RNA–Protein interactions for RNA: ENST00000553317.1

CCDC175-203, Transcript of coiled-coil domain containing 175, humanhuman

TSL 3

Gene CCDC175, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-203ENST00000553317 KIF12Q96FN5 646 aa16.52■□□□□ 0.24
CCDC175-203ENST00000553317 FKBP8Q14318 412 aa16.51■□□□□ 0.23
CCDC175-203ENST00000553317 POTEB2H3BUK9 544 aa16.5■□□□□ 0.23
CCDC175-203ENST00000553317 RASEFQ8IZ41 740 aa16.5■□□□□ 0.23
CCDC175-203ENST00000553317 ATMINO43313 823 aaPredicted RBP16.49■□□□□ 0.23
CCDC175-203ENST00000553317 OTUD5Q96G74 571 aa16.43■□□□□ 0.22
CCDC175-203ENST00000553317 PLCD3Q8N3E9 789 aa16.42■□□□□ 0.22
CCDC175-203ENST00000553317 NUBP1P53384 320 aa16.4■□□□□ 0.22
CCDC175-203ENST00000553317 MAP3K13O43283 966 aa16.38■□□□□ 0.21
CCDC175-203ENST00000553317 C7P10643 843 aa16.38■□□□□ 0.21
CCDC175-203ENST00000553317 SLC39A7Q92504 469 aa16.38■□□□□ 0.21
CCDC175-203ENST00000553317 ZBTB47Q9UFB7 747 aaPredicted RBP16.38■□□□□ 0.21
CCDC175-203ENST00000553317 METRNQ9UJH8 293 aa16.37■□□□□ 0.21
CCDC175-203ENST00000553317 ATN1P54259 1190 aaPredicted RBP16.35■□□□□ 0.21
CCDC175-203ENST00000553317 TRPC6Q9Y210 931 aa16.33■□□□□ 0.2
CCDC175-203ENST00000553317 BMP2KQ9NSY1 1161 aaPredicted RBP16.32■□□□□ 0.2
CCDC175-203ENST00000553317 TIE1P35590 1138 aa16.31■□□□□ 0.2
CCDC175-203ENST00000553317 SGIP1Q9BQI5 828 aa16.31■□□□□ 0.2
CCDC175-203ENST00000553317 POTEJP0CG39 1038 aa16.28■□□□□ 0.2
CCDC175-203ENST00000553317 POTEFA5A3E0 1075 aa16.22■□□□□ 0.19
CCDC175-203ENST00000553317 FBXO3Q9UK99 471 aa16.21■□□□□ 0.19
CCDC175-203ENST00000553317 TTLL13PA6NNM8 815 aa16.19■□□□□ 0.18
CCDC175-203ENST00000553317 FAM212AQ96EL1 285 aa16.18■□□□□ 0.18
CCDC175-203ENST00000553317 PCDHB13Q9Y5F0 798 aa16.17■□□□□ 0.18
CCDC175-203ENST00000553317 MAMSTRQ6ZN01 415 aa16.14■□□□□ 0.17
CCDC175-203ENST00000553317 IFNL1Q8IU54 200 aa16.13■□□□□ 0.17
CCDC175-203ENST00000553317 IER5LQ5T953 404 aa16.08■□□□□ 0.16
CCDC175-203ENST00000553317 COLQQ9Y215 455 aaPredicted RBP16.06■□□□□ 0.16
CCDC175-203ENST00000553317 TRIM35Q9UPQ4 493 aa16.05■□□□□ 0.16
CCDC175-203ENST00000553317 VASPP50552 380 aaPredicted RBP16.04■□□□□ 0.16
CCDC175-203ENST00000553317 SCUBE2Q9NQ36 999 aa16■□□□□ 0.15
CCDC175-203ENST00000553317 DCAF8Q5TAQ9 597 aa15.99■□□□□ 0.15
CCDC175-203ENST00000553317 TMEM106CQ9BVX2 250 aa15.96■□□□□ 0.15
CCDC175-203ENST00000553317 SEC24BO95487 1268 aa15.94■□□□□ 0.14
CCDC175-203ENST00000553317 PYGBP11216 843 aa15.94■□□□□ 0.14
CCDC175-203ENST00000553317 LCE2DQ5TA82 110 aaPredicted RBP15.93■□□□□ 0.14
CCDC175-203ENST00000553317 POTEMA6NI47 508 aa15.92■□□□□ 0.14
CCDC175-203ENST00000553317 IRX5P78411 483 aaPredicted RBP15.88■□□□□ 0.13
CCDC175-203ENST00000553317 GSE1Q14687 1217 aa15.88■□□□□ 0.13
CCDC175-203ENST00000553317 POTEGQ6S5H5 508 aa15.88■□□□□ 0.13
CCDC175-203ENST00000553317 CHRM1P11229 460 aaPredicted RBP15.87■□□□□ 0.13
CCDC175-203ENST00000553317 KLHL34Q8N239 644 aa15.85■□□□□ 0.13
CCDC175-203ENST00000553317 PCDHB8Q9UN66 801 aa15.85■□□□□ 0.13
CCDC175-203ENST00000553317 PLCG2P16885 1265 aa15.78■□□□□ 0.12
CCDC175-203ENST00000553317 ZNF467Q7Z7K2 595 aaPredicted RBP15.78■□□□□ 0.12
CCDC175-203ENST00000553317 IFNLR1Q8IU57 520 aaPredicted RBP15.77■□□□□ 0.12
CCDC175-203ENST00000553317 OCEL1Q9H607 264 aa15.76■□□□□ 0.11
CCDC175-203ENST00000553317 PCDH10Q9P2E7 1040 aa15.76■□□□□ 0.11
CCDC175-203ENST00000553317 FAM163AQ96GL9 167 aaPredicted RBP15.73■□□□□ 0.11
CCDC175-203ENST00000553317 SPOCK2Q92563 424 aa15.7■□□□□ 0.1
CCDC175-203ENST00000553317 PLSCR2Q9NRY7 297 aa15.7■□□□□ 0.1
CCDC175-203ENST00000553317 PDCD7Q8N8D1 485 aaKnown RBP15.66■□□□□ 0.1
CCDC175-203ENST00000553317 SLAIN1Q8ND83 568 aa15.65■□□□□ 0.1
CCDC175-203ENST00000553317 PSEN1P49768 467 aa15.62■□□□□ 0.09
CCDC175-203ENST00000553317 ILDR1Q86SU0 546 aaPredicted RBP15.61■□□□□ 0.09
CCDC175-203ENST00000553317 PDAP1Q13442 181 aaKnown RBP15.57■□□□□ 0.08
CCDC175-203ENST00000553317 ST18O60284 1047 aa15.53■□□□□ 0.08
CCDC175-203ENST00000553317 MKRN3Q13064 507 aaKnown RBP15.53■□□□□ 0.08
CCDC175-203ENST00000553317 CIZ1Q9ULV3 898 aaPredicted RBP15.52■□□□□ 0.08
CCDC175-203ENST00000553317 GOLGA2Q08379 1002 aa15.51■□□□□ 0.07
CCDC175-203ENST00000553317 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.51■□□□□ 0.07
CCDC175-203ENST00000553317 L3MBTL3Q96JM7 780 aaPredicted RBP15.47■□□□□ 0.07
CCDC175-203ENST00000553317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCDC175-203ENST00000553317 TRIM41Q8WV44 630 aa15.46■□□□□ 0.07
CCDC175-203ENST00000553317 SNPHO15079 494 aa15.42■□□□□ 0.06
CCDC175-203ENST00000553317 TMEM121BQ9BXQ6 578 aaPredicted RBP15.42■□□□□ 0.06
CCDC175-203ENST00000553317 CDAN1Q8IWY9 1227 aa15.39■□□□□ 0.05
CCDC175-203ENST00000553317 CABP2Q9NPB3 220 aa15.39■□□□□ 0.05
CCDC175-203ENST00000553317 C3orf67Q6ZVT6 689 aa15.37■□□□□ 0.05
CCDC175-203ENST00000553317 DPY19L2Q6NUT2 758 aa15.36■□□□□ 0.05
CCDC175-203ENST00000553317 RNF25Q96BH1 459 aaPredicted RBP15.28■□□□□ 0.04
CCDC175-203ENST00000553317 BOLA1Q9Y3E2 137 aa15.27■□□□□ 0.04
CCDC175-203ENST00000553317 EFCAB3Q8N7B9 438 aa15.24■□□□□ 0.03
CCDC175-203ENST00000553317 RIOK3O14730 519 aaKnown RBP15.22■□□□□ 0.03
CCDC175-203ENST00000553317 MARVELD3Q96A59 401 aa15.2■□□□□ 0.02
CCDC175-203ENST00000553317 VGFO15240 615 aaPredicted RBP15.16■□□□□ 0.02
CCDC175-203ENST00000553317 HOXB3P14651 431 aaPredicted RBP15.16■□□□□ 0.02
CCDC175-203ENST00000553317 SOX12O15370 315 aa15.15■□□□□ 0.02
CCDC175-203ENST00000553317 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.14■□□□□ 0.01
CCDC175-203ENST00000553317 G3V3G9 751 aa15.14■□□□□ 0.01
CCDC175-203ENST00000553317 ZFP91Q96JP5 570 aaPredicted RBP15.14■□□□□ 0.01
CCDC175-203ENST00000553317 MS4A4AQ96JQ5 239 aa15.11■□□□□ 0.01
CCDC175-203ENST00000553317 EMP3P54852 163 aa15.1■□□□□ 0.01
CCDC175-203ENST00000553317 POTEB3A0JP26 581 aa15.09■□□□□ 0.01
CCDC175-203ENST00000553317 POTEBQ6S5H4 581 aa15.09■□□□□ 0.01
CCDC175-203ENST00000553317 MICALL2Q8IY33 904 aa15.08■□□□□ 0
CCDC175-203ENST00000553317 SPNS2Q8IVW8 549 aa15.06■□□□□ 0
CCDC175-203ENST00000553317 TMEM92Q6UXU6 159 aa15.04■□□□□ -0
CCDC175-203ENST00000553317 HS3ST6Q96QI5 342 aa15.03■□□□□ -0
CCDC175-203ENST00000553317 HOXB1P14653 301 aaPredicted RBP15.02■□□□□ -0
CCDC175-203ENST00000553317 PHF8Q9UPP1 1060 aa15.02■□□□□ -0
CCDC175-203ENST00000553317 KRTAP3-3Q9BYR6 98 aa15.01□□□□□ -0.01
CCDC175-203ENST00000553317 KRTAP3-2Q9BYR7 98 aa15.01□□□□□ -0.01
CCDC175-203ENST00000553317 MMRN1Q13201 1228 aa15□□□□□ -0.01
CCDC175-203ENST00000553317 DOK7Q18PE1 504 aa15□□□□□ -0.01
CCDC175-203ENST00000553317 FAM205CA6NFA0 338 aa14.98□□□□□ -0.01
CCDC175-203ENST00000553317 FBXO22Q8NEZ5 403 aa14.98□□□□□ -0.01
CCDC175-203ENST00000553317 TAOK2Q9UL54 1235 aa14.96□□□□□ -0.01
CCDC175-203ENST00000553317 BCL11BQ9C0K0 894 aaPredicted RBP14.95□□□□□ -0.02
CCDC175-203ENST00000553317 ECM2O94769 699 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms