RNA–Protein interactions for RNA: ENST00000553175.5

LETMD1-237, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-237ENST00000553175 ATMINO43313 823 aaPredicted RBP14.64□□□□□ -0.07
LETMD1-237ENST00000553175 KIF12Q96FN5 646 aa14.58□□□□□ -0.08
LETMD1-237ENST00000553175 POTEJP0CG39 1038 aa14.56□□□□□ -0.08
LETMD1-237ENST00000553175 MIER1Q8N108 512 aa14.56□□□□□ -0.08
LETMD1-237ENST00000553175 METRNQ9UJH8 293 aa14.55□□□□□ -0.08
LETMD1-237ENST00000553175 C7P10643 843 aa14.54□□□□□ -0.08
LETMD1-237ENST00000553175 RASEFQ8IZ41 740 aa14.53□□□□□ -0.08
LETMD1-237ENST00000553175 SLC39A7Q92504 469 aa14.53□□□□□ -0.08
LETMD1-237ENST00000553175 ATN1P54259 1190 aaPredicted RBP14.51□□□□□ -0.09
LETMD1-237ENST00000553175 TRPC6Q9Y210 931 aa14.49□□□□□ -0.09
LETMD1-237ENST00000553175 MAP3K13O43283 966 aa14.47□□□□□ -0.09
LETMD1-237ENST00000553175 PLEKHG5O94827 1062 aa14.45□□□□□ -0.1
LETMD1-237ENST00000553175 BMP2KQ9NSY1 1161 aaPredicted RBP14.45□□□□□ -0.1
LETMD1-237ENST00000553175 POTEFA5A3E0 1075 aa14.42□□□□□ -0.1
LETMD1-237ENST00000553175 NUBP1P53384 320 aa14.38□□□□□ -0.11
LETMD1-237ENST00000553175 PLCD3Q8N3E9 789 aa14.38□□□□□ -0.11
LETMD1-237ENST00000553175 TIE1P35590 1138 aa14.37□□□□□ -0.11
LETMD1-237ENST00000553175 POTEMA6NI47 508 aa14.33□□□□□ -0.12
LETMD1-237ENST00000553175 MAMSTRQ6ZN01 415 aa14.32□□□□□ -0.12
LETMD1-237ENST00000553175 TTLL13PA6NNM8 815 aa14.31□□□□□ -0.12
LETMD1-237ENST00000553175 PLSCR2Q9NRY7 297 aa14.31□□□□□ -0.12
LETMD1-237ENST00000553175 SGIP1Q9BQI5 828 aa14.3□□□□□ -0.12
LETMD1-237ENST00000553175 FKBP8Q14318 412 aa14.29□□□□□ -0.12
LETMD1-237ENST00000553175 POTEGQ6S5H5 508 aa14.29□□□□□ -0.12
LETMD1-237ENST00000553175 ZBTB47Q9UFB7 747 aaPredicted RBP14.27□□□□□ -0.13
LETMD1-237ENST00000553175 COLQQ9Y215 455 aaPredicted RBP14.27□□□□□ -0.13
LETMD1-237ENST00000553175 LCE2DQ5TA82 110 aaPredicted RBP14.26□□□□□ -0.13
LETMD1-237ENST00000553175 PCDHB13Q9Y5F0 798 aa14.25□□□□□ -0.13
LETMD1-237ENST00000553175 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
LETMD1-237ENST00000553175 SCUBE2Q9NQ36 999 aa14.22□□□□□ -0.13
LETMD1-237ENST00000553175 TRIM35Q9UPQ4 493 aa14.2□□□□□ -0.14
LETMD1-237ENST00000553175 IER5LQ5T953 404 aa14.16□□□□□ -0.14
LETMD1-237ENST00000553175 FAM212AQ96EL1 285 aa14.16□□□□□ -0.14
LETMD1-237ENST00000553175 SEC24BO95487 1268 aa14.15□□□□□ -0.14
LETMD1-237ENST00000553175 FAM163AQ96GL9 167 aaPredicted RBP14.14□□□□□ -0.15
LETMD1-237ENST00000553175 PCDH10Q9P2E7 1040 aa14.1□□□□□ -0.15
LETMD1-237ENST00000553175 TMEM106CQ9BVX2 250 aa14.09□□□□□ -0.15
LETMD1-237ENST00000553175 DCAF8Q5TAQ9 597 aa14.04□□□□□ -0.16
LETMD1-237ENST00000553175 PYGBP11216 843 aa14.03□□□□□ -0.16
LETMD1-237ENST00000553175 IRX5P78411 483 aaPredicted RBP14.03□□□□□ -0.16
LETMD1-237ENST00000553175 FBXO3Q9UK99 471 aa14.02□□□□□ -0.17
LETMD1-237ENST00000553175 PCDHB8Q9UN66 801 aa13.97□□□□□ -0.17
LETMD1-237ENST00000553175 PLCG2P16885 1265 aa13.95□□□□□ -0.18
LETMD1-237ENST00000553175 SLAIN1Q8ND83 568 aa13.93□□□□□ -0.18
LETMD1-237ENST00000553175 OCEL1Q9H607 264 aa13.92□□□□□ -0.18
LETMD1-237ENST00000553175 VASPP50552 380 aaPredicted RBP13.91□□□□□ -0.18
LETMD1-237ENST00000553175 ST18O60284 1047 aa13.87□□□□□ -0.19
LETMD1-237ENST00000553175 CHRM1P11229 460 aaPredicted RBP13.84□□□□□ -0.19
LETMD1-237ENST00000553175 GSE1Q14687 1217 aa13.84□□□□□ -0.19
LETMD1-237ENST00000553175 KLHL34Q8N239 644 aa13.84□□□□□ -0.19
LETMD1-237ENST00000553175 CDAN1Q8IWY9 1227 aa13.81□□□□□ -0.2
LETMD1-237ENST00000553175 ZNF467Q7Z7K2 595 aaPredicted RBP13.79□□□□□ -0.2
LETMD1-237ENST00000553175 PDCD7Q8N8D1 485 aaKnown RBP13.79□□□□□ -0.2
LETMD1-237ENST00000553175 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.73□□□□□ -0.21
LETMD1-237ENST00000553175 PSEN1P49768 467 aa13.71□□□□□ -0.21
LETMD1-237ENST00000553175 IFNLR1Q8IU57 520 aaPredicted RBP13.71□□□□□ -0.21
LETMD1-237ENST00000553175 ILDR1Q86SU0 546 aaPredicted RBP13.69□□□□□ -0.22
LETMD1-237ENST00000553175 MKRN3Q13064 507 aaKnown RBP13.68□□□□□ -0.22
LETMD1-237ENST00000553175 TMEM121BQ9BXQ6 578 aaPredicted RBP13.66□□□□□ -0.22
LETMD1-237ENST00000553175 SNPHO15079 494 aa13.65□□□□□ -0.22
LETMD1-237ENST00000553175 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.64□□□□□ -0.23
LETMD1-237ENST00000553175 GOLGA2Q08379 1002 aa13.63□□□□□ -0.23
LETMD1-237ENST00000553175 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
LETMD1-237ENST00000553175 L3MBTL3Q96JM7 780 aaPredicted RBP13.63□□□□□ -0.23
LETMD1-237ENST00000553175 PDAP1Q13442 181 aaKnown RBP13.61□□□□□ -0.23
LETMD1-237ENST00000553175 DPY19L2Q6NUT2 758 aa13.6□□□□□ -0.23
LETMD1-237ENST00000553175 MARVELD3Q96A59 401 aa13.59□□□□□ -0.23
LETMD1-237ENST00000553175 C3orf67Q6ZVT6 689 aa13.57□□□□□ -0.24
LETMD1-237ENST00000553175 CIZ1Q9ULV3 898 aaPredicted RBP13.56□□□□□ -0.24
LETMD1-237ENST00000553175 CABP2Q9NPB3 220 aa13.53□□□□□ -0.24
LETMD1-237ENST00000553175 SPNS2Q8IVW8 549 aa13.51□□□□□ -0.25
LETMD1-237ENST00000553175 POTEB3A0JP26 581 aa13.49□□□□□ -0.25
LETMD1-237ENST00000553175 POTEBQ6S5H4 581 aa13.49□□□□□ -0.25
LETMD1-237ENST00000553175 MMRN1Q13201 1228 aa13.47□□□□□ -0.25
LETMD1-237ENST00000553175 BOLA1Q9Y3E2 137 aa13.45□□□□□ -0.26
LETMD1-237ENST00000553175 EMP3P54852 163 aa13.43□□□□□ -0.26
LETMD1-237ENST00000553175 HOXB3P14651 431 aaPredicted RBP13.41□□□□□ -0.26
LETMD1-237ENST00000553175 EFCAB3Q8N7B9 438 aa13.39□□□□□ -0.27
LETMD1-237ENST00000553175 HS3ST6Q96QI5 342 aa13.39□□□□□ -0.27
LETMD1-237ENST00000553175 KRTAP3-3Q9BYR6 98 aa13.39□□□□□ -0.27
LETMD1-237ENST00000553175 KRTAP3-2Q9BYR7 98 aa13.39□□□□□ -0.27
LETMD1-237ENST00000553175 TRIM41Q8WV44 630 aa13.37□□□□□ -0.27
LETMD1-237ENST00000553175 FAM205CA6NFA0 338 aa13.36□□□□□ -0.27
LETMD1-237ENST00000553175 G3V3G9 751 aa13.32□□□□□ -0.28
LETMD1-237ENST00000553175 RNF25Q96BH1 459 aaPredicted RBP13.3□□□□□ -0.28
LETMD1-237ENST00000553175 HOXB1P14653 301 aaPredicted RBP13.29□□□□□ -0.28
LETMD1-237ENST00000553175 TMEM92Q6UXU6 159 aa13.27□□□□□ -0.29
LETMD1-237ENST00000553175 MS4A4AQ96JQ5 239 aa13.25□□□□□ -0.29
LETMD1-237ENST00000553175 RIOK3O14730 519 aaKnown RBP13.24□□□□□ -0.29
LETMD1-237ENST00000553175 MICALL2Q8IY33 904 aa13.24□□□□□ -0.29
LETMD1-237ENST00000553175 SOX12O15370 315 aa13.23□□□□□ -0.29
LETMD1-237ENST00000553175 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.22□□□□□ -0.29
LETMD1-237ENST00000553175 DOK7Q18PE1 504 aa13.22□□□□□ -0.29
LETMD1-237ENST00000553175 ZFP91Q96JP5 570 aaPredicted RBP13.22□□□□□ -0.29
LETMD1-237ENST00000553175 ZNF710Q8N1W2 664 aa13.21□□□□□ -0.29
LETMD1-237ENST00000553175 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
LETMD1-237ENST00000553175 VGFO15240 615 aaPredicted RBP13.17□□□□□ -0.3
LETMD1-237ENST00000553175 ERBB3P21860 1342 aa13.14□□□□□ -0.31
LETMD1-237ENST00000553175 GPR153Q6NV75 609 aa13.13□□□□□ -0.31
LETMD1-237ENST00000553175 ZSWIM6Q9HCJ5 1215 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms