RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 NBR1Q14596 966 aa19.1■□□□□ 0.65
PRIM1-204ENST00000549549 NKX1-1Q15270 411 aaPredicted RBP19.1■□□□□ 0.65
PRIM1-204ENST00000549549 RIOK3O14730 519 aaKnown RBP19.09■□□□□ 0.65
PRIM1-204ENST00000549549 GTPBP6O43824 516 aaPredicted RBP19.05■□□□□ 0.64
PRIM1-204ENST00000549549 DCAF8Q5TAQ9 597 aa19.03■□□□□ 0.64
PRIM1-204ENST00000549549 CHRM1P11229 460 aaPredicted RBP18.97■□□□□ 0.63
PRIM1-204ENST00000549549 VGFO15240 615 aaPredicted RBP18.95■□□□□ 0.62
PRIM1-204ENST00000549549 SPDYE1Q8NFV5 336 aaPredicted RBP18.95■□□□□ 0.62
PRIM1-204ENST00000549549 FAM212AQ96EL1 285 aa18.92■□□□□ 0.62
PRIM1-204ENST00000549549 SGIP1Q9BQI5 828 aa18.92■□□□□ 0.62
PRIM1-204ENST00000549549 MNX1P50219 401 aaPredicted RBP18.91■□□□□ 0.62
PRIM1-204ENST00000549549 CREBZFQ9NS37 354 aa18.91■□□□□ 0.62
PRIM1-204ENST00000549549 STK25O00506 426 aa18.89■□□□□ 0.61
PRIM1-204ENST00000549549 AKT1S1Q96B36 256 aa18.84■□□□□ 0.61
PRIM1-204ENST00000549549 PRR29P0C7W0 189 aa18.8■□□□□ 0.6
PRIM1-204ENST00000549549 CACNB1Q02641 598 aaPredicted RBP18.8■□□□□ 0.6
PRIM1-204ENST00000549549 RYDENQ9NUL5 291 aaKnown RBP18.78■□□□□ 0.6
PRIM1-204ENST00000549549 RASEFQ8IZ41 740 aa18.77■□□□□ 0.6
PRIM1-204ENST00000549549 RBM42Q9BTD8 480 aaKnown RBP18.76■□□□□ 0.59
PRIM1-204ENST00000549549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.74■□□□□ 0.59
PRIM1-204ENST00000549549 ZFP91Q96JP5 570 aaPredicted RBP18.74■□□□□ 0.59
PRIM1-204ENST00000549549 BCL11BQ9C0K0 894 aaPredicted RBP18.74■□□□□ 0.59
PRIM1-204ENST00000549549 CLEC11AQ9Y240 323 aa18.73■□□□□ 0.59
PRIM1-204ENST00000549549 STK24Q9Y6E0 443 aa18.72■□□□□ 0.59
PRIM1-204ENST00000549549 REM2Q8IYK8 340 aaPredicted RBP18.65■□□□□ 0.58
PRIM1-204ENST00000549549 PYGBP11216 843 aa18.61■□□□□ 0.57
PRIM1-204ENST00000549549 P3H3Q8IVL6 736 aa18.54■□□□□ 0.56
PRIM1-204ENST00000549549 GTF3C3Q9Y5Q9 886 aa18.45■□□□□ 0.54
PRIM1-204ENST00000549549 ZNF467Q7Z7K2 595 aaPredicted RBP18.42■□□□□ 0.54
PRIM1-204ENST00000549549 TIMELESSQ9UNS1 1208 aa18.42■□□□□ 0.54
PRIM1-204ENST00000549549 PITPNM1O00562 1244 aa18.4■□□□□ 0.54
PRIM1-204ENST00000549549 CADPS2Q86UW7 1296 aa18.4■□□□□ 0.54
PRIM1-204ENST00000549549 TULP1O00294 542 aaPredicted RBP18.38■□□□□ 0.53
PRIM1-204ENST00000549549 TMEM132AQ24JP5 1023 aa18.38■□□□□ 0.53
PRIM1-204ENST00000549549 WDR70Q9NW82 654 aa18.37■□□□□ 0.53
PRIM1-204ENST00000549549 KCNV2Q8TDN2 545 aa18.36■□□□□ 0.53
PRIM1-204ENST00000549549 PDAP1Q13442 181 aaKnown RBP18.35■□□□□ 0.53
PRIM1-204ENST00000549549 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.34■□□□□ 0.53
PRIM1-204ENST00000549549 ERICH6Q7L0X2 663 aa18.3■□□□□ 0.52
PRIM1-204ENST00000549549 LMOD2Q6P5Q4 547 aa18.27■□□□□ 0.52
PRIM1-204ENST00000549549 TSPYL2Q9H2G4 693 aaPredicted RBP18.27■□□□□ 0.52
PRIM1-204ENST00000549549 MFRPQ9BY79 579 aa18.25■□□□□ 0.51
PRIM1-204ENST00000549549 PCDHB8Q9UN66 801 aa18.23■□□□□ 0.51
PRIM1-204ENST00000549549 PCDHB13Q9Y5F0 798 aa18.23■□□□□ 0.51
PRIM1-204ENST00000549549 ZNF579Q8NAF0 562 aaKnown RBP18.2■□□□□ 0.5
PRIM1-204ENST00000549549 FARP1Q9Y4F1 1045 aaPredicted RBP18.2■□□□□ 0.5
PRIM1-204ENST00000549549 PSEN1P49768 467 aa18.19■□□□□ 0.5
PRIM1-204ENST00000549549 CHADLQ6NUI6 762 aa18.18■□□□□ 0.5
PRIM1-204ENST00000549549 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
PRIM1-204ENST00000549549 ARHGEF1Q92888 912 aaKnown RBP18.16■□□□□ 0.5
PRIM1-204ENST00000549549 PPP1R37O75864 691 aa18.09■□□□□ 0.49
PRIM1-204ENST00000549549 FBXO22Q8NEZ5 403 aa18.08■□□□□ 0.48
PRIM1-204ENST00000549549 E2F4Q16254 413 aa18.05■□□□□ 0.48
PRIM1-204ENST00000549549 SOX12O15370 315 aa18.04■□□□□ 0.48
PRIM1-204ENST00000549549 NLRP6P59044 892 aa18.04■□□□□ 0.48
PRIM1-204ENST00000549549 BRPF1P55201 1214 aaPredicted RBP18.01■□□□□ 0.47
PRIM1-204ENST00000549549 ZC3H15Q8WU90 426 aaKnown RBP18.01■□□□□ 0.47
PRIM1-204ENST00000549549 TESPA1A2RU30 521 aaPredicted RBP18■□□□□ 0.47
PRIM1-204ENST00000549549 EFCAB3Q8N7B9 438 aa18■□□□□ 0.47
PRIM1-204ENST00000549549 IFNL1Q8IU54 200 aa17.99■□□□□ 0.47
PRIM1-204ENST00000549549 PHF8Q9UPP1 1060 aa17.95■□□□□ 0.46
PRIM1-204ENST00000549549 SEMA3EO15041 775 aa17.93■□□□□ 0.46
PRIM1-204ENST00000549549 PRKAR2AP13861 404 aaKnown RBP17.93■□□□□ 0.46
PRIM1-204ENST00000549549 CABP2Q9NPB3 220 aa17.93■□□□□ 0.46
PRIM1-204ENST00000549549 KIF12Q96FN5 646 aa17.91■□□□□ 0.46
PRIM1-204ENST00000549549 ARXQ96QS3 562 aa17.91■□□□□ 0.46
PRIM1-204ENST00000549549 MAP3K13O43283 966 aa17.9■□□□□ 0.46
PRIM1-204ENST00000549549 NCKAP5LQ9HCH0 1330 aa17.88■□□□□ 0.45
PRIM1-204ENST00000549549 PAK3O75914 559 aaPredicted RBP17.87■□□□□ 0.45
PRIM1-204ENST00000549549 FXR2P51116 673 aaKnown RBP eCLIP17.87■□□□□ 0.45
PRIM1-204ENST00000549549 C14orf37Q86TY3 774 aa17.87■□□□□ 0.45
PRIM1-204ENST00000549549 ARIH1Q9Y4X5 557 aaPredicted RBP17.86■□□□□ 0.45
PRIM1-204ENST00000549549 MFSD10Q14728 455 aa17.85■□□□□ 0.45
PRIM1-204ENST00000549549 PDE4AP27815 886 aa17.83■□□□□ 0.44
PRIM1-204ENST00000549549 SLC24A3Q9HC58 644 aa17.83■□□□□ 0.44
PRIM1-204ENST00000549549 ZMYND10O75800 440 aa17.8■□□□□ 0.44
PRIM1-204ENST00000549549 LARP6Q9BRS8 491 aaKnown RBP17.8■□□□□ 0.44
PRIM1-204ENST00000549549 SMYD5Q6GMV2 418 aa17.79■□□□□ 0.44
PRIM1-204ENST00000549549 NEUROD2Q15784 382 aa17.78■□□□□ 0.44
PRIM1-204ENST00000549549 MS4A4AQ96JQ5 239 aa17.78■□□□□ 0.44
PRIM1-204ENST00000549549 CRISPLD2Q9H0B8 497 aa17.78■□□□□ 0.44
PRIM1-204ENST00000549549 CAMK2BQ13554 666 aa17.73■□□□□ 0.43
PRIM1-204ENST00000549549 DDX27Q96GQ7 796 aaKnown RBP17.7■□□□□ 0.42
PRIM1-204ENST00000549549 BARGINQ6ZT62 677 aa17.68■□□□□ 0.42
PRIM1-204ENST00000549549 PIP4P2Q8N4L2 257 aa17.57■□□□□ 0.4
PRIM1-204ENST00000549549 ZRANB1Q9UGI0 708 aa17.57■□□□□ 0.4
PRIM1-204ENST00000549549 GOLGA2Q08379 1002 aa17.54■□□□□ 0.4
PRIM1-204ENST00000549549 AK7Q96M32 723 aa17.54■□□□□ 0.4
PRIM1-204ENST00000549549 TMEM106CQ9BVX2 250 aa17.54■□□□□ 0.4
PRIM1-204ENST00000549549 HOMEZQ8IX15 550 aa17.53■□□□□ 0.4
PRIM1-204ENST00000549549 PHF12Q96QT6 1004 aa17.53■□□□□ 0.4
PRIM1-204ENST00000549549 ILDR1Q86SU0 546 aaPredicted RBP17.49■□□□□ 0.39
PRIM1-204ENST00000549549 CD44P16070 742 aaKnown RBP17.48■□□□□ 0.39
PRIM1-204ENST00000549549 MLLT3P42568 568 aaPredicted RBP17.48■□□□□ 0.39
PRIM1-204ENST00000549549 RBM26Q5T8P6 1007 aaKnown RBP17.48■□□□□ 0.39
PRIM1-204ENST00000549549 CHRDL2Q6WN34 429 aa17.48■□□□□ 0.39
PRIM1-204ENST00000549549 DAXXQ9UER7 740 aaPredicted RBP17.48■□□□□ 0.39
PRIM1-204ENST00000549549 MKRN3Q13064 507 aaKnown RBP17.47■□□□□ 0.39
PRIM1-204ENST00000549549 GPHNQ9NQX3 736 aaPredicted RBP17.47■□□□□ 0.39
PRIM1-204ENST00000549549 GPIHBP1Q8IV16 184 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms