RNA–Protein interactions for RNA: ENST00000553410.1

AC107958.3-201, humanhuman

TSL 3 BASIC

Gene AC107958.3, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC107958.3-201ENST00000553410 PELP1Q8IZL8 1130 aaKnown RBP8□□□□□ -1.13
AC107958.3-201ENST00000553410 MS4A3Q96HJ5 214 aa7.98□□□□□ -1.13
AC107958.3-201ENST00000553410 SCUBE2Q9NQ36 999 aa7.98□□□□□ -1.13
AC107958.3-201ENST00000553410 ATMINO43313 823 aaPredicted RBP7.97□□□□□ -1.13
AC107958.3-201ENST00000553410 MNX1P50219 401 aaPredicted RBP7.97□□□□□ -1.13
AC107958.3-201ENST00000553410 CSRNP3Q8WYN3 585 aa7.96□□□□□ -1.14
AC107958.3-201ENST00000553410 FAM163AQ96GL9 167 aaPredicted RBP7.9□□□□□ -1.14
AC107958.3-201ENST00000553410 TSPYL2Q9H2G4 693 aaPredicted RBP7.9□□□□□ -1.14
AC107958.3-201ENST00000553410 POTEJP0CG39 1038 aa7.89□□□□□ -1.15
AC107958.3-201ENST00000553410 ATN1P54259 1190 aaPredicted RBP7.88□□□□□ -1.15
AC107958.3-201ENST00000553410 PLEKHG5O94827 1062 aa7.87□□□□□ -1.15
AC107958.3-201ENST00000553410 CCDC61Q9Y6R9 512 aa7.87□□□□□ -1.15
AC107958.3-201ENST00000553410 LCE2DQ5TA82 110 aaPredicted RBP7.84□□□□□ -1.15
AC107958.3-201ENST00000553410 KIF12Q96FN5 646 aa7.84□□□□□ -1.15
AC107958.3-201ENST00000553410 SEC24BO95487 1268 aa7.83□□□□□ -1.16
AC107958.3-201ENST00000553410 TIE1P35590 1138 aa7.82□□□□□ -1.16
AC107958.3-201ENST00000553410 BMP2KQ9NSY1 1161 aaPredicted RBP7.82□□□□□ -1.16
AC107958.3-201ENST00000553410 MAP3K13O43283 966 aa7.77□□□□□ -1.17
AC107958.3-201ENST00000553410 POTEFA5A3E0 1075 aa7.76□□□□□ -1.17
AC107958.3-201ENST00000553410 TTLL13PA6NNM8 815 aa7.75□□□□□ -1.17
AC107958.3-201ENST00000553410 IER5LQ5T953 404 aa7.75□□□□□ -1.17
AC107958.3-201ENST00000553410 CDAN1Q8IWY9 1227 aa7.75□□□□□ -1.17
AC107958.3-201ENST00000553410 PROM2Q8N271 834 aa7.75□□□□□ -1.17
AC107958.3-201ENST00000553410 EHMT2Q96KQ7 1210 aa7.75□□□□□ -1.17
AC107958.3-201ENST00000553410 MIER1Q8N108 512 aa7.74□□□□□ -1.17
AC107958.3-201ENST00000553410 TRPC6Q9Y210 931 aa7.74□□□□□ -1.17
AC107958.3-201ENST00000553410 SGIP1Q9BQI5 828 aa7.72□□□□□ -1.17
AC107958.3-201ENST00000553410 TRIM35Q9UPQ4 493 aa7.72□□□□□ -1.17
AC107958.3-201ENST00000553410 COLQQ9Y215 455 aaPredicted RBP7.72□□□□□ -1.17
AC107958.3-201ENST00000553410 RASEFQ8IZ41 740 aa7.71□□□□□ -1.18
AC107958.3-201ENST00000553410 SLAIN1Q8ND83 568 aa7.69□□□□□ -1.18
AC107958.3-201ENST00000553410 ZBTB47Q9UFB7 747 aaPredicted RBP7.69□□□□□ -1.18
AC107958.3-201ENST00000553410 PCDHB13Q9Y5F0 798 aa7.69□□□□□ -1.18
AC107958.3-201ENST00000553410 ST18O60284 1047 aa7.66□□□□□ -1.18
AC107958.3-201ENST00000553410 PLCG2P16885 1265 aa7.66□□□□□ -1.18
AC107958.3-201ENST00000553410 PLCD3Q8N3E9 789 aa7.66□□□□□ -1.18
AC107958.3-201ENST00000553410 TMEM121BQ9BXQ6 578 aaPredicted RBP7.63□□□□□ -1.19
AC107958.3-201ENST00000553410 TMEM106CQ9BVX2 250 aa7.62□□□□□ -1.19
AC107958.3-201ENST00000553410 SNPHO15079 494 aa7.61□□□□□ -1.19
AC107958.3-201ENST00000553410 FAM212AQ96EL1 285 aa7.61□□□□□ -1.19
AC107958.3-201ENST00000553410 IFNL1Q8IU54 200 aa7.6□□□□□ -1.19
AC107958.3-201ENST00000553410 MMRN1Q13201 1228 aa7.57□□□□□ -1.2
AC107958.3-201ENST00000553410 IRX5P78411 483 aaPredicted RBP7.56□□□□□ -1.2
AC107958.3-201ENST00000553410 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.56□□□□□ -1.2
AC107958.3-201ENST00000553410 NUBP1P53384 320 aa7.55□□□□□ -1.2
AC107958.3-201ENST00000553410 SPNS2Q8IVW8 549 aa7.55□□□□□ -1.2
AC107958.3-201ENST00000553410 OCEL1Q9H607 264 aa7.55□□□□□ -1.2
AC107958.3-201ENST00000553410 MARVELD3Q96A59 401 aa7.49□□□□□ -1.21
AC107958.3-201ENST00000553410 C3orf67Q6ZVT6 689 aa7.48□□□□□ -1.21
AC107958.3-201ENST00000553410 EMP3P54852 163 aa7.47□□□□□ -1.21
AC107958.3-201ENST00000553410 GOLGA2Q08379 1002 aa7.46□□□□□ -1.22
AC107958.3-201ENST00000553410 DCAF8Q5TAQ9 597 aa7.46□□□□□ -1.22
AC107958.3-201ENST00000553410 PYGBP11216 843 aa7.45□□□□□ -1.22
AC107958.3-201ENST00000553410 L3MBTL3Q96JM7 780 aaPredicted RBP7.44□□□□□ -1.22
AC107958.3-201ENST00000553410 MKRN3Q13064 507 aaKnown RBP7.43□□□□□ -1.22
AC107958.3-201ENST00000553410 PCDHB8Q9UN66 801 aa7.41□□□□□ -1.22
AC107958.3-201ENST00000553410 ZNF467Q7Z7K2 595 aaPredicted RBP7.4□□□□□ -1.22
AC107958.3-201ENST00000553410 PDCD7Q8N8D1 485 aaKnown RBP7.39□□□□□ -1.23
AC107958.3-201ENST00000553410 HS3ST6Q96QI5 342 aa7.39□□□□□ -1.23
AC107958.3-201ENST00000553410 FAM205CA6NFA0 338 aa7.38□□□□□ -1.23
AC107958.3-201ENST00000553410 GSE1Q14687 1217 aa7.36□□□□□ -1.23
AC107958.3-201ENST00000553410 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
AC107958.3-201ENST00000553410 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
AC107958.3-201ENST00000553410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.36□□□□□ -1.23
AC107958.3-201ENST00000553410 G3V3G9 751 aa7.34□□□□□ -1.23
AC107958.3-201ENST00000553410 FBXO3Q9UK99 471 aa7.34□□□□□ -1.23
AC107958.3-201ENST00000553410 FKBP8Q14318 412 aa7.31□□□□□ -1.24
AC107958.3-201ENST00000553410 ZNF710Q8N1W2 664 aa7.31□□□□□ -1.24
AC107958.3-201ENST00000553410 POTEB3A0JP26 581 aa7.29□□□□□ -1.24
AC107958.3-201ENST00000553410 PSEN1P49768 467 aa7.29□□□□□ -1.24
AC107958.3-201ENST00000553410 POTEBQ6S5H4 581 aa7.29□□□□□ -1.24
AC107958.3-201ENST00000553410 KLHL34Q8N239 644 aa7.29□□□□□ -1.24
AC107958.3-201ENST00000553410 CHRM1P11229 460 aaPredicted RBP7.27□□□□□ -1.25
AC107958.3-201ENST00000553410 RIMBP2O15034 1052 aa7.26□□□□□ -1.25
AC107958.3-201ENST00000553410 DOK7Q18PE1 504 aa7.26□□□□□ -1.25
AC107958.3-201ENST00000553410 RNF166Q96A37 237 aaPredicted RBP7.26□□□□□ -1.25
AC107958.3-201ENST00000553410 BOLA1Q9Y3E2 137 aa7.26□□□□□ -1.25
AC107958.3-201ENST00000553410 ERBB3P21860 1342 aa7.26□□□□□ -1.25
AC107958.3-201ENST00000553410 HOXB1P14653 301 aaPredicted RBP7.25□□□□□ -1.25
AC107958.3-201ENST00000553410 PDAP1Q13442 181 aaKnown RBP7.25□□□□□ -1.25
AC107958.3-201ENST00000553410 ILDR1Q86SU0 546 aaPredicted RBP7.24□□□□□ -1.25
AC107958.3-201ENST00000553410 HOXB3P14651 431 aaPredicted RBP7.23□□□□□ -1.25
AC107958.3-201ENST00000553410 CABP2Q9NPB3 220 aa7.22□□□□□ -1.25
AC107958.3-201ENST00000553410 DPY19L2Q6NUT2 758 aa7.21□□□□□ -1.26
AC107958.3-201ENST00000553410 MYT1LQ9UL68 1186 aa7.21□□□□□ -1.26
AC107958.3-201ENST00000553410 PTGER2P43116 358 aa7.19□□□□□ -1.26
AC107958.3-201ENST00000553410 VASPP50552 380 aaPredicted RBP7.19□□□□□ -1.26
AC107958.3-201ENST00000553410 VARS2Q5ST30 1063 aaKnown RBP7.18□□□□□ -1.26
AC107958.3-201ENST00000553410 ZSWIM6Q9HCJ5 1215 aa7.16□□□□□ -1.26
AC107958.3-201ENST00000553410 ZNF687Q8N1G0 1237 aa7.13□□□□□ -1.27
AC107958.3-201ENST00000553410 CIZ1Q9ULV3 898 aaPredicted RBP7.13□□□□□ -1.27
AC107958.3-201ENST00000553410 SPOCK2Q92563 424 aa7.1□□□□□ -1.27
AC107958.3-201ENST00000553410 MICALL2Q8IY33 904 aa7.07□□□□□ -1.28
AC107958.3-201ENST00000553410 EFCAB3Q8N7B9 438 aa7.07□□□□□ -1.28
AC107958.3-201ENST00000553410 ANKRD13DQ6ZTN6 518 aa7.06□□□□□ -1.28
AC107958.3-201ENST00000553410 TRIM41Q8WV44 630 aa7.06□□□□□ -1.28
AC107958.3-201ENST00000553410 GPR153Q6NV75 609 aa7.05□□□□□ -1.28
AC107958.3-201ENST00000553410 SOX12O15370 315 aa7.02□□□□□ -1.29
AC107958.3-201ENST00000553410 LSM11P83369 360 aaKnown RBP eCLIP7.01□□□□□ -1.29
AC107958.3-201ENST00000553410 ARSIQ5FYB1 569 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms