RNA–Protein interactions for RNA: ENST00000551831.5

ATF1-203, Transcript of activating transcription factor 1, humanhuman

TSL 2

Gene ATF1, Length 970 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-203ENST00000551831 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
ATF1-203ENST00000551831 GALR2O43603 387 aaPredicted RBP11.73□□□□□ -0.53
ATF1-203ENST00000551831 IFNLR1Q8IU57 520 aaPredicted RBP11.71□□□□□ -0.53
ATF1-203ENST00000551831 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
ATF1-203ENST00000551831 DCAF8Q5TAQ9 597 aa11.68□□□□□ -0.54
ATF1-203ENST00000551831 DCBLD2Q96PD2 775 aa11.67□□□□□ -0.54
ATF1-203ENST00000551831 KIF12Q96FN5 646 aa11.66□□□□□ -0.54
ATF1-203ENST00000551831 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
ATF1-203ENST00000551831 MS4A3Q96HJ5 214 aa11.65□□□□□ -0.54
ATF1-203ENST00000551831 MAP3K13O43283 966 aa11.62□□□□□ -0.55
ATF1-203ENST00000551831 SPOCK2Q92563 424 aa11.61□□□□□ -0.55
ATF1-203ENST00000551831 PYGBP11216 843 aa11.56□□□□□ -0.56
ATF1-203ENST00000551831 GSE1Q14687 1217 aa11.55□□□□□ -0.56
ATF1-203ENST00000551831 AMER1Q5JTC6 1135 aaPredicted RBP11.55□□□□□ -0.56
ATF1-203ENST00000551831 PCDHB13Q9Y5F0 798 aa11.55□□□□□ -0.56
ATF1-203ENST00000551831 CIZ1Q9ULV3 898 aaPredicted RBP11.53□□□□□ -0.56
ATF1-203ENST00000551831 TRPC6Q9Y210 931 aa11.53□□□□□ -0.56
ATF1-203ENST00000551831 IFNL1Q8IU54 200 aa11.5□□□□□ -0.57
ATF1-203ENST00000551831 SGIP1Q9BQI5 828 aa11.49□□□□□ -0.57
ATF1-203ENST00000551831 ATMINO43313 823 aaPredicted RBP11.48□□□□□ -0.57
ATF1-203ENST00000551831 PELP1Q8IZL8 1130 aaKnown RBP11.48□□□□□ -0.57
ATF1-203ENST00000551831 ASTLQ6HA08 431 aaPredicted RBP11.47□□□□□ -0.57
ATF1-203ENST00000551831 RTN4Q9NQC3 1192 aaKnown RBP11.45□□□□□ -0.58
ATF1-203ENST00000551831 BMP2KQ9NSY1 1161 aaPredicted RBP11.45□□□□□ -0.58
ATF1-203ENST00000551831 PCDHB8Q9UN66 801 aa11.45□□□□□ -0.58
ATF1-203ENST00000551831 ATN1P54259 1190 aaPredicted RBP11.44□□□□□ -0.58
ATF1-203ENST00000551831 TIE1P35590 1138 aa11.42□□□□□ -0.58
ATF1-203ENST00000551831 CHRM1P11229 460 aaPredicted RBP11.41□□□□□ -0.58
ATF1-203ENST00000551831 LHX8Q68G74 356 aa11.41□□□□□ -0.58
ATF1-203ENST00000551831 TTLL13PA6NNM8 815 aa11.4□□□□□ -0.58
ATF1-203ENST00000551831 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
ATF1-203ENST00000551831 C7P10643 843 aa11.35□□□□□ -0.59
ATF1-203ENST00000551831 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
ATF1-203ENST00000551831 SLC39A7Q92504 469 aa11.35□□□□□ -0.59
ATF1-203ENST00000551831 METRNQ9UJH8 293 aa11.35□□□□□ -0.59
ATF1-203ENST00000551831 TRIM35Q9UPQ4 493 aa11.33□□□□□ -0.6
ATF1-203ENST00000551831 TRIM41Q8WV44 630 aa11.3□□□□□ -0.6
ATF1-203ENST00000551831 POTEB2H3BUK9 544 aa11.29□□□□□ -0.6
ATF1-203ENST00000551831 PSEN1P49768 467 aa11.27□□□□□ -0.61
ATF1-203ENST00000551831 SEC24BO95487 1268 aa11.25□□□□□ -0.61
ATF1-203ENST00000551831 POTEFA5A3E0 1075 aa11.24□□□□□ -0.61
ATF1-203ENST00000551831 PDAP1Q13442 181 aaKnown RBP11.23□□□□□ -0.61
ATF1-203ENST00000551831 COLQQ9Y215 455 aaPredicted RBP11.23□□□□□ -0.61
ATF1-203ENST00000551831 IER5LQ5T953 404 aa11.22□□□□□ -0.61
ATF1-203ENST00000551831 ECM2O94769 699 aaPredicted RBP11.19□□□□□ -0.62
ATF1-203ENST00000551831 GOLGA2Q08379 1002 aa11.19□□□□□ -0.62
ATF1-203ENST00000551831 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
ATF1-203ENST00000551831 RIOK3O14730 519 aaKnown RBP11.18□□□□□ -0.62
ATF1-203ENST00000551831 POTEJP0CG39 1038 aa11.18□□□□□ -0.62
ATF1-203ENST00000551831 PKD2Q13563 968 aa11.18□□□□□ -0.62
ATF1-203ENST00000551831 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
ATF1-203ENST00000551831 PLCG2P16885 1265 aa11.15□□□□□ -0.62
ATF1-203ENST00000551831 IRX5P78411 483 aaPredicted RBP11.15□□□□□ -0.62
ATF1-203ENST00000551831 MKRN3Q13064 507 aaKnown RBP11.15□□□□□ -0.62
ATF1-203ENST00000551831 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
ATF1-203ENST00000551831 OCEL1Q9H607 264 aa11.13□□□□□ -0.63
ATF1-203ENST00000551831 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
ATF1-203ENST00000551831 VGFO15240 615 aaPredicted RBP11.1□□□□□ -0.63
ATF1-203ENST00000551831 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
ATF1-203ENST00000551831 MAMSTRQ6ZN01 415 aa11.09□□□□□ -0.63
ATF1-203ENST00000551831 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.09□□□□□ -0.63
ATF1-203ENST00000551831 RGL2O15211 777 aa11.08□□□□□ -0.64
ATF1-203ENST00000551831 SCUBE2Q9NQ36 999 aa11.07□□□□□ -0.64
ATF1-203ENST00000551831 EFCAB3Q8N7B9 438 aa11.05□□□□□ -0.64
ATF1-203ENST00000551831 PDCD7Q8N8D1 485 aaKnown RBP11.04□□□□□ -0.64
ATF1-203ENST00000551831 TAOK2Q9UL54 1235 aa11.04□□□□□ -0.64
ATF1-203ENST00000551831 BCL11BQ9C0K0 894 aaPredicted RBP11.01□□□□□ -0.65
ATF1-203ENST00000551831 DPY19L2Q6NUT2 758 aa11□□□□□ -0.65
ATF1-203ENST00000551831 STK24Q9Y6E0 443 aa11□□□□□ -0.65
ATF1-203ENST00000551831 STK25O00506 426 aa10.99□□□□□ -0.65
ATF1-203ENST00000551831 ILDR1Q86SU0 546 aaPredicted RBP10.97□□□□□ -0.65
ATF1-203ENST00000551831 L3MBTL3Q96JM7 780 aaPredicted RBP10.96□□□□□ -0.65
ATF1-203ENST00000551831 SOX12O15370 315 aa10.94□□□□□ -0.66
ATF1-203ENST00000551831 SLC24A1O60721 1099 aa10.94□□□□□ -0.66
ATF1-203ENST00000551831 SLAIN1Q8ND83 568 aa10.93□□□□□ -0.66
ATF1-203ENST00000551831 PHF8Q9UPP1 1060 aa10.93□□□□□ -0.66
ATF1-203ENST00000551831 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.91□□□□□ -0.66
ATF1-203ENST00000551831 G3V3G9 751 aa10.89□□□□□ -0.67
ATF1-203ENST00000551831 C3orf67Q6ZVT6 689 aa10.89□□□□□ -0.67
ATF1-203ENST00000551831 BOLA1Q9Y3E2 137 aa10.89□□□□□ -0.67
ATF1-203ENST00000551831 FAM163AQ96GL9 167 aaPredicted RBP10.87□□□□□ -0.67
ATF1-203ENST00000551831 MS4A4AQ96JQ5 239 aa10.87□□□□□ -0.67
ATF1-203ENST00000551831 NLRP6P59044 892 aa10.86□□□□□ -0.67
ATF1-203ENST00000551831 CHGAP10645 457 aaKnown RBP10.85□□□□□ -0.67
ATF1-203ENST00000551831 MFRPQ9BY79 579 aa10.84□□□□□ -0.67
ATF1-203ENST00000551831 FBXO22Q8NEZ5 403 aa10.82□□□□□ -0.68
ATF1-203ENST00000551831 DCAF8L2P0C7V8 631 aa10.81□□□□□ -0.68
ATF1-203ENST00000551831 HS6ST3Q8IZP7 471 aa10.81□□□□□ -0.68
ATF1-203ENST00000551831 TMEM121BQ9BXQ6 578 aaPredicted RBP10.8□□□□□ -0.68
ATF1-203ENST00000551831 MICALL2Q8IY33 904 aa10.79□□□□□ -0.68
ATF1-203ENST00000551831 LCE2DQ5TA82 110 aaPredicted RBP10.74□□□□□ -0.69
ATF1-203ENST00000551831 SNPHO15079 494 aa10.72□□□□□ -0.69
ATF1-203ENST00000551831 POTEMA6NI47 508 aa10.71□□□□□ -0.69
ATF1-203ENST00000551831 ST18O60284 1047 aa10.71□□□□□ -0.69
ATF1-203ENST00000551831 PPP1R37O75864 691 aa10.71□□□□□ -0.69
ATF1-203ENST00000551831 POTEGQ6S5H5 508 aa10.71□□□□□ -0.69
ATF1-203ENST00000551831 NKX1-1Q15270 411 aaPredicted RBP10.69□□□□□ -0.7
ATF1-203ENST00000551831 TMEM92Q6UXU6 159 aa10.69□□□□□ -0.7
ATF1-203ENST00000551831 PLCB2Q00722 1185 aa10.65□□□□□ -0.7
ATF1-203ENST00000551831 DNAJC5Q9H3Z4 198 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms