RNA–Protein interactions for RNA: ENST00000552428.6

R3HDM2-214, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 430 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-214ENST00000552428 NBR1Q14596 966 aa11.34□□□□□ -0.59
R3HDM2-214ENST00000552428 RNF25Q96BH1 459 aaPredicted RBP11.3□□□□□ -0.6
R3HDM2-214ENST00000552428 RIOK3O14730 519 aaKnown RBP11.25□□□□□ -0.61
R3HDM2-214ENST00000552428 NUBP1P53384 320 aa11.25□□□□□ -0.61
R3HDM2-214ENST00000552428 NKX1-1Q15270 411 aaPredicted RBP11.22□□□□□ -0.61
R3HDM2-214ENST00000552428 AKT1S1Q96B36 256 aa11.21□□□□□ -0.61
R3HDM2-214ENST00000552428 GTPBP6O43824 516 aaPredicted RBP11.19□□□□□ -0.62
R3HDM2-214ENST00000552428 DCAF8Q5TAQ9 597 aa11.18□□□□□ -0.62
R3HDM2-214ENST00000552428 VGFO15240 615 aaPredicted RBP11.16□□□□□ -0.62
R3HDM2-214ENST00000552428 FAM212AQ96EL1 285 aa11.16□□□□□ -0.62
R3HDM2-214ENST00000552428 STK25O00506 426 aa11.14□□□□□ -0.63
R3HDM2-214ENST00000552428 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
R3HDM2-214ENST00000552428 CHRM1P11229 460 aaPredicted RBP11.13□□□□□ -0.63
R3HDM2-214ENST00000552428 SGIP1Q9BQI5 828 aa11.13□□□□□ -0.63
R3HDM2-214ENST00000552428 RYDENQ9NUL5 291 aaKnown RBP11.12□□□□□ -0.63
R3HDM2-214ENST00000552428 REM2Q8IYK8 340 aaPredicted RBP11.08□□□□□ -0.64
R3HDM2-214ENST00000552428 CREBZFQ9NS37 354 aa11.08□□□□□ -0.64
R3HDM2-214ENST00000552428 MNX1P50219 401 aaPredicted RBP11.07□□□□□ -0.64
R3HDM2-214ENST00000552428 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
R3HDM2-214ENST00000552428 PRR29P0C7W0 189 aa11.03□□□□□ -0.64
R3HDM2-214ENST00000552428 STK24Q9Y6E0 443 aa11.03□□□□□ -0.64
R3HDM2-214ENST00000552428 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.65
R3HDM2-214ENST00000552428 ZFP91Q96JP5 570 aaPredicted RBP11.02□□□□□ -0.65
R3HDM2-214ENST00000552428 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
R3HDM2-214ENST00000552428 P3H3Q8IVL6 736 aa11□□□□□ -0.65
R3HDM2-214ENST00000552428 CLEC11AQ9Y240 323 aa10.99□□□□□ -0.65
R3HDM2-214ENST00000552428 PYGBP11216 843 aa10.94□□□□□ -0.66
R3HDM2-214ENST00000552428 GTF3C3Q9Y5Q9 886 aa10.93□□□□□ -0.66
R3HDM2-214ENST00000552428 PITPNM1O00562 1244 aa10.92□□□□□ -0.66
R3HDM2-214ENST00000552428 CHRDL2Q6WN34 429 aa10.92□□□□□ -0.66
R3HDM2-214ENST00000552428 TIMELESSQ9UNS1 1208 aa10.92□□□□□ -0.66
R3HDM2-214ENST00000552428 ERICH6Q7L0X2 663 aa10.91□□□□□ -0.66
R3HDM2-214ENST00000552428 TULP1O00294 542 aaPredicted RBP10.9□□□□□ -0.66
R3HDM2-214ENST00000552428 TMEM132AQ24JP5 1023 aa10.89□□□□□ -0.67
R3HDM2-214ENST00000552428 ZNF467Q7Z7K2 595 aaPredicted RBP10.86□□□□□ -0.67
R3HDM2-214ENST00000552428 WDR70Q9NW82 654 aa10.85□□□□□ -0.67
R3HDM2-214ENST00000552428 KCNV2Q8TDN2 545 aa10.84□□□□□ -0.67
R3HDM2-214ENST00000552428 CADPS2Q86UW7 1296 aa10.81□□□□□ -0.68
R3HDM2-214ENST00000552428 PDAP1Q13442 181 aaKnown RBP10.8□□□□□ -0.68
R3HDM2-214ENST00000552428 LMOD2Q6P5Q4 547 aa10.8□□□□□ -0.68
R3HDM2-214ENST00000552428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.8□□□□□ -0.68
R3HDM2-214ENST00000552428 FXR2P51116 673 aaKnown RBP eCLIP10.76□□□□□ -0.69
R3HDM2-214ENST00000552428 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
R3HDM2-214ENST00000552428 MFRPQ9BY79 579 aa10.73□□□□□ -0.69
R3HDM2-214ENST00000552428 TSPYL2Q9H2G4 693 aaPredicted RBP10.73□□□□□ -0.69
R3HDM2-214ENST00000552428 POTEHQ6S545 545 aa10.71□□□□□ -0.69
R3HDM2-214ENST00000552428 ARHGEF1Q92888 912 aaKnown RBP10.71□□□□□ -0.69
R3HDM2-214ENST00000552428 ZNF579Q8NAF0 562 aaKnown RBP10.7□□□□□ -0.7
R3HDM2-214ENST00000552428 PSEN1P49768 467 aa10.69□□□□□ -0.7
R3HDM2-214ENST00000552428 PCDHB8Q9UN66 801 aa10.69□□□□□ -0.7
R3HDM2-214ENST00000552428 PCDHB13Q9Y5F0 798 aa10.69□□□□□ -0.7
R3HDM2-214ENST00000552428 PRKAR2AP13861 404 aaKnown RBP10.68□□□□□ -0.7
R3HDM2-214ENST00000552428 MYT1Q01538 1121 aa10.67□□□□□ -0.7
R3HDM2-214ENST00000552428 PELP1Q8IZL8 1130 aaKnown RBP10.67□□□□□ -0.7
R3HDM2-214ENST00000552428 ARXQ96QS3 562 aa10.67□□□□□ -0.7
R3HDM2-214ENST00000552428 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
R3HDM2-214ENST00000552428 CCDC61Q9Y6R9 512 aa10.66□□□□□ -0.7
R3HDM2-214ENST00000552428 BRPF1P55201 1214 aaPredicted RBP10.64□□□□□ -0.71
R3HDM2-214ENST00000552428 E2F4Q16254 413 aa10.64□□□□□ -0.71
R3HDM2-214ENST00000552428 CHADLQ6NUI6 762 aa10.64□□□□□ -0.71
R3HDM2-214ENST00000552428 NLRP6P59044 892 aa10.62□□□□□ -0.71
R3HDM2-214ENST00000552428 C14orf37Q86TY3 774 aa10.62□□□□□ -0.71
R3HDM2-214ENST00000552428 FBXO22Q8NEZ5 403 aa10.62□□□□□ -0.71
R3HDM2-214ENST00000552428 ZC3H15Q8WU90 426 aaKnown RBP10.62□□□□□ -0.71
R3HDM2-214ENST00000552428 TESPA1A2RU30 521 aaPredicted RBP10.6□□□□□ -0.71
R3HDM2-214ENST00000552428 SOX12O15370 315 aa10.6□□□□□ -0.71
R3HDM2-214ENST00000552428 PPP1R37O75864 691 aa10.6□□□□□ -0.71
R3HDM2-214ENST00000552428 EFCAB3Q8N7B9 438 aa10.57□□□□□ -0.72
R3HDM2-214ENST00000552428 SEMA3EO15041 775 aa10.56□□□□□ -0.72
R3HDM2-214ENST00000552428 IFNL1Q8IU54 200 aa10.55□□□□□ -0.72
R3HDM2-214ENST00000552428 PAK3O75914 559 aaPredicted RBP10.54□□□□□ -0.72
R3HDM2-214ENST00000552428 CABP2Q9NPB3 220 aa10.54□□□□□ -0.72
R3HDM2-214ENST00000552428 PHF8Q9UPP1 1060 aa10.54□□□□□ -0.72
R3HDM2-214ENST00000552428 NEUROD2Q15784 382 aa10.53□□□□□ -0.72
R3HDM2-214ENST00000552428 SMYD5Q6GMV2 418 aa10.52□□□□□ -0.73
R3HDM2-214ENST00000552428 SLC24A3Q9HC58 644 aa10.52□□□□□ -0.73
R3HDM2-214ENST00000552428 ARIH1Q9Y4X5 557 aaPredicted RBP10.51□□□□□ -0.73
R3HDM2-214ENST00000552428 NCKAP5LQ9HCH0 1330 aa10.51□□□□□ -0.73
R3HDM2-214ENST00000552428 ZMYND10O75800 440 aa10.5□□□□□ -0.73
R3HDM2-214ENST00000552428 PDE4AP27815 886 aa10.5□□□□□ -0.73
R3HDM2-214ENST00000552428 MFSD10Q14728 455 aa10.5□□□□□ -0.73
R3HDM2-214ENST00000552428 HAX1O00165 279 aa10.49□□□□□ -0.73
R3HDM2-214ENST00000552428 KIF12Q96FN5 646 aa10.49□□□□□ -0.73
R3HDM2-214ENST00000552428 MAP3K13O43283 966 aa10.48□□□□□ -0.73
R3HDM2-214ENST00000552428 LARP6Q9BRS8 491 aaKnown RBP10.47□□□□□ -0.73
R3HDM2-214ENST00000552428 HOMEZQ8IX15 550 aa10.46□□□□□ -0.73
R3HDM2-214ENST00000552428 CRISPLD2Q9H0B8 497 aa10.46□□□□□ -0.73
R3HDM2-214ENST00000552428 DDX27Q96GQ7 796 aaKnown RBP10.44□□□□□ -0.74
R3HDM2-214ENST00000552428 CAMK2BQ13554 666 aa10.43□□□□□ -0.74
R3HDM2-214ENST00000552428 MS4A4AQ96JQ5 239 aa10.43□□□□□ -0.74
R3HDM2-214ENST00000552428 BARGINQ6ZT62 677 aa10.41□□□□□ -0.74
R3HDM2-214ENST00000552428 C19orf67A6NJJ6 358 aa10.4□□□□□ -0.74
R3HDM2-214ENST00000552428 DAXXQ9UER7 740 aaPredicted RBP10.4□□□□□ -0.74
R3HDM2-214ENST00000552428 CD44P16070 742 aaKnown RBP10.36□□□□□ -0.75
R3HDM2-214ENST00000552428 GOLGA2Q08379 1002 aa10.35□□□□□ -0.75
R3HDM2-214ENST00000552428 AK7Q96M32 723 aa10.35□□□□□ -0.75
R3HDM2-214ENST00000552428 GPIHBP1Q8IV16 184 aa10.33□□□□□ -0.76
R3HDM2-214ENST00000552428 TTBK1Q5TCY1 1321 aaPredicted RBP10.33□□□□□ -0.76
R3HDM2-214ENST00000552428 ZRANB1Q9UGI0 708 aa10.31□□□□□ -0.76
R3HDM2-214ENST00000552428 EVX2Q03828 476 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms