RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 POTEIP0CG38 1075 aa16.23■□□□□ 0.19
LETMD1-233ENST00000552433 CCDC61Q9Y6R9 512 aa16.23■□□□□ 0.19
LETMD1-233ENST00000552433 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
LETMD1-233ENST00000552433 DCBLD2Q96PD2 775 aa16.19■□□□□ 0.18
LETMD1-233ENST00000552433 MS4A3Q96HJ5 214 aa16.15■□□□□ 0.18
LETMD1-233ENST00000552433 KIF12Q96FN5 646 aa16.13■□□□□ 0.17
LETMD1-233ENST00000552433 DCAF8Q5TAQ9 597 aa16.1■□□□□ 0.17
LETMD1-233ENST00000552433 IFNLR1Q8IU57 520 aaPredicted RBP16.09■□□□□ 0.17
LETMD1-233ENST00000552433 FAM212AQ96EL1 285 aa16.09■□□□□ 0.17
LETMD1-233ENST00000552433 MAP3K13O43283 966 aa16.08■□□□□ 0.16
LETMD1-233ENST00000552433 TRPC6Q9Y210 931 aa15.99■□□□□ 0.15
LETMD1-233ENST00000552433 PYGBP11216 843 aa15.96■□□□□ 0.15
LETMD1-233ENST00000552433 PELP1Q8IZL8 1130 aaKnown RBP15.96■□□□□ 0.15
LETMD1-233ENST00000552433 PCDHB13Q9Y5F0 798 aa15.96■□□□□ 0.15
LETMD1-233ENST00000552433 SPOCK2Q92563 424 aa15.94■□□□□ 0.14
LETMD1-233ENST00000552433 ATMINO43313 823 aaPredicted RBP15.92■□□□□ 0.14
LETMD1-233ENST00000552433 LHX8Q68G74 356 aa15.91■□□□□ 0.14
LETMD1-233ENST00000552433 ASTLQ6HA08 431 aaPredicted RBP15.9■□□□□ 0.14
LETMD1-233ENST00000552433 IFNL1Q8IU54 200 aa15.89■□□□□ 0.13
LETMD1-233ENST00000552433 GSE1Q14687 1217 aa15.88■□□□□ 0.13
LETMD1-233ENST00000552433 ATN1P54259 1190 aaPredicted RBP15.87■□□□□ 0.13
LETMD1-233ENST00000552433 BMP2KQ9NSY1 1161 aaPredicted RBP15.87■□□□□ 0.13
LETMD1-233ENST00000552433 SGIP1Q9BQI5 828 aa15.86■□□□□ 0.13
LETMD1-233ENST00000552433 CIZ1Q9ULV3 898 aaPredicted RBP15.85■□□□□ 0.13
LETMD1-233ENST00000552433 TIE1P35590 1138 aa15.81■□□□□ 0.12
LETMD1-233ENST00000552433 PCDHB8Q9UN66 801 aa15.81■□□□□ 0.12
LETMD1-233ENST00000552433 TTLL13PA6NNM8 815 aa15.78■□□□□ 0.12
LETMD1-233ENST00000552433 METRNQ9UJH8 293 aa15.76■□□□□ 0.11
LETMD1-233ENST00000552433 SLC39A7Q92504 469 aa15.74■□□□□ 0.11
LETMD1-233ENST00000552433 POTEB2H3BUK9 544 aa15.73■□□□□ 0.11
LETMD1-233ENST00000552433 TMEM106CQ9BVX2 250 aa15.73■□□□□ 0.11
LETMD1-233ENST00000552433 C7P10643 843 aa15.72■□□□□ 0.11
LETMD1-233ENST00000552433 CHRM1P11229 460 aaPredicted RBP15.7■□□□□ 0.1
LETMD1-233ENST00000552433 TRIM35Q9UPQ4 493 aa15.69■□□□□ 0.1
LETMD1-233ENST00000552433 ZNF467Q7Z7K2 595 aaPredicted RBP15.63■□□□□ 0.09
LETMD1-233ENST00000552433 POTEFA5A3E0 1075 aa15.62■□□□□ 0.09
LETMD1-233ENST00000552433 COLQQ9Y215 455 aaPredicted RBP15.59■□□□□ 0.09
LETMD1-233ENST00000552433 SEC24BO95487 1268 aa15.57■□□□□ 0.08
LETMD1-233ENST00000552433 POTEJP0CG39 1038 aa15.57■□□□□ 0.08
LETMD1-233ENST00000552433 OTUD5Q96G74 571 aa15.56■□□□□ 0.08
LETMD1-233ENST00000552433 PSEN1P49768 467 aa15.55■□□□□ 0.08
LETMD1-233ENST00000552433 IER5LQ5T953 404 aa15.51■□□□□ 0.07
LETMD1-233ENST00000552433 TRIM41Q8WV44 630 aa15.49■□□□□ 0.07
LETMD1-233ENST00000552433 PDAP1Q13442 181 aaKnown RBP15.48■□□□□ 0.07
LETMD1-233ENST00000552433 IRX5P78411 483 aaPredicted RBP15.43■□□□□ 0.06
LETMD1-233ENST00000552433 PLCG2P16885 1265 aa15.42■□□□□ 0.06
LETMD1-233ENST00000552433 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
LETMD1-233ENST00000552433 RNF25Q96BH1 459 aaPredicted RBP15.41■□□□□ 0.06
LETMD1-233ENST00000552433 MKRN3Q13064 507 aaKnown RBP15.39■□□□□ 0.05
LETMD1-233ENST00000552433 OCEL1Q9H607 264 aa15.38■□□□□ 0.05
LETMD1-233ENST00000552433 CABP2Q9NPB3 220 aa15.38■□□□□ 0.05
LETMD1-233ENST00000552433 MAMSTRQ6ZN01 415 aa15.37■□□□□ 0.05
LETMD1-233ENST00000552433 RIOK3O14730 519 aaKnown RBP15.36■□□□□ 0.05
LETMD1-233ENST00000552433 SCUBE2Q9NQ36 999 aa15.35■□□□□ 0.05
LETMD1-233ENST00000552433 ECM2O94769 699 aaPredicted RBP15.34■□□□□ 0.05
LETMD1-233ENST00000552433 PKD2Q13563 968 aa15.33■□□□□ 0.04
LETMD1-233ENST00000552433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.31■□□□□ 0.04
LETMD1-233ENST00000552433 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.29■□□□□ 0.04
LETMD1-233ENST00000552433 ZFP91Q96JP5 570 aaPredicted RBP15.29■□□□□ 0.04
LETMD1-233ENST00000552433 PDCD7Q8N8D1 485 aaKnown RBP15.27■□□□□ 0.04
LETMD1-233ENST00000552433 VGFO15240 615 aaPredicted RBP15.26■□□□□ 0.03
LETMD1-233ENST00000552433 EFCAB3Q8N7B9 438 aa15.24■□□□□ 0.03
LETMD1-233ENST00000552433 RGL2O15211 777 aa15.22■□□□□ 0.03
LETMD1-233ENST00000552433 DPY19L2Q6NUT2 758 aa15.22■□□□□ 0.03
LETMD1-233ENST00000552433 ILDR1Q86SU0 546 aaPredicted RBP15.17■□□□□ 0.02
LETMD1-233ENST00000552433 SLAIN1Q8ND83 568 aa15.17■□□□□ 0.02
LETMD1-233ENST00000552433 BCL11BQ9C0K0 894 aaPredicted RBP15.14■□□□□ 0.01
LETMD1-233ENST00000552433 L3MBTL3Q96JM7 780 aaPredicted RBP15.13■□□□□ 0.01
LETMD1-233ENST00000552433 FAM163AQ96GL9 167 aaPredicted RBP15.12■□□□□ 0.01
LETMD1-233ENST00000552433 TAOK2Q9UL54 1235 aa15.12■□□□□ 0.01
LETMD1-233ENST00000552433 STK24Q9Y6E0 443 aa15.12■□□□□ 0.01
LETMD1-233ENST00000552433 STK25O00506 426 aa15.1■□□□□ 0.01
LETMD1-233ENST00000552433 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.1■□□□□ 0.01
LETMD1-233ENST00000552433 PHF8Q9UPP1 1060 aa15.07■□□□□ 0
LETMD1-233ENST00000552433 SOX12O15370 315 aa15.05■□□□□ -0
LETMD1-233ENST00000552433 C3orf67Q6ZVT6 689 aa15.05■□□□□ -0
LETMD1-233ENST00000552433 BOLA1Q9Y3E2 137 aa15.04■□□□□ -0
LETMD1-233ENST00000552433 G3V3G9 751 aa15.02■□□□□ -0
LETMD1-233ENST00000552433 MS4A4AQ96JQ5 239 aa15.01□□□□□ -0.01
LETMD1-233ENST00000552433 LCE2DQ5TA82 110 aaPredicted RBP14.99□□□□□ -0.01
LETMD1-233ENST00000552433 POTEMA6NI47 508 aa14.95□□□□□ -0.02
LETMD1-233ENST00000552433 NLRP6P59044 892 aa14.94□□□□□ -0.02
LETMD1-233ENST00000552433 POTEGQ6S5H5 508 aa14.94□□□□□ -0.02
LETMD1-233ENST00000552433 MFRPQ9BY79 579 aa14.93□□□□□ -0.02
LETMD1-233ENST00000552433 FBXO22Q8NEZ5 403 aa14.92□□□□□ -0.02
LETMD1-233ENST00000552433 TMEM121BQ9BXQ6 578 aaPredicted RBP14.91□□□□□ -0.02
LETMD1-233ENST00000552433 MICALL2Q8IY33 904 aa14.9□□□□□ -0.02
LETMD1-233ENST00000552433 ST18O60284 1047 aa14.88□□□□□ -0.03
LETMD1-233ENST00000552433 CHGAP10645 457 aaKnown RBP14.87□□□□□ -0.03
LETMD1-233ENST00000552433 SNPHO15079 494 aa14.83□□□□□ -0.04
LETMD1-233ENST00000552433 HS6ST3Q8IZP7 471 aa14.82□□□□□ -0.04
LETMD1-233ENST00000552433 TMEM92Q6UXU6 159 aa14.81□□□□□ -0.04
LETMD1-233ENST00000552433 PPP1R37O75864 691 aa14.76□□□□□ -0.05
LETMD1-233ENST00000552433 DCAF8L2P0C7V8 631 aa14.76□□□□□ -0.05
LETMD1-233ENST00000552433 MARVELD3Q96A59 401 aa14.73□□□□□ -0.05
LETMD1-233ENST00000552433 HOXB3P14651 431 aaPredicted RBP14.7□□□□□ -0.06
LETMD1-233ENST00000552433 NKX1-1Q15270 411 aaPredicted RBP14.69□□□□□ -0.06
LETMD1-233ENST00000552433 ZNF710Q8N1W2 664 aa14.63□□□□□ -0.07
LETMD1-233ENST00000552433 DOK7Q18PE1 504 aa14.61□□□□□ -0.07
LETMD1-233ENST00000552433 C2orf72A6NCS6 295 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms