RNA–Protein interactions for RNA: ENST00000552275.1

ATP2B1-210, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-210ENST00000552275 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.74□□□□□ -0.21
ATP2B1-210ENST00000552275 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
ATP2B1-210ENST00000552275 NUBP1P53384 320 aa13.69□□□□□ -0.22
ATP2B1-210ENST00000552275 GSE1Q14687 1217 aa13.69□□□□□ -0.22
ATP2B1-210ENST00000552275 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
ATP2B1-210ENST00000552275 FARP1Q9Y4F1 1045 aaPredicted RBP13.64□□□□□ -0.23
ATP2B1-210ENST00000552275 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
ATP2B1-210ENST00000552275 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
ATP2B1-210ENST00000552275 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
ATP2B1-210ENST00000552275 CHGAP10645 457 aaKnown RBP13.61□□□□□ -0.23
ATP2B1-210ENST00000552275 DCAF8Q5TAQ9 597 aa13.58□□□□□ -0.24
ATP2B1-210ENST00000552275 RNF25Q96BH1 459 aaPredicted RBP13.58□□□□□ -0.24
ATP2B1-210ENST00000552275 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
ATP2B1-210ENST00000552275 FAM212AQ96EL1 285 aa13.56□□□□□ -0.24
ATP2B1-210ENST00000552275 CD44P16070 742 aaKnown RBP13.55□□□□□ -0.24
ATP2B1-210ENST00000552275 HS6ST3Q8IZP7 471 aa13.55□□□□□ -0.24
ATP2B1-210ENST00000552275 SPRYD3Q8NCJ5 442 aa13.55□□□□□ -0.24
ATP2B1-210ENST00000552275 GABBR2O75899 941 aa13.53□□□□□ -0.24
ATP2B1-210ENST00000552275 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
ATP2B1-210ENST00000552275 RIOK3O14730 519 aaKnown RBP13.49□□□□□ -0.25
ATP2B1-210ENST00000552275 TAOK2Q9UL54 1235 aa13.48□□□□□ -0.25
ATP2B1-210ENST00000552275 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
ATP2B1-210ENST00000552275 CHRM1P11229 460 aaPredicted RBP13.46□□□□□ -0.25
ATP2B1-210ENST00000552275 KDM2AQ9Y2K7 1162 aa13.45□□□□□ -0.26
ATP2B1-210ENST00000552275 BCANQ96GW7 911 aa13.42□□□□□ -0.26
ATP2B1-210ENST00000552275 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
ATP2B1-210ENST00000552275 VGFO15240 615 aaPredicted RBP13.4□□□□□ -0.26
ATP2B1-210ENST00000552275 ZRANB1Q9UGI0 708 aa13.39□□□□□ -0.27
ATP2B1-210ENST00000552275 STK25O00506 426 aa13.34□□□□□ -0.27
ATP2B1-210ENST00000552275 NKX1-1Q15270 411 aaPredicted RBP13.34□□□□□ -0.27
ATP2B1-210ENST00000552275 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
ATP2B1-210ENST00000552275 PYGBP11216 843 aa13.33□□□□□ -0.28
ATP2B1-210ENST00000552275 CLCN6P51797 869 aa13.3□□□□□ -0.28
ATP2B1-210ENST00000552275 ZNF579Q8NAF0 562 aaKnown RBP13.29□□□□□ -0.28
ATP2B1-210ENST00000552275 PAK3O75914 559 aaPredicted RBP13.28□□□□□ -0.28
ATP2B1-210ENST00000552275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.27□□□□□ -0.29
ATP2B1-210ENST00000552275 ZFP91Q96JP5 570 aaPredicted RBP13.27□□□□□ -0.29
ATP2B1-210ENST00000552275 GTPBP6O43824 516 aaPredicted RBP13.26□□□□□ -0.29
ATP2B1-210ENST00000552275 BCL11BQ9C0K0 894 aaPredicted RBP13.25□□□□□ -0.29
ATP2B1-210ENST00000552275 TSPYL2Q9H2G4 693 aaPredicted RBP13.24□□□□□ -0.29
ATP2B1-210ENST00000552275 STK24Q9Y6E0 443 aa13.24□□□□□ -0.29
ATP2B1-210ENST00000552275 POTEIP0CG38 1075 aa13.22□□□□□ -0.29
ATP2B1-210ENST00000552275 DCBLD2Q96PD2 775 aa13.21□□□□□ -0.29
ATP2B1-210ENST00000552275 ZNF467Q7Z7K2 595 aaPredicted RBP13.2□□□□□ -0.3
ATP2B1-210ENST00000552275 PHF12Q96QT6 1004 aa13.19□□□□□ -0.3
ATP2B1-210ENST00000552275 RYDENQ9NUL5 291 aaKnown RBP13.17□□□□□ -0.3
ATP2B1-210ENST00000552275 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
ATP2B1-210ENST00000552275 LHX8Q68G74 356 aa13.15□□□□□ -0.3
ATP2B1-210ENST00000552275 CCDC61Q9Y6R9 512 aa13.15□□□□□ -0.3
ATP2B1-210ENST00000552275 PDAP1Q13442 181 aaKnown RBP13.12□□□□□ -0.31
ATP2B1-210ENST00000552275 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
ATP2B1-210ENST00000552275 PCDHB13Q9Y5F0 798 aa13.09□□□□□ -0.31
ATP2B1-210ENST00000552275 PRKCSHP14314 528 aaPredicted RBP13.06□□□□□ -0.32
ATP2B1-210ENST00000552275 PSEN1P49768 467 aa13.03□□□□□ -0.32
ATP2B1-210ENST00000552275 NBR1Q14596 966 aa13.01□□□□□ -0.33
ATP2B1-210ENST00000552275 MS4A3Q96HJ5 214 aa13□□□□□ -0.33
ATP2B1-210ENST00000552275 IFNL1Q8IU54 200 aa12.98□□□□□ -0.33
ATP2B1-210ENST00000552275 TPRNQ4KMQ1 711 aa12.97□□□□□ -0.33
ATP2B1-210ENST00000552275 KIF12Q96FN5 646 aa12.97□□□□□ -0.33
ATP2B1-210ENST00000552275 MAP3K13O43283 966 aa12.96□□□□□ -0.33
ATP2B1-210ENST00000552275 MFRPQ9BY79 579 aa12.93□□□□□ -0.34
ATP2B1-210ENST00000552275 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
ATP2B1-210ENST00000552275 ATMINO43313 823 aaPredicted RBP12.87□□□□□ -0.35
ATP2B1-210ENST00000552275 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
ATP2B1-210ENST00000552275 ASTLQ6HA08 431 aaPredicted RBP12.86□□□□□ -0.35
ATP2B1-210ENST00000552275 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
ATP2B1-210ENST00000552275 EFCAB3Q8N7B9 438 aa12.85□□□□□ -0.35
ATP2B1-210ENST00000552275 SOX12O15370 315 aa12.84□□□□□ -0.35
ATP2B1-210ENST00000552275 NLRP6P59044 892 aa12.83□□□□□ -0.36
ATP2B1-210ENST00000552275 P3H3Q8IVL6 736 aa12.83□□□□□ -0.36
ATP2B1-210ENST00000552275 FBXO22Q8NEZ5 403 aa12.83□□□□□ -0.36
ATP2B1-210ENST00000552275 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
ATP2B1-210ENST00000552275 WDR70Q9NW82 654 aa12.8□□□□□ -0.36
ATP2B1-210ENST00000552275 TRPC6Q9Y210 931 aa12.8□□□□□ -0.36
ATP2B1-210ENST00000552275 ATN1P54259 1190 aaPredicted RBP12.79□□□□□ -0.36
ATP2B1-210ENST00000552275 METRNQ9UJH8 293 aa12.79□□□□□ -0.36
ATP2B1-210ENST00000552275 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
ATP2B1-210ENST00000552275 PPP1R37O75864 691 aa12.78□□□□□ -0.36
ATP2B1-210ENST00000552275 SLC39A7Q92504 469 aa12.78□□□□□ -0.36
ATP2B1-210ENST00000552275 C7P10643 843 aa12.77□□□□□ -0.37
ATP2B1-210ENST00000552275 BMP2KQ9NSY1 1161 aaPredicted RBP12.75□□□□□ -0.37
ATP2B1-210ENST00000552275 KCNV2Q8TDN2 545 aa12.74□□□□□ -0.37
ATP2B1-210ENST00000552275 OTUD5Q96G74 571 aa12.73□□□□□ -0.37
ATP2B1-210ENST00000552275 TIE1P35590 1138 aa12.72□□□□□ -0.37
ATP2B1-210ENST00000552275 TMEM106CQ9BVX2 250 aa12.71□□□□□ -0.37
ATP2B1-210ENST00000552275 GOLGA2Q08379 1002 aa12.68□□□□□ -0.38
ATP2B1-210ENST00000552275 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
ATP2B1-210ENST00000552275 TTLL13PA6NNM8 815 aa12.67□□□□□ -0.38
ATP2B1-210ENST00000552275 POTEJP0CG39 1038 aa12.63□□□□□ -0.39
ATP2B1-210ENST00000552275 MKRN3Q13064 507 aaKnown RBP12.61□□□□□ -0.39
ATP2B1-210ENST00000552275 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
ATP2B1-210ENST00000552275 SEC24BO95487 1268 aa12.6□□□□□ -0.39
ATP2B1-210ENST00000552275 E2F4Q16254 413 aa12.6□□□□□ -0.39
ATP2B1-210ENST00000552275 NCKAP5LQ9HCH0 1330 aa12.6□□□□□ -0.39
ATP2B1-210ENST00000552275 POTEFA5A3E0 1075 aa12.59□□□□□ -0.39
ATP2B1-210ENST00000552275 ARHGEF1Q92888 912 aaKnown RBP12.59□□□□□ -0.39
ATP2B1-210ENST00000552275 MAMSTRQ6ZN01 415 aa12.58□□□□□ -0.4
ATP2B1-210ENST00000552275 PDE4AP27815 886 aa12.56□□□□□ -0.4
ATP2B1-210ENST00000552275 CRISPLD2Q9H0B8 497 aa12.56□□□□□ -0.4
ATP2B1-210ENST00000552275 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms