RNA–Protein interactions for RNA: ENST00000549454.5

SYT1-206, Transcript of synaptotagmin 1, humanhuman

TSL 5

Gene SYT1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-206ENST00000549454 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
SYT1-206ENST00000549454 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
SYT1-206ENST00000549454 DCAF8Q5TAQ9 597 aa13.37□□□□□ -0.27
SYT1-206ENST00000549454 GALR2O43603 387 aaPredicted RBP13.36□□□□□ -0.27
SYT1-206ENST00000549454 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
SYT1-206ENST00000549454 CLCN6P51797 869 aa13.33□□□□□ -0.28
SYT1-206ENST00000549454 MS4A3Q96HJ5 214 aa13.31□□□□□ -0.28
SYT1-206ENST00000549454 KIF12Q96FN5 646 aa13.3□□□□□ -0.28
SYT1-206ENST00000549454 MAP3K13O43283 966 aa13.28□□□□□ -0.28
SYT1-206ENST00000549454 CIZ1Q9ULV3 898 aaPredicted RBP13.27□□□□□ -0.29
SYT1-206ENST00000549454 PYGBP11216 843 aa13.26□□□□□ -0.29
SYT1-206ENST00000549454 GSE1Q14687 1217 aa13.26□□□□□ -0.29
SYT1-206ENST00000549454 DCBLD2Q96PD2 775 aa13.26□□□□□ -0.29
SYT1-206ENST00000549454 PCDHB13Q9Y5F0 798 aa13.22□□□□□ -0.29
SYT1-206ENST00000549454 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
SYT1-206ENST00000549454 TRPC6Q9Y210 931 aa13.18□□□□□ -0.3
SYT1-206ENST00000549454 IFNL1Q8IU54 200 aa13.15□□□□□ -0.3
SYT1-206ENST00000549454 SGIP1Q9BQI5 828 aa13.12□□□□□ -0.31
SYT1-206ENST00000549454 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
SYT1-206ENST00000549454 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.32
SYT1-206ENST00000549454 ATMINO43313 823 aaPredicted RBP13.07□□□□□ -0.32
SYT1-206ENST00000549454 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
SYT1-206ENST00000549454 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
SYT1-206ENST00000549454 TIE1P35590 1138 aa13.04□□□□□ -0.32
SYT1-206ENST00000549454 ATN1P54259 1190 aaPredicted RBP13.04□□□□□ -0.32
SYT1-206ENST00000549454 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
SYT1-206ENST00000549454 TTLL13PA6NNM8 815 aa13.02□□□□□ -0.33
SYT1-206ENST00000549454 ZNF467Q7Z7K2 595 aaPredicted RBP13.02□□□□□ -0.33
SYT1-206ENST00000549454 TMEM106CQ9BVX2 250 aa13.01□□□□□ -0.33
SYT1-206ENST00000549454 TRIM41Q8WV44 630 aa12.99□□□□□ -0.33
SYT1-206ENST00000549454 TRIM35Q9UPQ4 493 aa12.96□□□□□ -0.33
SYT1-206ENST00000549454 METRNQ9UJH8 293 aa12.94□□□□□ -0.34
SYT1-206ENST00000549454 ECM2O94769 699 aaPredicted RBP12.93□□□□□ -0.34
SYT1-206ENST00000549454 SLC39A7Q92504 469 aa12.92□□□□□ -0.34
SYT1-206ENST00000549454 PSEN1P49768 467 aa12.91□□□□□ -0.34
SYT1-206ENST00000549454 PKD2Q13563 968 aa12.91□□□□□ -0.34
SYT1-206ENST00000549454 RNF25Q96BH1 459 aaPredicted RBP12.91□□□□□ -0.34
SYT1-206ENST00000549454 PDAP1Q13442 181 aaKnown RBP12.89□□□□□ -0.35
SYT1-206ENST00000549454 C7P10643 843 aa12.88□□□□□ -0.35
SYT1-206ENST00000549454 LHX8Q68G74 356 aa12.88□□□□□ -0.35
SYT1-206ENST00000549454 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
SYT1-206ENST00000549454 GOLGA2Q08379 1002 aa12.83□□□□□ -0.36
SYT1-206ENST00000549454 SEC24BO95487 1268 aa12.82□□□□□ -0.36
SYT1-206ENST00000549454 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
SYT1-206ENST00000549454 RGL2O15211 777 aa12.8□□□□□ -0.36
SYT1-206ENST00000549454 COLQQ9Y215 455 aaPredicted RBP12.8□□□□□ -0.36
SYT1-206ENST00000549454 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
SYT1-206ENST00000549454 IER5LQ5T953 404 aa12.79□□□□□ -0.36
SYT1-206ENST00000549454 CABP2Q9NPB3 220 aa12.79□□□□□ -0.36
SYT1-206ENST00000549454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.78□□□□□ -0.36
SYT1-206ENST00000549454 VGFO15240 615 aaPredicted RBP12.78□□□□□ -0.36
SYT1-206ENST00000549454 ZFP91Q96JP5 570 aaPredicted RBP12.78□□□□□ -0.36
SYT1-206ENST00000549454 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.37
SYT1-206ENST00000549454 PLCG2P16885 1265 aa12.75□□□□□ -0.37
SYT1-206ENST00000549454 IRX5P78411 483 aaPredicted RBP12.73□□□□□ -0.37
SYT1-206ENST00000549454 TAOK2Q9UL54 1235 aa12.7□□□□□ -0.38
SYT1-206ENST00000549454 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
SYT1-206ENST00000549454 BCL11BQ9C0K0 894 aaPredicted RBP12.68□□□□□ -0.38
SYT1-206ENST00000549454 OCEL1Q9H607 264 aa12.68□□□□□ -0.38
SYT1-206ENST00000549454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.68□□□□□ -0.38
SYT1-206ENST00000549454 STK25O00506 426 aa12.67□□□□□ -0.38
SYT1-206ENST00000549454 EFCAB3Q8N7B9 438 aa12.67□□□□□ -0.38
SYT1-206ENST00000549454 STK24Q9Y6E0 443 aa12.67□□□□□ -0.38
SYT1-206ENST00000549454 OTUD5Q96G74 571 aa12.65□□□□□ -0.38
SYT1-206ENST00000549454 PDCD7Q8N8D1 485 aaKnown RBP12.63□□□□□ -0.39
SYT1-206ENST00000549454 SCUBE2Q9NQ36 999 aa12.6□□□□□ -0.39
SYT1-206ENST00000549454 DCAF8L2P0C7V8 631 aa12.58□□□□□ -0.4
SYT1-206ENST00000549454 MAMSTRQ6ZN01 415 aa12.58□□□□□ -0.4
SYT1-206ENST00000549454 DPY19L2Q6NUT2 758 aa12.56□□□□□ -0.4
SYT1-206ENST00000549454 PHF8Q9UPP1 1060 aa12.55□□□□□ -0.4
SYT1-206ENST00000549454 ILDR1Q86SU0 546 aaPredicted RBP12.54□□□□□ -0.4
SYT1-206ENST00000549454 CHGAP10645 457 aaKnown RBP12.53□□□□□ -0.4
SYT1-206ENST00000549454 SOX12O15370 315 aa12.52□□□□□ -0.41
SYT1-206ENST00000549454 AMER1Q5JTC6 1135 aaPredicted RBP12.52□□□□□ -0.41
SYT1-206ENST00000549454 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
SYT1-206ENST00000549454 HS6ST3Q8IZP7 471 aa12.49□□□□□ -0.41
SYT1-206ENST00000549454 L3MBTL3Q96JM7 780 aaPredicted RBP12.49□□□□□ -0.41
SYT1-206ENST00000549454 MS4A4AQ96JQ5 239 aa12.48□□□□□ -0.41
SYT1-206ENST00000549454 G3V3G9 751 aa12.47□□□□□ -0.41
SYT1-206ENST00000549454 C3orf67Q6ZVT6 689 aa12.47□□□□□ -0.41
SYT1-206ENST00000549454 MFRPQ9BY79 579 aa12.47□□□□□ -0.41
SYT1-206ENST00000549454 BOLA1Q9Y3E2 137 aa12.46□□□□□ -0.41
SYT1-206ENST00000549454 NLRP6P59044 892 aa12.45□□□□□ -0.42
SYT1-206ENST00000549454 SLAIN1Q8ND83 568 aa12.45□□□□□ -0.42
SYT1-206ENST00000549454 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.44□□□□□ -0.42
SYT1-206ENST00000549454 FBXO22Q8NEZ5 403 aa12.43□□□□□ -0.42
SYT1-206ENST00000549454 MICALL2Q8IY33 904 aa12.37□□□□□ -0.43
SYT1-206ENST00000549454 NKX1-1Q15270 411 aaPredicted RBP12.34□□□□□ -0.43
SYT1-206ENST00000549454 TMEM121BQ9BXQ6 578 aaPredicted RBP12.33□□□□□ -0.44
SYT1-206ENST00000549454 PPP1R37O75864 691 aa12.3□□□□□ -0.44
SYT1-206ENST00000549454 FAM163AQ96GL9 167 aaPredicted RBP12.29□□□□□ -0.44
SYT1-206ENST00000549454 DNAJC5Q9H3Z4 198 aa12.28□□□□□ -0.44
SYT1-206ENST00000549454 TMEM92Q6UXU6 159 aa12.25□□□□□ -0.45
SYT1-206ENST00000549454 LCE2DQ5TA82 110 aaPredicted RBP12.19□□□□□ -0.46
SYT1-206ENST00000549454 RYDENQ9NUL5 291 aaKnown RBP12.19□□□□□ -0.46
SYT1-206ENST00000549454 SNPHO15079 494 aa12.18□□□□□ -0.46
SYT1-206ENST00000549454 GTPBP6O43824 516 aaPredicted RBP12.17□□□□□ -0.46
SYT1-206ENST00000549454 ST18O60284 1047 aa12.15□□□□□ -0.46
SYT1-206ENST00000549454 BBXQ8WY36 941 aaPredicted RBP12.13□□□□□ -0.47
SYT1-206ENST00000549454 C2orf72A6NCS6 295 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms