RNA–Protein interactions for RNA: ENST00000553696.1

NEMF-202, Transcript of nuclear export mediator factor, humanhuman

TSL 3

Gene NEMF, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-202ENST00000553696 GALR2O43603 387 aaPredicted RBP13.03□□□□□ -0.32
NEMF-202ENST00000553696 IFNLR1Q8IU57 520 aaPredicted RBP13.02□□□□□ -0.33
NEMF-202ENST00000553696 CLCN6P51797 869 aa12.99□□□□□ -0.33
NEMF-202ENST00000553696 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
NEMF-202ENST00000553696 MS4A3Q96HJ5 214 aa12.94□□□□□ -0.34
NEMF-202ENST00000553696 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
NEMF-202ENST00000553696 FAM212AQ96EL1 285 aa12.92□□□□□ -0.34
NEMF-202ENST00000553696 MAP3K13O43283 966 aa12.87□□□□□ -0.35
NEMF-202ENST00000553696 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
NEMF-202ENST00000553696 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
NEMF-202ENST00000553696 DCAF8Q5TAQ9 597 aa12.84□□□□□ -0.35
NEMF-202ENST00000553696 TRPC6Q9Y210 931 aa12.83□□□□□ -0.36
NEMF-202ENST00000553696 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
NEMF-202ENST00000553696 PYGBP11216 843 aa12.78□□□□□ -0.36
NEMF-202ENST00000553696 GSE1Q14687 1217 aa12.77□□□□□ -0.37
NEMF-202ENST00000553696 PCDHB13Q9Y5F0 798 aa12.76□□□□□ -0.37
NEMF-202ENST00000553696 IFNL1Q8IU54 200 aa12.75□□□□□ -0.37
NEMF-202ENST00000553696 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
NEMF-202ENST00000553696 LHX8Q68G74 356 aa12.74□□□□□ -0.37
NEMF-202ENST00000553696 ASTLQ6HA08 431 aaPredicted RBP12.74□□□□□ -0.37
NEMF-202ENST00000553696 ATMINO43313 823 aaPredicted RBP12.73□□□□□ -0.37
NEMF-202ENST00000553696 BMP2KQ9NSY1 1161 aaPredicted RBP12.72□□□□□ -0.37
NEMF-202ENST00000553696 CIZ1Q9ULV3 898 aaPredicted RBP12.69□□□□□ -0.38
NEMF-202ENST00000553696 TIE1P35590 1138 aa12.68□□□□□ -0.38
NEMF-202ENST00000553696 ATN1P54259 1190 aaPredicted RBP12.68□□□□□ -0.38
NEMF-202ENST00000553696 CHRM1P11229 460 aaPredicted RBP12.67□□□□□ -0.38
NEMF-202ENST00000553696 TTLL13PA6NNM8 815 aa12.65□□□□□ -0.38
NEMF-202ENST00000553696 POTEB2H3BUK9 544 aa12.65□□□□□ -0.38
NEMF-202ENST00000553696 PCDHB8Q9UN66 801 aa12.65□□□□□ -0.38
NEMF-202ENST00000553696 ZNF467Q7Z7K2 595 aaPredicted RBP12.57□□□□□ -0.4
NEMF-202ENST00000553696 TMEM106CQ9BVX2 250 aa12.57□□□□□ -0.4
NEMF-202ENST00000553696 METRNQ9UJH8 293 aa12.57□□□□□ -0.4
NEMF-202ENST00000553696 SLC39A7Q92504 469 aa12.56□□□□□ -0.4
NEMF-202ENST00000553696 TRIM35Q9UPQ4 493 aa12.56□□□□□ -0.4
NEMF-202ENST00000553696 POTEFA5A3E0 1075 aa12.53□□□□□ -0.4
NEMF-202ENST00000553696 TRIM41Q8WV44 630 aa12.53□□□□□ -0.4
NEMF-202ENST00000553696 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
NEMF-202ENST00000553696 C7P10643 843 aa12.52□□□□□ -0.41
NEMF-202ENST00000553696 RNF25Q96BH1 459 aaPredicted RBP12.51□□□□□ -0.41
NEMF-202ENST00000553696 PSEN1P49768 467 aa12.48□□□□□ -0.41
NEMF-202ENST00000553696 OTUD5Q96G74 571 aa12.48□□□□□ -0.41
NEMF-202ENST00000553696 PKD2Q13563 968 aa12.47□□□□□ -0.41
NEMF-202ENST00000553696 COLQQ9Y215 455 aaPredicted RBP12.47□□□□□ -0.41
NEMF-202ENST00000553696 PDAP1Q13442 181 aaKnown RBP12.45□□□□□ -0.42
NEMF-202ENST00000553696 IER5LQ5T953 404 aa12.45□□□□□ -0.42
NEMF-202ENST00000553696 IRX5P78411 483 aaPredicted RBP12.4□□□□□ -0.42
NEMF-202ENST00000553696 RIOK3O14730 519 aaKnown RBP12.39□□□□□ -0.43
NEMF-202ENST00000553696 ECM2O94769 699 aaPredicted RBP12.36□□□□□ -0.43
NEMF-202ENST00000553696 SEC24BO95487 1268 aa12.34□□□□□ -0.43
NEMF-202ENST00000553696 RGL2O15211 777 aa12.33□□□□□ -0.44
NEMF-202ENST00000553696 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.32□□□□□ -0.44
NEMF-202ENST00000553696 VGFO15240 615 aaPredicted RBP12.32□□□□□ -0.44
NEMF-202ENST00000553696 ZFP91Q96JP5 570 aaPredicted RBP12.32□□□□□ -0.44
NEMF-202ENST00000553696 CABP2Q9NPB3 220 aa12.32□□□□□ -0.44
NEMF-202ENST00000553696 PLCG2P16885 1265 aa12.3□□□□□ -0.44
NEMF-202ENST00000553696 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
NEMF-202ENST00000553696 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
NEMF-202ENST00000553696 OCEL1Q9H607 264 aa12.29□□□□□ -0.44
NEMF-202ENST00000553696 MKRN3Q13064 507 aaKnown RBP12.28□□□□□ -0.44
NEMF-202ENST00000553696 GOLGA2Q08379 1002 aa12.27□□□□□ -0.45
NEMF-202ENST00000553696 EFCAB3Q8N7B9 438 aa12.24□□□□□ -0.45
NEMF-202ENST00000553696 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.23□□□□□ -0.451e-6■■■□□ 18
NEMF-202ENST00000553696 MAMSTRQ6ZN01 415 aa12.2□□□□□ -0.46
NEMF-202ENST00000553696 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
NEMF-202ENST00000553696 SCUBE2Q9NQ36 999 aa12.19□□□□□ -0.46
NEMF-202ENST00000553696 DPY19L2Q6NUT2 758 aa12.18□□□□□ -0.46
NEMF-202ENST00000553696 STK25O00506 426 aa12.15□□□□□ -0.46
NEMF-202ENST00000553696 TAOK2Q9UL54 1235 aa12.15□□□□□ -0.46
NEMF-202ENST00000553696 STK24Q9Y6E0 443 aa12.15□□□□□ -0.46
NEMF-202ENST00000553696 MS4A4AQ96JQ5 239 aa12.12□□□□□ -0.47
NEMF-202ENST00000553696 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
NEMF-202ENST00000553696 SOX12O15370 315 aa12.1□□□□□ -0.47
NEMF-202ENST00000553696 LCE2DQ5TA82 110 aaPredicted RBP12.1□□□□□ -0.47
NEMF-202ENST00000553696 SLAIN1Q8ND83 568 aa12.08□□□□□ -0.48
NEMF-202ENST00000553696 FBXO22Q8NEZ5 403 aa12.08□□□□□ -0.48
NEMF-202ENST00000553696 FAM163AQ96GL9 167 aaPredicted RBP12.07□□□□□ -0.48
NEMF-202ENST00000553696 L3MBTL3Q96JM7 780 aaPredicted RBP12.07□□□□□ -0.48
NEMF-202ENST00000553696 MFRPQ9BY79 579 aa12.07□□□□□ -0.48
NEMF-202ENST00000553696 HS6ST3Q8IZP7 471 aa12.04□□□□□ -0.48
NEMF-202ENST00000553696 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
NEMF-202ENST00000553696 TMEM121BQ9BXQ6 578 aaPredicted RBP12.02□□□□□ -0.49
NEMF-202ENST00000553696 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.01□□□□□ -0.49
NEMF-202ENST00000553696 NLRP6P59044 892 aa12□□□□□ -0.49
NEMF-202ENST00000553696 C3orf67Q6ZVT6 689 aa12□□□□□ -0.49
NEMF-202ENST00000553696 POTEMA6NI47 508 aa11.98□□□□□ -0.49
NEMF-202ENST00000553696 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
NEMF-202ENST00000553696 MICALL2Q8IY33 904 aa11.98□□□□□ -0.49
NEMF-202ENST00000553696 POTEGQ6S5H5 508 aa11.97□□□□□ -0.49
NEMF-202ENST00000553696 NKX1-1Q15270 411 aaPredicted RBP11.94□□□□□ -0.5
NEMF-202ENST00000553696 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
NEMF-202ENST00000553696 RTN4Q9NQC3 1192 aaKnown RBP11.94□□□□□ -0.5
NEMF-202ENST00000553696 G3V3G9 751 aa11.92□□□□□ -0.5
NEMF-202ENST00000553696 TMEM92Q6UXU6 159 aa11.92□□□□□ -0.5
NEMF-202ENST00000553696 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
NEMF-202ENST00000553696 ST18O60284 1047 aa11.89□□□□□ -0.51
NEMF-202ENST00000553696 PPP1R37O75864 691 aa11.89□□□□□ -0.51
NEMF-202ENST00000553696 DCAF8L2P0C7V8 631 aa11.84□□□□□ -0.51
NEMF-202ENST00000553696 HOXB3P14651 431 aaPredicted RBP11.8□□□□□ -0.52
NEMF-202ENST00000553696 SNPHO15079 494 aa11.78□□□□□ -0.52
NEMF-202ENST00000553696 MARVELD3Q96A59 401 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms