RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 RTN4Q9NQC3 1192 aaKnown RBP17.3■□□□□ 0.36
CHPT1-209ENST00000552329 GSE1Q14687 1217 aa17.29■□□□□ 0.36
CHPT1-209ENST00000552329 PHF12Q96QT6 1004 aa17.26■□□□□ 0.35
CHPT1-209ENST00000552329 PYGBP11216 843 aa17.25■□□□□ 0.35
CHPT1-209ENST00000552329 PKD2Q13563 968 aa17.24■□□□□ 0.35
CHPT1-209ENST00000552329 CCDC61Q9Y6R9 512 aa17.24■□□□□ 0.35
CHPT1-209ENST00000552329 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
CHPT1-209ENST00000552329 ECM2O94769 699 aaPredicted RBP17.16■□□□□ 0.34
CHPT1-209ENST00000552329 ZNF579Q8NAF0 562 aaKnown RBP17.14■□□□□ 0.33
CHPT1-209ENST00000552329 MAP3K13O43283 966 aa17.1■□□□□ 0.33
CHPT1-209ENST00000552329 KIF12Q96FN5 646 aa17.09■□□□□ 0.33
CHPT1-209ENST00000552329 PCDHB13Q9Y5F0 798 aa17.04■□□□□ 0.32
CHPT1-209ENST00000552329 SP7Q8TDD2 431 aaPredicted RBP17.02■□□□□ 0.32
CHPT1-209ENST00000552329 TRIM41Q8WV44 630 aa17.02■□□□□ 0.32
CHPT1-209ENST00000552329 PCDHB8Q9UN66 801 aa17.02■□□□□ 0.32
CHPT1-209ENST00000552329 RGL2O15211 777 aa17.01■□□□□ 0.31
CHPT1-209ENST00000552329 MS4A3Q96HJ5 214 aa17.01■□□□□ 0.31
CHPT1-209ENST00000552329 GALR2O43603 387 aaPredicted RBP16.99■□□□□ 0.31
CHPT1-209ENST00000552329 GABBR2O75899 941 aa16.99■□□□□ 0.31
CHPT1-209ENST00000552329 CHRM1P11229 460 aaPredicted RBP16.99■□□□□ 0.31
CHPT1-209ENST00000552329 IFNL1Q8IU54 200 aa16.98■□□□□ 0.31
CHPT1-209ENST00000552329 RNF25Q96BH1 459 aaPredicted RBP16.98■□□□□ 0.31
CHPT1-209ENST00000552329 DCAF8L2P0C7V8 631 aa16.97■□□□□ 0.31
CHPT1-209ENST00000552329 TRPC6Q9Y210 931 aa16.92■□□□□ 0.3
CHPT1-209ENST00000552329 RIOK3O14730 519 aaKnown RBP16.89■□□□□ 0.29
CHPT1-209ENST00000552329 ZNF467Q7Z7K2 595 aaPredicted RBP16.88■□□□□ 0.29
CHPT1-209ENST00000552329 SGIP1Q9BQI5 828 aa16.85■□□□□ 0.29
CHPT1-209ENST00000552329 CLCN6P51797 869 aa16.79■□□□□ 0.28
CHPT1-209ENST00000552329 PSEN1P49768 467 aa16.77■□□□□ 0.28
CHPT1-209ENST00000552329 PDAP1Q13442 181 aaKnown RBP16.76■□□□□ 0.27
CHPT1-209ENST00000552329 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.75■□□□□ 0.27
CHPT1-209ENST00000552329 VGFO15240 615 aaPredicted RBP16.75■□□□□ 0.27
CHPT1-209ENST00000552329 ZFP91Q96JP5 570 aaPredicted RBP16.75■□□□□ 0.27
CHPT1-209ENST00000552329 TMEM106CQ9BVX2 250 aa16.75■□□□□ 0.27
CHPT1-209ENST00000552329 DCBLD2Q96PD2 775 aa16.74■□□□□ 0.27
CHPT1-209ENST00000552329 BMP2KQ9NSY1 1161 aaPredicted RBP16.72■□□□□ 0.27
CHPT1-209ENST00000552329 CHGAP10645 457 aaKnown RBP16.7■□□□□ 0.26
CHPT1-209ENST00000552329 STK25O00506 426 aa16.69■□□□□ 0.26
CHPT1-209ENST00000552329 TTLL13PA6NNM8 815 aa16.68■□□□□ 0.26
CHPT1-209ENST00000552329 TIE1P35590 1138 aa16.67■□□□□ 0.26
CHPT1-209ENST00000552329 BCL11BQ9C0K0 894 aaPredicted RBP16.66■□□□□ 0.26
CHPT1-209ENST00000552329 TAOK2Q9UL54 1235 aa16.66■□□□□ 0.26
CHPT1-209ENST00000552329 STK24Q9Y6E0 443 aa16.66■□□□□ 0.26
CHPT1-209ENST00000552329 POTEIP0CG38 1075 aa16.65■□□□□ 0.26
CHPT1-209ENST00000552329 ATN1P54259 1190 aaPredicted RBP16.65■□□□□ 0.26
CHPT1-209ENST00000552329 ATMINO43313 823 aaPredicted RBP16.64■□□□□ 0.25
CHPT1-209ENST00000552329 CABP2Q9NPB3 220 aa16.62■□□□□ 0.25
CHPT1-209ENST00000552329 TRIM35Q9UPQ4 493 aa16.6■□□□□ 0.25
CHPT1-209ENST00000552329 ASTLQ6HA08 431 aaPredicted RBP16.59■□□□□ 0.25
CHPT1-209ENST00000552329 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
CHPT1-209ENST00000552329 GOLGA2Q08379 1002 aa16.56■□□□□ 0.24
CHPT1-209ENST00000552329 HS6ST3Q8IZP7 471 aa16.54■□□□□ 0.24
CHPT1-209ENST00000552329 EFCAB3Q8N7B9 438 aa16.52■□□□□ 0.24
CHPT1-209ENST00000552329 MKRN3Q13064 507 aaKnown RBP16.47■□□□□ 0.23
CHPT1-209ENST00000552329 NKX1-1Q15270 411 aaPredicted RBP16.4■□□□□ 0.22
CHPT1-209ENST00000552329 METRNQ9UJH8 293 aa16.39■□□□□ 0.21
CHPT1-209ENST00000552329 SLC39A7Q92504 469 aa16.37■□□□□ 0.21
CHPT1-209ENST00000552329 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.37■□□□□ 0.218e-11■□□□□ 9.9
CHPT1-209ENST00000552329 PHF8Q9UPP1 1060 aa16.37■□□□□ 0.21
CHPT1-209ENST00000552329 SEC24BO95487 1268 aa16.36■□□□□ 0.21
CHPT1-209ENST00000552329 COLQQ9Y215 455 aaPredicted RBP16.35■□□□□ 0.21
CHPT1-209ENST00000552329 C7P10643 843 aa16.33■□□□□ 0.2
CHPT1-209ENST00000552329 BBXQ8WY36 941 aaPredicted RBP16.33■□□□□ 0.2
CHPT1-209ENST00000552329 MFRPQ9BY79 579 aa16.33■□□□□ 0.2
CHPT1-209ENST00000552329 IER5LQ5T953 404 aa16.31■□□□□ 0.2
CHPT1-209ENST00000552329 SOX12O15370 315 aa16.3■□□□□ 0.2
CHPT1-209ENST00000552329 PLCG2P16885 1265 aa16.3■□□□□ 0.2
CHPT1-209ENST00000552329 IRX5P78411 483 aaPredicted RBP16.3■□□□□ 0.2
CHPT1-209ENST00000552329 POTEFA5A3E0 1075 aa16.29■□□□□ 0.2
CHPT1-209ENST00000552329 DPY19L2Q6NUT2 758 aa16.27■□□□□ 0.2
CHPT1-209ENST00000552329 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.27■□□□□ 0.2
CHPT1-209ENST00000552329 NLRP6P59044 892 aa16.26■□□□□ 0.19
CHPT1-209ENST00000552329 OCEL1Q9H607 264 aa16.26■□□□□ 0.19
CHPT1-209ENST00000552329 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
CHPT1-209ENST00000552329 PAXIP1Q6ZW49 1069 aaPredicted RBP16.24■□□□□ 0.19
CHPT1-209ENST00000552329 PDCD7Q8N8D1 485 aaKnown RBP16.24■□□□□ 0.19
CHPT1-209ENST00000552329 MS4A4AQ96JQ5 239 aa16.24■□□□□ 0.19
CHPT1-209ENST00000552329 CFAP44Q96MT7 982 aa16.24■□□□□ 0.19
CHPT1-209ENST00000552329 FBXO22Q8NEZ5 403 aa16.23■□□□□ 0.19
CHPT1-209ENST00000552329 GTPBP6O43824 516 aaPredicted RBP16.2■□□□□ 0.18
CHPT1-209ENST00000552329 PPP1R37O75864 691 aa16.17■□□□□ 0.18
CHPT1-209ENST00000552329 ILDR1Q86SU0 546 aaPredicted RBP16.17■□□□□ 0.18
CHPT1-209ENST00000552329 SPRYD3Q8NCJ5 442 aa16.16■□□□□ 0.18
CHPT1-209ENST00000552329 POTEB2H3BUK9 544 aa16.15■□□□□ 0.18
CHPT1-209ENST00000552329 RYDENQ9NUL5 291 aaKnown RBP16.08■□□□□ 0.16
CHPT1-209ENST00000552329 POTEJP0CG39 1038 aa16.07■□□□□ 0.16
CHPT1-209ENST00000552329 G3V3G9 751 aa16.05■□□□□ 0.16
CHPT1-209ENST00000552329 BOLA1Q9Y3E2 137 aa16.05■□□□□ 0.16
CHPT1-209ENST00000552329 PLCB2Q00722 1185 aa16.02■□□□□ 0.16
CHPT1-209ENST00000552329 L3MBTL3Q96JM7 780 aaPredicted RBP16.02■□□□□ 0.16
CHPT1-209ENST00000552329 LHX8Q68G74 356 aa16.01■□□□□ 0.15
CHPT1-209ENST00000552329 MICALL2Q8IY33 904 aa16.01■□□□□ 0.15
CHPT1-209ENST00000552329 C3orf67Q6ZVT6 689 aa15.94■□□□□ 0.14
CHPT1-209ENST00000552329 TSHZ2Q9NRE2 1034 aa15.92■□□□□ 0.14
CHPT1-209ENST00000552329 HAP1P54257 671 aaPredicted RBP15.91■□□□□ 0.14
CHPT1-209ENST00000552329 TMEM121BQ9BXQ6 578 aaPredicted RBP15.91■□□□□ 0.14
CHPT1-209ENST00000552329 CADPS2Q86UW7 1296 aa15.89■□□□□ 0.13
CHPT1-209ENST00000552329 SCUBE2Q9NQ36 999 aa15.87■□□□□ 0.13
CHPT1-209ENST00000552329 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.87■□□□□ 0.13
CHPT1-209ENST00000552329 OTUD5Q96G74 571 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms