RNA–Protein interactions for RNA: ENST00000551280.1

LINC02258-201, Transcript of long intergenic non-protein coding RNA 2258, humanhuman

TSL 2 BASIC

Gene LINC02258, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02258-201ENST00000551280 GABBR2O75899 941 aa13.63□□□□□ -0.23
LINC02258-201ENST00000551280 TSPYL2Q9H2G4 693 aaPredicted RBP13.63□□□□□ -0.23
LINC02258-201ENST00000551280 CCDC61Q9Y6R9 512 aa13.59□□□□□ -0.23
LINC02258-201ENST00000551280 FAM212AQ96EL1 285 aa13.56□□□□□ -0.24
LINC02258-201ENST00000551280 PHF12Q96QT6 1004 aa13.56□□□□□ -0.24
LINC02258-201ENST00000551280 SPOCK2Q92563 424 aa13.53□□□□□ -0.24
LINC02258-201ENST00000551280 DCAF8Q5TAQ9 597 aa13.49□□□□□ -0.25
LINC02258-201ENST00000551280 KIF12Q96FN5 646 aa13.47□□□□□ -0.25
LINC02258-201ENST00000551280 GSE1Q14687 1217 aa13.46□□□□□ -0.25
LINC02258-201ENST00000551280 GALR2O43603 387 aaPredicted RBP13.45□□□□□ -0.26
LINC02258-201ENST00000551280 MS4A3Q96HJ5 214 aa13.41□□□□□ -0.26
LINC02258-201ENST00000551280 MAP3K13O43283 966 aa13.4□□□□□ -0.26
LINC02258-201ENST00000551280 SGIP1Q9BQI5 828 aa13.4□□□□□ -0.26
LINC02258-201ENST00000551280 DCBLD2Q96PD2 775 aa13.35□□□□□ -0.27
LINC02258-201ENST00000551280 POTEIP0CG38 1075 aa13.34□□□□□ -0.27
LINC02258-201ENST00000551280 PYGBP11216 843 aa13.34□□□□□ -0.27
LINC02258-201ENST00000551280 CIZ1Q9ULV3 898 aaPredicted RBP13.34□□□□□ -0.27
LINC02258-201ENST00000551280 CHRM1P11229 460 aaPredicted RBP13.32□□□□□ -0.28
LINC02258-201ENST00000551280 PCDHB13Q9Y5F0 798 aa13.32□□□□□ -0.28
LINC02258-201ENST00000551280 IFNL1Q8IU54 200 aa13.27□□□□□ -0.29
LINC02258-201ENST00000551280 TRIM41Q8WV44 630 aa13.25□□□□□ -0.29
LINC02258-201ENST00000551280 TIE1P35590 1138 aa13.24□□□□□ -0.29
LINC02258-201ENST00000551280 ASTLQ6HA08 431 aaPredicted RBP13.24□□□□□ -0.29
LINC02258-201ENST00000551280 TRPC6Q9Y210 931 aa13.24□□□□□ -0.29
LINC02258-201ENST00000551280 ATMINO43313 823 aaPredicted RBP13.22□□□□□ -0.29
LINC02258-201ENST00000551280 ZNF467Q7Z7K2 595 aaPredicted RBP13.2□□□□□ -0.3
LINC02258-201ENST00000551280 BMP2KQ9NSY1 1161 aaPredicted RBP13.2□□□□□ -0.3
LINC02258-201ENST00000551280 PCDHB8Q9UN66 801 aa13.18□□□□□ -0.3
LINC02258-201ENST00000551280 TTLL13PA6NNM8 815 aa13.15□□□□□ -0.3
LINC02258-201ENST00000551280 ATN1P54259 1190 aaPredicted RBP13.15□□□□□ -0.3
LINC02258-201ENST00000551280 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
LINC02258-201ENST00000551280 TMEM106CQ9BVX2 250 aa13.1□□□□□ -0.31
LINC02258-201ENST00000551280 PKD2Q13563 968 aa13.09□□□□□ -0.31
LINC02258-201ENST00000551280 SLC39A7Q92504 469 aa13.09□□□□□ -0.31
LINC02258-201ENST00000551280 SLC24A1O60721 1099 aa13.08□□□□□ -0.32
LINC02258-201ENST00000551280 C7P10643 843 aa13.06□□□□□ -0.32
LINC02258-201ENST00000551280 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
LINC02258-201ENST00000551280 PSEN1P49768 467 aa13.05□□□□□ -0.32
LINC02258-201ENST00000551280 PDAP1Q13442 181 aaKnown RBP13.05□□□□□ -0.32
LINC02258-201ENST00000551280 ECM2O94769 699 aaPredicted RBP13.04□□□□□ -0.32
LINC02258-201ENST00000551280 RNF25Q96BH1 459 aaPredicted RBP13.03□□□□□ -0.32
LINC02258-201ENST00000551280 METRNQ9UJH8 293 aa13.03□□□□□ -0.32
LINC02258-201ENST00000551280 RIOK3O14730 519 aaKnown RBP13.01□□□□□ -0.33
LINC02258-201ENST00000551280 IER5LQ5T953 404 aa13.01□□□□□ -0.33
LINC02258-201ENST00000551280 LHX8Q68G74 356 aa13□□□□□ -0.33
LINC02258-201ENST00000551280 VGFO15240 615 aaPredicted RBP12.96□□□□□ -0.33
LINC02258-201ENST00000551280 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
LINC02258-201ENST00000551280 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
LINC02258-201ENST00000551280 RGL2O15211 777 aa12.92□□□□□ -0.34
LINC02258-201ENST00000551280 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
LINC02258-201ENST00000551280 GOLGA2Q08379 1002 aa12.9□□□□□ -0.34
LINC02258-201ENST00000551280 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.89□□□□□ -0.35
LINC02258-201ENST00000551280 SEC24BO95487 1268 aa12.89□□□□□ -0.35
LINC02258-201ENST00000551280 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
LINC02258-201ENST00000551280 ZFP91Q96JP5 570 aaPredicted RBP12.89□□□□□ -0.35
LINC02258-201ENST00000551280 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
LINC02258-201ENST00000551280 MKRN3Q13064 507 aaKnown RBP12.87□□□□□ -0.35
LINC02258-201ENST00000551280 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
LINC02258-201ENST00000551280 DCAF8L2P0C7V8 631 aa12.84□□□□□ -0.35
LINC02258-201ENST00000551280 PLCG2P16885 1265 aa12.84□□□□□ -0.35
LINC02258-201ENST00000551280 OCEL1Q9H607 264 aa12.84□□□□□ -0.35
LINC02258-201ENST00000551280 ILDR1Q86SU0 546 aaPredicted RBP12.81□□□□□ -0.36
LINC02258-201ENST00000551280 POTEJP0CG39 1038 aa12.8□□□□□ -0.36
LINC02258-201ENST00000551280 BCL11BQ9C0K0 894 aaPredicted RBP12.79□□□□□ -0.36
LINC02258-201ENST00000551280 PLCB2Q00722 1185 aa12.78□□□□□ -0.36
LINC02258-201ENST00000551280 EFCAB3Q8N7B9 438 aa12.78□□□□□ -0.36
LINC02258-201ENST00000551280 PDCD7Q8N8D1 485 aaKnown RBP12.78□□□□□ -0.36
LINC02258-201ENST00000551280 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC02258-201ENST00000551280 STK25O00506 426 aa12.76□□□□□ -0.37
LINC02258-201ENST00000551280 MAMSTRQ6ZN01 415 aa12.76□□□□□ -0.37
LINC02258-201ENST00000551280 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
LINC02258-201ENST00000551280 STK24Q9Y6E0 443 aa12.75□□□□□ -0.37
LINC02258-201ENST00000551280 SOX12O15370 315 aa12.74□□□□□ -0.37
LINC02258-201ENST00000551280 BBXQ8WY36 941 aaPredicted RBP12.7□□□□□ -0.38
LINC02258-201ENST00000551280 SCUBE2Q9NQ36 999 aa12.69□□□□□ -0.38
LINC02258-201ENST00000551280 HS6ST3Q8IZP7 471 aa12.67□□□□□ -0.38
LINC02258-201ENST00000551280 L3MBTL3Q96JM7 780 aaPredicted RBP12.67□□□□□ -0.38
LINC02258-201ENST00000551280 DPY19L2Q6NUT2 758 aa12.65□□□□□ -0.38
LINC02258-201ENST00000551280 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
LINC02258-201ENST00000551280 PHF8Q9UPP1 1060 aa12.64□□□□□ -0.39
LINC02258-201ENST00000551280 CHGAP10645 457 aaKnown RBP12.62□□□□□ -0.39
LINC02258-201ENST00000551280 NLRP6P59044 892 aa12.62□□□□□ -0.39
LINC02258-201ENST00000551280 FBXO22Q8NEZ5 403 aa12.61□□□□□ -0.39
LINC02258-201ENST00000551280 MS4A4AQ96JQ5 239 aa12.61□□□□□ -0.39
LINC02258-201ENST00000551280 MFRPQ9BY79 579 aa12.61□□□□□ -0.39
LINC02258-201ENST00000551280 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
LINC02258-201ENST00000551280 BOLA1Q9Y3E2 137 aa12.58□□□□□ -0.4
LINC02258-201ENST00000551280 TMEM121BQ9BXQ6 578 aaPredicted RBP12.56□□□□□ -0.4
LINC02258-201ENST00000551280 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.56□□□□□ -0.4
LINC02258-201ENST00000551280 G3V3G9 751 aa12.55□□□□□ -0.4
LINC02258-201ENST00000551280 C3orf67Q6ZVT6 689 aa12.53□□□□□ -0.4
LINC02258-201ENST00000551280 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
LINC02258-201ENST00000551280 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
LINC02258-201ENST00000551280 MICALL2Q8IY33 904 aa12.49□□□□□ -0.41
LINC02258-201ENST00000551280 NKX1-1Q15270 411 aaPredicted RBP12.48□□□□□ -0.41
LINC02258-201ENST00000551280 SPRYD3Q8NCJ5 442 aa12.48□□□□□ -0.41
LINC02258-201ENST00000551280 PAXIP1Q6ZW49 1069 aaPredicted RBP12.47□□□□□ -0.41
LINC02258-201ENST00000551280 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
LINC02258-201ENST00000551280 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
LINC02258-201ENST00000551280 RYDENQ9NUL5 291 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms