RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 GALR2O43603 387 aaPredicted RBP16.52■□□□□ 0.24
GNPTAB-208ENST00000550718 DCBLD2Q96PD2 775 aa16.5■□□□□ 0.23
GNPTAB-208ENST00000550718 POTEIP0CG38 1075 aa16.48■□□□□ 0.23
GNPTAB-208ENST00000550718 FAM212AQ96EL1 285 aa16.46■□□□□ 0.23
GNPTAB-208ENST00000550718 KIF12Q96FN5 646 aa16.45■□□□□ 0.22
GNPTAB-208ENST00000550718 MS4A3Q96HJ5 214 aa16.41■□□□□ 0.22
GNPTAB-208ENST00000550718 KLHL34Q8N239 644 aa16.4■□□□□ 0.22
GNPTAB-208ENST00000550718 SGIP1Q9BQI5 828 aa16.38■□□□□ 0.21
GNPTAB-208ENST00000550718 MAP3K13O43283 966 aa16.34■□□□□ 0.21
GNPTAB-208ENST00000550718 IFNLR1Q8IU57 520 aaPredicted RBP16.33■□□□□ 0.2
GNPTAB-208ENST00000550718 ASTLQ6HA08 431 aaPredicted RBP16.31■□□□□ 0.2
GNPTAB-208ENST00000550718 DCAF8Q5TAQ9 597 aa16.3■□□□□ 0.2
GNPTAB-208ENST00000550718 GSE1Q14687 1217 aa16.28■□□□□ 0.2
GNPTAB-208ENST00000550718 SPOCK2Q92563 424 aa16.26■□□□□ 0.19
GNPTAB-208ENST00000550718 PCDHB13Q9Y5F0 798 aa16.24■□□□□ 0.19
GNPTAB-208ENST00000550718 ATMINO43313 823 aaPredicted RBP16.23■□□□□ 0.19
GNPTAB-208ENST00000550718 TIE1P35590 1138 aa16.22■□□□□ 0.19
GNPTAB-208ENST00000550718 LHX8Q68G74 356 aa16.21■□□□□ 0.19
GNPTAB-208ENST00000550718 CHRM1P11229 460 aaPredicted RBP16.16■□□□□ 0.18
GNPTAB-208ENST00000550718 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
GNPTAB-208ENST00000550718 BMP2KQ9NSY1 1161 aaPredicted RBP16.16■□□□□ 0.18
GNPTAB-208ENST00000550718 IFNL1Q8IU54 200 aa16.15■□□□□ 0.18
GNPTAB-208ENST00000550718 PYGBP11216 843 aa16.14■□□□□ 0.17
GNPTAB-208ENST00000550718 SLC39A7Q92504 469 aa16.14■□□□□ 0.17
GNPTAB-208ENST00000550718 TRPC6Q9Y210 931 aa16.14■□□□□ 0.17
GNPTAB-208ENST00000550718 C7P10643 843 aa16.13■□□□□ 0.17
GNPTAB-208ENST00000550718 ATN1P54259 1190 aaPredicted RBP16.12■□□□□ 0.17
GNPTAB-208ENST00000550718 TTLL13PA6NNM8 815 aa16.09■□□□□ 0.17
GNPTAB-208ENST00000550718 METRNQ9UJH8 293 aa16.05■□□□□ 0.16
GNPTAB-208ENST00000550718 ZNF467Q7Z7K2 595 aaPredicted RBP16.04■□□□□ 0.16
GNPTAB-208ENST00000550718 CIZ1Q9ULV3 898 aaPredicted RBP16.02■□□□□ 0.16
GNPTAB-208ENST00000550718 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
GNPTAB-208ENST00000550718 IER5LQ5T953 404 aa15.99■□□□□ 0.15
GNPTAB-208ENST00000550718 TMEM106CQ9BVX2 250 aa15.98■□□□□ 0.15
GNPTAB-208ENST00000550718 PCDHB8Q9UN66 801 aa15.97■□□□□ 0.15
GNPTAB-208ENST00000550718 TRIM35Q9UPQ4 493 aa15.97■□□□□ 0.15
GNPTAB-208ENST00000550718 POTEB2H3BUK9 544 aa15.94■□□□□ 0.14
GNPTAB-208ENST00000550718 POTEFA5A3E0 1075 aa15.87■□□□□ 0.13
GNPTAB-208ENST00000550718 SEC24BO95487 1268 aa15.83■□□□□ 0.12
GNPTAB-208ENST00000550718 PDAP1Q13442 181 aaKnown RBP15.83■□□□□ 0.12
GNPTAB-208ENST00000550718 OTUD5Q96G74 571 aa15.83■□□□□ 0.12
GNPTAB-208ENST00000550718 MAMSTRQ6ZN01 415 aa15.82■□□□□ 0.12
GNPTAB-208ENST00000550718 PSEN1P49768 467 aa15.81■□□□□ 0.12
GNPTAB-208ENST00000550718 COLQQ9Y215 455 aaPredicted RBP15.81■□□□□ 0.12
GNPTAB-208ENST00000550718 POTEJP0CG39 1038 aa15.78■□□□□ 0.12
GNPTAB-208ENST00000550718 IRX5P78411 483 aaPredicted RBP15.77■□□□□ 0.12
GNPTAB-208ENST00000550718 PLCG2P16885 1265 aa15.73■□□□□ 0.11
GNPTAB-208ENST00000550718 OCEL1Q9H607 264 aa15.72■□□□□ 0.11
GNPTAB-208ENST00000550718 GOLGA2Q08379 1002 aa15.71■□□□□ 0.11
GNPTAB-208ENST00000550718 SCUBE2Q9NQ36 999 aa15.71■□□□□ 0.11
GNPTAB-208ENST00000550718 MKRN3Q13064 507 aaKnown RBP15.69■□□□□ 0.1
GNPTAB-208ENST00000550718 RIOK3O14730 519 aaKnown RBP15.68■□□□□ 0.1
GNPTAB-208ENST00000550718 RNF25Q96BH1 459 aaPredicted RBP15.65■□□□□ 0.1
GNPTAB-208ENST00000550718 VGFO15240 615 aaPredicted RBP15.62■□□□□ 0.09
GNPTAB-208ENST00000550718 ILDR1Q86SU0 546 aaPredicted RBP15.62■□□□□ 0.09
GNPTAB-208ENST00000550718 TAOK2Q9UL54 1235 aa15.6■□□□□ 0.09
GNPTAB-208ENST00000550718 PDCD7Q8N8D1 485 aaKnown RBP15.59■□□□□ 0.09
GNPTAB-208ENST00000550718 CABP2Q9NPB3 220 aa15.59■□□□□ 0.09
GNPTAB-208ENST00000550718 PKD2Q13563 968 aa15.58■□□□□ 0.08
GNPTAB-208ENST00000550718 ECM2O94769 699 aaPredicted RBP15.56■□□□□ 0.08
GNPTAB-208ENST00000550718 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.56■□□□□ 0.08
GNPTAB-208ENST00000550718 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.51■□□□□ 0.07
GNPTAB-208ENST00000550718 L3MBTL3Q96JM7 780 aaPredicted RBP15.51■□□□□ 0.07
GNPTAB-208ENST00000550718 ZFP91Q96JP5 570 aaPredicted RBP15.51■□□□□ 0.07
GNPTAB-208ENST00000550718 EFCAB3Q8N7B9 438 aa15.46■□□□□ 0.07
GNPTAB-208ENST00000550718 SOX12O15370 315 aa15.45■□□□□ 0.06
GNPTAB-208ENST00000550718 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.42■□□□□ 0.06
GNPTAB-208ENST00000550718 SLAIN1Q8ND83 568 aa15.41■□□□□ 0.06
GNPTAB-208ENST00000550718 PLSCR2Q9NRY7 297 aa15.41■□□□□ 0.06
GNPTAB-208ENST00000550718 RGL2O15211 777 aa15.4■□□□□ 0.06
GNPTAB-208ENST00000550718 BCL11BQ9C0K0 894 aaPredicted RBP15.38■□□□□ 0.05
GNPTAB-208ENST00000550718 C3orf67Q6ZVT6 689 aa15.36■□□□□ 0.05
GNPTAB-208ENST00000550718 DPY19L2Q6NUT2 758 aa15.35■□□□□ 0.05
GNPTAB-208ENST00000550718 BOLA1Q9Y3E2 137 aa15.34■□□□□ 0.05
GNPTAB-208ENST00000550718 STK25O00506 426 aa15.33■□□□□ 0.04
GNPTAB-208ENST00000550718 STK24Q9Y6E0 443 aa15.32■□□□□ 0.04
GNPTAB-208ENST00000550718 G3V3G9 751 aa15.31■□□□□ 0.04
GNPTAB-208ENST00000550718 TMEM121BQ9BXQ6 578 aaPredicted RBP15.31■□□□□ 0.04
GNPTAB-208ENST00000550718 NLRP6P59044 892 aa15.27■□□□□ 0.04
GNPTAB-208ENST00000550718 SNPHO15079 494 aa15.26■□□□□ 0.03
GNPTAB-208ENST00000550718 LCE2DQ5TA82 110 aaPredicted RBP15.26■□□□□ 0.03
GNPTAB-208ENST00000550718 MS4A4AQ96JQ5 239 aa15.26■□□□□ 0.03
GNPTAB-208ENST00000550718 PHF8Q9UPP1 1060 aa15.26■□□□□ 0.03
GNPTAB-208ENST00000550718 FAM163AQ96GL9 167 aaPredicted RBP15.25■□□□□ 0.03
GNPTAB-208ENST00000550718 FBXO22Q8NEZ5 403 aa15.23■□□□□ 0.03
GNPTAB-208ENST00000550718 POTEMA6NI47 508 aa15.21■□□□□ 0.03
GNPTAB-208ENST00000550718 MFRPQ9BY79 579 aa15.2■□□□□ 0.02
GNPTAB-208ENST00000550718 POTEGQ6S5H5 508 aa15.19■□□□□ 0.02
GNPTAB-208ENST00000550718 MICALL2Q8IY33 904 aa15.18■□□□□ 0.02
GNPTAB-208ENST00000550718 HS6ST3Q8IZP7 471 aa15.17■□□□□ 0.02
GNPTAB-208ENST00000550718 ST18O60284 1047 aa15.13■□□□□ 0.01
GNPTAB-208ENST00000550718 PCDH10Q9P2E7 1040 aa15.12■□□□□ 0.01
GNPTAB-208ENST00000550718 DNAJC5Q9H3Z4 198 aa15.11■□□□□ 0.01
GNPTAB-208ENST00000550718 CHGAP10645 457 aaKnown RBP15.04■□□□□ -0
GNPTAB-208ENST00000550718 TMEM92Q6UXU6 159 aa15.02■□□□□ -0
GNPTAB-208ENST00000550718 HOXB3P14651 431 aaPredicted RBP14.98□□□□□ -0.01
GNPTAB-208ENST00000550718 DOK7Q18PE1 504 aa14.97□□□□□ -0.01
GNPTAB-208ENST00000550718 RYDENQ9NUL5 291 aaKnown RBP14.96□□□□□ -0.01
GNPTAB-208ENST00000550718 KIF3CO14782 793 aa14.9□□□□□ -0.02
GNPTAB-208ENST00000550718 RIMBP2O15034 1052 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms