ -0.87
KTN1-211ENST00000553710 TRPC6Q9Y210 931 aa9.61□□□□□ -0.87
KTN1-211ENST00000553710 TSPYL2Q9H2G4 693 aaPredicted RBP9.6□□□□□ -0.87
KTN1-211ENST00000553710 TMEM121BQ9BXQ6 578 aaPredicted RBP9.59□□□□□ -0.87
KTN1-211ENST00000553710 IER5LQ5T953 404 aa9.54□□□□□ -0.88
KTN1-211ENST00000553710 TTLL13PA6NNM8 815 aa9.53□□□□□ -0.88
KTN1-211ENST00000553710 MAP3K13O43283 966 aa9.5□□□□□ -0.89
KTN1-211ENST00000553710 MARVELD3Q96A59 401 aa9.48□□□□□ -0.89
KTN1-211ENST00000553710 TRIM35Q9UPQ4 493 aa9.47□□□□□ -0.89
KTN1-211ENST00000553710 SNPHO15079 494 aa9.45□□□□□ -0.9
KTN1-211ENST00000553710 SPDYE4A6NLX3 237 aa9.44□□□□□ -0.9
KTN1-211ENST00000553710 KRTAP3-3Q9BYR6 98 aa9.4□□□□□ -0.9
KTN1-211ENST00000553710 KRTAP3-2Q9BYR7 98 aa9.4□□□□□ -0.9
KTN1-211ENST00000553710 PLCG2P16885 1265 aa9.38□□□□□ -0.91
KTN1-211ENST00000553710 EMP3P54852 163 aa9.35□□□□□ -0.91
KTN1-211ENST00000553710 SGIP1Q9BQI5 828 aa9.34□□□□□ -0.91
KTN1-211ENST00000553710 POTEB3A0JP26 581 aa9.31□□□□□ -0.92
KTN1-211ENST00000553710 IRX5P78411 483 aaPredicted RBP9.31□□□□□ -0.92
KTN1-211ENST00000553710 POTEBQ6S5H4 581 aa9.31□□□□□ -0.92
KTN1-211ENST00000553710 HS3ST6Q96QI5 342 aa9.31□□□□□ -0.92
KTN1-211ENST00000553710 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.31□□□□□ -0.92
KTN1-211ENST00000553710 RASEFQ8IZ41 740 aa9.3□□□□□ -0.92
KTN1-211ENST00000553710 PCDHB13Q9Y5F0 798 aa9.29□□□□□ -0.92
KTN1-211ENST00000553710 FAM205CA6NFA0 338 aa9.26□□□□□ -0.93
KTN1-211ENST00000553710 TMEM106CQ9BVX2 250 aa9.26□□□□□ -0.93
KTN1-211ENST00000553710 OCEL1Q9H607 264 aa9.24□□□□□ -0.93
KTN1-211ENST00000553710 IFNL1Q8IU54 200 aa9.22□□□□□ -0.93
KTN1-211ENST00000553710 RNF166Q96A37 237 aaPredicted RBP9.2□□□□□ -0.94
KTN1-211ENST00000553710 PLEKHG5O94827 1062 aa9.16□□□□□ -0.94
KTN1-211ENST00000553710 C3orf67Q6ZVT6 689 aa9.12□□□□□ -0.95
KTN1-211ENST00000553710 MIER1Q8N108 512 aa9.1□□□□□ -0.95
KTN1-211ENST00000553710 PROM2Q8N271 834 aa9.1□□□□□ -0.95
KTN1-211ENST00000553710 MYT1LQ9UL68 1186 aa9.1□□□□□ -0.95
KTN1-211ENST00000553710 PDCD7Q8N8D1 485 aaKnown RBP9.05□□□□□ -0.96
KTN1-211ENST00000553710 L3MBTL3Q96JM7 780 aaPredicted RBP9.04□□□□□ -0.96
KTN1-211ENST00000553710 NUBP1P53384 320 aa9.02□□□□□ -0.97
KTN1-211ENST00000553710 HOXB1P14653 301 aaPredicted RBP8.99□□□□□ -0.97
KTN1-211ENST00000553710 ERBB3P21860 1342 aa8.99□□□□□ -0.97
KTN1-211ENST00000553710 HOXB3P14651 431 aaPredicted RBP8.98□□□□□ -0.97
KTN1-211ENST00000553710 FAM212AQ96EL1 285 aa8.97□□□□□ -0.97
KTN1-211ENST00000553710 PTGER2P43116 358 aa8.94□□□□□ -0.98
KTN1-211ENST00000553710 ZBTB47Q9UFB7 747 aaPredicted RBP8.94□□□□□ -0.98
KTN1-211ENST00000553710 ZNF710Q8N1W2 664 aa8.92□□□□□ -0.98
KTN1-211ENST00000553710 PLCD3Q8N3E9 789 aa8.92□□□□□ -0.98
KTN1-211ENST00000553710 VARS2Q5ST30 1063 aaKnown RBP8.91□□□□□ -0.98
KTN1-211ENST00000553710 PCDHB8Q9UN66 801 aa8.9□□□□□ -0.98
KTN1-211ENST00000553710 MKRN3Q13064 507 aaKnown RBP8.89□□□□□ -0.99
KTN1-211ENST00000553710 CSRNP3Q8WYN3 585 aa8.88□□□□□ -0.99
KTN1-211ENST00000553710 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.88□□□□□ -0.991e-9■■□□□ 13.9
KTN1-211ENST00000553710 ZNF687Q8N1G0 1237 aa8.87□□□□□ -0.99
KTN1-211ENST00000553710 GOLGA2Q08379 1002 aa8.86□□□□□ -0.99
KTN1-211ENST00000553710 DOK7Q18PE1 504 aa8.86□□□□□ -0.99
KTN1-211ENST00000553710 PYGBP11216 843 aa8.85□□□□□ -0.99
KTN1-211ENST00000553710 PLA2G2EQ9NZK7 142 aa8.85□□□□□ -0.99
KTN1-211ENST00000553710 ILDR1Q86SU0 546 aaPredicted RBP8.81□□□□□ -1
KTN1-211ENST00000553710 RIMBP2O15034 1052 aa8.8□□□□□ -1
KTN1-211ENST00000553710 DPY19L2Q6NUT2 758 aa8.78□□□□□ -1
KTN1-211ENST00000553710 ANKRD13DQ6ZTN6 518 aa8.78□□□□□ -1
KTN1-211ENST00000553710 DCAF8Q5TAQ9 597 aa8.77□□□□□ -1.01
KTN1-211ENST00000553710 BOLA1Q9Y3E2 137 aa8.77□□□□□ -1.01
KTN1-211ENST00000553710 G3V3G9 751 aa8.76□□□□□ -1.01
KTN1-211ENST00000553710 ZNF467Q7Z7K2 595 aaPredicted RBP8.74□□□□□ -1.01
KTN1-211ENST00000553710 ZSWIM6Q9HCJ5 1215 aa8.74□□□□□ -1.01
KTN1-211ENST00000553710 HCSTQ9UBK5 93 aa8.71□□□□□ -1.02
KTN1-211ENST00000553710 LSM11P83369 360 aaKnown RBP eCLIP8.7□□□□□ -1.02
KTN1-211ENST00000553710 GPR153Q6NV75 609 aa8.69□□□□□ -1.02
KTN1-211ENST00000553710 PSEN1P49768 467 aa8.68□□□□□ -1.02
KTN1-211ENST00000553710 IRX2Q9BZI1 471 aaPredicted RBP8.6□□□□□ -1.03
KTN1-211ENST00000553710 ZNF316A6NFI3 1004 aaPredicted RBP8.59□□□□□ -1.03
KTN1-211ENST00000553710 CHRM1P11229 460 aaPredicted RBP8.58□□□□□ -1.04
KTN1-211ENST00000553710 PDAP1Q13442 181 aaKnown RBP8.57□□□□□ -1.04
KTN1-211ENST00000553710 ARSIQ5FYB1 569 aa8.57□□□□□ -1.04
KTN1-211ENST00000553710 CABP2Q9NPB3 220 aa8.57□□□□□ -1.04
KTN1-211ENST00000553710 RGS20O76081 388 aa8.56□□□□□ -1.04
KTN1-211ENST00000553710 PBX2P40425 430 aa8.56□□□□□ -1.04
KTN1-211ENST00000553710 TMEM92Q6UXU6 159 aa8.55□□□□□ -1.04
KTN1-211ENST00000553710 GSE1Q14687 1217 aa8.54□□□□□ -1.04
KTN1-211ENST00000553710 POTEEQ6S8J3 1075 aa8.49□□□□□ -1.05
KTN1-211ENST00000553710 KHSRPQ92945 711 aaKnown RBP eCLIP8.49□□□□□ -1.05
KTN1-211ENST00000553710 MICALL2Q8IY33 904 aa8.48□□□□□ -1.05
KTN1-211ENST00000553710 AXIN2Q9Y2T1 843 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms