RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 TSPYL2Q9H2G4 693 aaPredicted RBP10.63□□□□□ -0.71
CPNE8-206ENST00000549842 CCDC61Q9Y6R9 512 aa10.63□□□□□ -0.71
CPNE8-206ENST00000549842 DCAF8Q5TAQ9 597 aa10.62□□□□□ -0.71
CPNE8-206ENST00000549842 TRIM41Q8WV44 630 aa10.6□□□□□ -0.71
CPNE8-206ENST00000549842 CHRM1P11229 460 aaPredicted RBP10.59□□□□□ -0.71
CPNE8-206ENST00000549842 AMER1Q5JTC6 1135 aaPredicted RBP10.59□□□□□ -0.71
CPNE8-206ENST00000549842 SP7Q8TDD2 431 aaPredicted RBP10.56□□□□□ -0.72
CPNE8-206ENST00000549842 SGIP1Q9BQI5 828 aa10.55□□□□□ -0.72
CPNE8-206ENST00000549842 CIZ1Q9ULV3 898 aaPredicted RBP10.55□□□□□ -0.72
CPNE8-206ENST00000549842 KIF12Q96FN5 646 aa10.53□□□□□ -0.72
CPNE8-206ENST00000549842 RTN4Q9NQC3 1192 aaKnown RBP10.53□□□□□ -0.72
CPNE8-206ENST00000549842 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
CPNE8-206ENST00000549842 PKD2Q13563 968 aa10.5□□□□□ -0.73
CPNE8-206ENST00000549842 SLC24A1O60721 1099 aa10.49□□□□□ -0.73
CPNE8-206ENST00000549842 GABBR2O75899 941 aa10.48□□□□□ -0.73
CPNE8-206ENST00000549842 MAP3K13O43283 966 aa10.46□□□□□ -0.73
CPNE8-206ENST00000549842 PYGBP11216 843 aa10.46□□□□□ -0.73
CPNE8-206ENST00000549842 ZNF467Q7Z7K2 595 aaPredicted RBP10.42□□□□□ -0.74
CPNE8-206ENST00000549842 PCDHB13Q9Y5F0 798 aa10.42□□□□□ -0.74
CPNE8-206ENST00000549842 ECM2O94769 699 aaPredicted RBP10.41□□□□□ -0.74
CPNE8-206ENST00000549842 MS4A3Q96HJ5 214 aa10.41□□□□□ -0.74
CPNE8-206ENST00000549842 GALR2O43603 387 aaPredicted RBP10.39□□□□□ -0.75
CPNE8-206ENST00000549842 IFNL1Q8IU54 200 aa10.39□□□□□ -0.75
CPNE8-206ENST00000549842 RIOK3O14730 519 aaKnown RBP10.34□□□□□ -0.75
CPNE8-206ENST00000549842 TIE1P35590 1138 aa10.34□□□□□ -0.75
CPNE8-206ENST00000549842 TAOK2Q9UL54 1235 aa10.34□□□□□ -0.75
CPNE8-206ENST00000549842 RNF25Q96BH1 459 aaPredicted RBP10.33□□□□□ -0.76
CPNE8-206ENST00000549842 PCDHB8Q9UN66 801 aa10.33□□□□□ -0.76
CPNE8-206ENST00000549842 RGL2O15211 777 aa10.31□□□□□ -0.76
CPNE8-206ENST00000549842 PDAP1Q13442 181 aaKnown RBP10.31□□□□□ -0.76
CPNE8-206ENST00000549842 VGFO15240 615 aaPredicted RBP10.3□□□□□ -0.76
CPNE8-206ENST00000549842 ASTLQ6HA08 431 aaPredicted RBP10.29□□□□□ -0.76
CPNE8-206ENST00000549842 DCBLD2Q96PD2 775 aa10.29□□□□□ -0.76
CPNE8-206ENST00000549842 PSEN1P49768 467 aa10.28□□□□□ -0.76
CPNE8-206ENST00000549842 TRPC6Q9Y210 931 aa10.28□□□□□ -0.76
CPNE8-206ENST00000549842 BMP2KQ9NSY1 1161 aaPredicted RBP10.27□□□□□ -0.77
CPNE8-206ENST00000549842 ATMINO43313 823 aaPredicted RBP10.26□□□□□ -0.77
CPNE8-206ENST00000549842 TTLL13PA6NNM8 815 aa10.25□□□□□ -0.77
CPNE8-206ENST00000549842 POTEIP0CG38 1075 aa10.25□□□□□ -0.77
CPNE8-206ENST00000549842 TMEM106CQ9BVX2 250 aa10.24□□□□□ -0.77
CPNE8-206ENST00000549842 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.2□□□□□ -0.78
CPNE8-206ENST00000549842 ATN1P54259 1190 aaPredicted RBP10.2□□□□□ -0.78
CPNE8-206ENST00000549842 ZFP91Q96JP5 570 aaPredicted RBP10.2□□□□□ -0.78
CPNE8-206ENST00000549842 IER5LQ5T953 404 aa10.17□□□□□ -0.78
CPNE8-206ENST00000549842 PELP1Q8IZL8 1130 aaKnown RBP10.16□□□□□ -0.78
CPNE8-206ENST00000549842 SLC39A7Q92504 469 aa10.16□□□□□ -0.78
CPNE8-206ENST00000549842 TRIM35Q9UPQ4 493 aa10.16□□□□□ -0.78
CPNE8-206ENST00000549842 C7P10643 843 aa10.15□□□□□ -0.78
CPNE8-206ENST00000549842 HS6ST3Q8IZP7 471 aa10.15□□□□□ -0.78
CPNE8-206ENST00000549842 DNAJC5Q9H3Z4 198 aa10.15□□□□□ -0.78
CPNE8-206ENST00000549842 STK25O00506 426 aa10.13□□□□□ -0.79
CPNE8-206ENST00000549842 BCL11BQ9C0K0 894 aaPredicted RBP10.13□□□□□ -0.79
CPNE8-206ENST00000549842 CABP2Q9NPB3 220 aa10.11□□□□□ -0.79
CPNE8-206ENST00000549842 SOX12O15370 315 aa10.1□□□□□ -0.79
CPNE8-206ENST00000549842 GOLGA2Q08379 1002 aa10.1□□□□□ -0.79
CPNE8-206ENST00000549842 STK24Q9Y6E0 443 aa10.1□□□□□ -0.79
CPNE8-206ENST00000549842 CHGAP10645 457 aaKnown RBP10.09□□□□□ -0.79
CPNE8-206ENST00000549842 MKRN3Q13064 507 aaKnown RBP10.09□□□□□ -0.79
CPNE8-206ENST00000549842 ILDR1Q86SU0 546 aaPredicted RBP10.09□□□□□ -0.79
CPNE8-206ENST00000549842 DCAF8L2P0C7V8 631 aa10.06□□□□□ -0.8
CPNE8-206ENST00000549842 IRX5P78411 483 aaPredicted RBP10.06□□□□□ -0.8
CPNE8-206ENST00000549842 EFCAB3Q8N7B9 438 aa10.06□□□□□ -0.8
CPNE8-206ENST00000549842 METRNQ9UJH8 293 aa10.06□□□□□ -0.8
CPNE8-206ENST00000549842 OCEL1Q9H607 264 aa10.04□□□□□ -0.8
CPNE8-206ENST00000549842 POTEFA5A3E0 1075 aa10.02□□□□□ -0.81
CPNE8-206ENST00000549842 SEC24BO95487 1268 aa10.01□□□□□ -0.81
CPNE8-206ENST00000549842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.01□□□□□ -0.81
CPNE8-206ENST00000549842 PLCG2P16885 1265 aa10□□□□□ -0.81
CPNE8-206ENST00000549842 NLRP6P59044 892 aa10□□□□□ -0.81
CPNE8-206ENST00000549842 BBXQ8WY36 941 aaPredicted RBP10□□□□□ -0.81
CPNE8-206ENST00000549842 COLQQ9Y215 455 aaPredicted RBP10□□□□□ -0.81
CPNE8-206ENST00000549842 PDCD7Q8N8D1 485 aaKnown RBP9.99□□□□□ -0.81
CPNE8-206ENST00000549842 FBXO22Q8NEZ5 403 aa9.98□□□□□ -0.81
CPNE8-206ENST00000549842 MFRPQ9BY79 579 aa9.98□□□□□ -0.81
CPNE8-206ENST00000549842 RYDENQ9NUL5 291 aaKnown RBP9.98□□□□□ -0.81
CPNE8-206ENST00000549842 NKX1-1Q15270 411 aaPredicted RBP9.97□□□□□ -0.81
CPNE8-206ENST00000549842 PHF8Q9UPP1 1060 aa9.96□□□□□ -0.82
CPNE8-206ENST00000549842 L3MBTL3Q96JM7 780 aaPredicted RBP9.93□□□□□ -0.82
CPNE8-206ENST00000549842 MS4A4AQ96JQ5 239 aa9.93□□□□□ -0.82
CPNE8-206ENST00000549842 POTEB2H3BUK9 544 aa9.91□□□□□ -0.82
CPNE8-206ENST00000549842 GTPBP6O43824 516 aaPredicted RBP9.9□□□□□ -0.82
CPNE8-206ENST00000549842 LHX8Q68G74 356 aa9.9□□□□□ -0.82
CPNE8-206ENST00000549842 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.9□□□□□ -0.82
CPNE8-206ENST00000549842 MAMSTRQ6ZN01 415 aa9.89□□□□□ -0.83
CPNE8-206ENST00000549842 DPY19L2Q6NUT2 758 aa9.88□□□□□ -0.83
CPNE8-206ENST00000549842 TMEM121BQ9BXQ6 578 aaPredicted RBP9.88□□□□□ -0.83
CPNE8-206ENST00000549842 POTEJP0CG39 1038 aa9.86□□□□□ -0.83
CPNE8-206ENST00000549842 BOLA1Q9Y3E2 137 aa9.85□□□□□ -0.83
CPNE8-206ENST00000549842 SPRYD3Q8NCJ5 442 aa9.84□□□□□ -0.83
CPNE8-206ENST00000549842 G3V3G9 751 aa9.82□□□□□ -0.84
CPNE8-206ENST00000549842 PPP1R37O75864 691 aa9.81□□□□□ -0.84
CPNE8-206ENST00000549842 MICALL2Q8IY33 904 aa9.81□□□□□ -0.84
CPNE8-206ENST00000549842 SCUBE2Q9NQ36 999 aa9.8□□□□□ -0.84
CPNE8-206ENST00000549842 OTUD5Q96G74 571 aa9.78□□□□□ -0.84
CPNE8-206ENST00000549842 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.77□□□□□ -0.85
CPNE8-206ENST00000549842 C3orf67Q6ZVT6 689 aa9.76□□□□□ -0.85
CPNE8-206ENST00000549842 PAXIP1Q6ZW49 1069 aaPredicted RBP9.76□□□□□ -0.85
CPNE8-206ENST00000549842 PLCB2Q00722 1185 aa9.74□□□□□ -0.85
CPNE8-206ENST00000549842 CFAP44Q96MT7 982 aa9.73□□□□□ -0.85
CPNE8-206ENST00000549842 SLAIN1Q8ND83 568 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms