RNA–Protein interactions for RNA: ENST00000551604.2

CUX2-203, Transcript of cut like homeobox 2, humanhuman

TSL 5

Gene CUX2, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-203ENST00000551604 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
CUX2-203ENST00000551604 NPM1P06748 294 aaKnown RBP eCLIP11.7□□□□□ -0.54
CUX2-203ENST00000551604 HAP1P54257 671 aaPredicted RBP11.68□□□□□ -0.54
CUX2-203ENST00000551604 KLHL34Q8N239 644 aa11.65□□□□□ -0.54
CUX2-203ENST00000551604 PKD2Q13563 968 aa11.64□□□□□ -0.55
CUX2-203ENST00000551604 SPOCK2Q92563 424 aa11.62□□□□□ -0.55
CUX2-203ENST00000551604 TSPYL2Q9H2G4 693 aaPredicted RBP11.59□□□□□ -0.55
CUX2-203ENST00000551604 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.58□□□□□ -0.56
CUX2-203ENST00000551604 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
CUX2-203ENST00000551604 VSIG10Q8N0Z9 540 aa11.56□□□□□ -0.56
CUX2-203ENST00000551604 BCANQ96GW7 911 aa11.56□□□□□ -0.56
CUX2-203ENST00000551604 MS4A3Q96HJ5 214 aa11.56□□□□□ -0.56
CUX2-203ENST00000551604 POTEB2H3BUK9 544 aa11.55□□□□□ -0.56
CUX2-203ENST00000551604 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
CUX2-203ENST00000551604 PLCD3Q8N3E9 789 aa11.53□□□□□ -0.56
CUX2-203ENST00000551604 BBXQ8WY36 941 aaPredicted RBP11.51□□□□□ -0.57
CUX2-203ENST00000551604 OTUD5Q96G74 571 aa11.51□□□□□ -0.57
CUX2-203ENST00000551604 MIER1Q8N108 512 aa11.49□□□□□ -0.57
CUX2-203ENST00000551604 PLEKHG5O94827 1062 aa11.48□□□□□ -0.57
CUX2-203ENST00000551604 ATMINO43313 823 aaPredicted RBP11.46□□□□□ -0.57
CUX2-203ENST00000551604 CCDC61Q9Y6R9 512 aa11.46□□□□□ -0.57
CUX2-203ENST00000551604 ASTLQ6HA08 431 aaPredicted RBP11.45□□□□□ -0.58
CUX2-203ENST00000551604 ZBTB47Q9UFB7 747 aaPredicted RBP11.45□□□□□ -0.58
CUX2-203ENST00000551604 METRNQ9UJH8 293 aa11.44□□□□□ -0.58
CUX2-203ENST00000551604 RASEFQ8IZ41 740 aa11.41□□□□□ -0.58
CUX2-203ENST00000551604 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
CUX2-203ENST00000551604 PAXIP1Q6ZW49 1069 aaPredicted RBP11.39□□□□□ -0.59
CUX2-203ENST00000551604 SLC39A7Q92504 469 aa11.39□□□□□ -0.59
CUX2-203ENST00000551604 TRPC6Q9Y210 931 aa11.39□□□□□ -0.59
CUX2-203ENST00000551604 ATN1P54259 1190 aaPredicted RBP11.38□□□□□ -0.59
CUX2-203ENST00000551604 C7P10643 843 aa11.37□□□□□ -0.59
CUX2-203ENST00000551604 MAP3K13O43283 966 aa11.36□□□□□ -0.59
CUX2-203ENST00000551604 POTEJP0CG39 1038 aa11.36□□□□□ -0.59
CUX2-203ENST00000551604 CFAP44Q96MT7 982 aa11.36□□□□□ -0.59
CUX2-203ENST00000551604 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
CUX2-203ENST00000551604 BMP2KQ9NSY1 1161 aaPredicted RBP11.34□□□□□ -0.59
CUX2-203ENST00000551604 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
CUX2-203ENST00000551604 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
CUX2-203ENST00000551604 RGL2O15211 777 aa11.32□□□□□ -0.6
CUX2-203ENST00000551604 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
CUX2-203ENST00000551604 TAOK2Q9UL54 1235 aa11.28□□□□□ -0.6
CUX2-203ENST00000551604 POTEFA5A3E0 1075 aa11.26□□□□□ -0.61
CUX2-203ENST00000551604 POTEMA6NI47 508 aa11.26□□□□□ -0.61
CUX2-203ENST00000551604 CHGAP10645 457 aaKnown RBP11.24□□□□□ -0.61
CUX2-203ENST00000551604 TIE1P35590 1138 aa11.24□□□□□ -0.61
CUX2-203ENST00000551604 NUBP1P53384 320 aa11.24□□□□□ -0.61
CUX2-203ENST00000551604 KDM2AQ9Y2K7 1162 aa11.24□□□□□ -0.61
CUX2-203ENST00000551604 TTLL13PA6NNM8 815 aa11.23□□□□□ -0.61
CUX2-203ENST00000551604 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
CUX2-203ENST00000551604 MAMSTRQ6ZN01 415 aa11.22□□□□□ -0.61
CUX2-203ENST00000551604 PCDHB13Q9Y5F0 798 aa11.22□□□□□ -0.61
CUX2-203ENST00000551604 SCUBE2Q9NQ36 999 aa11.2□□□□□ -0.62
CUX2-203ENST00000551604 GSE1Q14687 1217 aa11.19□□□□□ -0.62
CUX2-203ENST00000551604 COLQQ9Y215 455 aaPredicted RBP11.19□□□□□ -0.62
CUX2-203ENST00000551604 SEC24BO95487 1268 aa11.18□□□□□ -0.62
CUX2-203ENST00000551604 FAM163AQ96GL9 167 aaPredicted RBP11.17□□□□□ -0.62
CUX2-203ENST00000551604 TRIM35Q9UPQ4 493 aa11.17□□□□□ -0.62
CUX2-203ENST00000551604 IFNL1Q8IU54 200 aa11.16□□□□□ -0.62
CUX2-203ENST00000551604 FAM212AQ96EL1 285 aa11.16□□□□□ -0.62
CUX2-203ENST00000551604 PRKCSHP14314 528 aaPredicted RBP11.15□□□□□ -0.62
CUX2-203ENST00000551604 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
CUX2-203ENST00000551604 TSHZ2Q9NRE2 1034 aa11.14□□□□□ -0.63
CUX2-203ENST00000551604 SGIP1Q9BQI5 828 aa11.13□□□□□ -0.63
CUX2-203ENST00000551604 TPRNQ4KMQ1 711 aa11.12□□□□□ -0.63
CUX2-203ENST00000551604 LCE2DQ5TA82 110 aaPredicted RBP11.12□□□□□ -0.63
CUX2-203ENST00000551604 TMEM106CQ9BVX2 250 aa11.1□□□□□ -0.63
CUX2-203ENST00000551604 DCAF8Q5TAQ9 597 aa11.09□□□□□ -0.63
CUX2-203ENST00000551604 PYGBP11216 843 aa11.08□□□□□ -0.64
CUX2-203ENST00000551604 NBR1Q14596 966 aa11.07□□□□□ -0.64
CUX2-203ENST00000551604 DNAJC5Q9H3Z4 198 aa11.07□□□□□ -0.64
CUX2-203ENST00000551604 IER5LQ5T953 404 aa11.06□□□□□ -0.64
CUX2-203ENST00000551604 RIOK3O14730 519 aaKnown RBP11.03□□□□□ -0.64
CUX2-203ENST00000551604 PCDHB8Q9UN66 801 aa11.01□□□□□ -0.65
CUX2-203ENST00000551604 PLCG2P16885 1265 aa11□□□□□ -0.65
CUX2-203ENST00000551604 SLAIN1Q8ND83 568 aa10.98□□□□□ -0.65
CUX2-203ENST00000551604 RNF25Q96BH1 459 aaPredicted RBP10.98□□□□□ -0.65
CUX2-203ENST00000551604 RYDENQ9NUL5 291 aaKnown RBP10.97□□□□□ -0.65
CUX2-203ENST00000551604 PCDH10Q9P2E7 1040 aa10.97□□□□□ -0.65
CUX2-203ENST00000551604 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.65
CUX2-203ENST00000551604 IRX5P78411 483 aaPredicted RBP10.96□□□□□ -0.65
CUX2-203ENST00000551604 STK25O00506 426 aa10.94□□□□□ -0.66
CUX2-203ENST00000551604 CHRM1P11229 460 aaPredicted RBP10.92□□□□□ -0.66
CUX2-203ENST00000551604 OCEL1Q9H607 264 aa10.91□□□□□ -0.66
CUX2-203ENST00000551604 GTPBP6O43824 516 aaPredicted RBP10.88□□□□□ -0.67
CUX2-203ENST00000551604 NKX1-1Q15270 411 aaPredicted RBP10.88□□□□□ -0.67
CUX2-203ENST00000551604 ST18O60284 1047 aa10.87□□□□□ -0.67
CUX2-203ENST00000551604 CDAN1Q8IWY9 1227 aa10.85□□□□□ -0.67
CUX2-203ENST00000551604 STK24Q9Y6E0 443 aa10.84□□□□□ -0.67
CUX2-203ENST00000551604 ZNF467Q7Z7K2 595 aaPredicted RBP10.82□□□□□ -0.68
CUX2-203ENST00000551604 GOLGA2Q08379 1002 aa10.81□□□□□ -0.68
CUX2-203ENST00000551604 BCL11BQ9C0K0 894 aaPredicted RBP10.81□□□□□ -0.68
CUX2-203ENST00000551604 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.81□□□□□ -0.68
CUX2-203ENST00000551604 MKRN3Q13064 507 aaKnown RBP10.8□□□□□ -0.68
CUX2-203ENST00000551604 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.79□□□□□ -0.68
CUX2-203ENST00000551604 PDCD7Q8N8D1 485 aaKnown RBP10.79□□□□□ -0.68
CUX2-203ENST00000551604 ZFP91Q96JP5 570 aaPredicted RBP10.79□□□□□ -0.68
CUX2-203ENST00000551604 PSEN1P49768 467 aa10.78□□□□□ -0.68
CUX2-203ENST00000551604 P3H3Q8IVL6 736 aa10.78□□□□□ -0.68
CUX2-203ENST00000551604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.75□□□□□ -0.69
CUX2-203ENST00000551604 C3orf67Q6ZVT6 689 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms