RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 CCDC61Q9Y6R9 512 aa14.37□□□□□ -0.11
CNOT2-216ENST00000548939 LHX8Q68G74 356 aa14.33□□□□□ -0.12
CNOT2-216ENST00000548939 MS4A3Q96HJ5 214 aa14.33□□□□□ -0.12
CNOT2-216ENST00000548939 NUBP1P53384 320 aa14.29□□□□□ -0.12
CNOT2-216ENST00000548939 KIF12Q96FN5 646 aa14.28□□□□□ -0.12
CNOT2-216ENST00000548939 VASPP50552 380 aaPredicted RBP14.23□□□□□ -0.13
CNOT2-216ENST00000548939 MAP3K13O43283 966 aa14.21□□□□□ -0.13
CNOT2-216ENST00000548939 FAM212AQ96EL1 285 aa14.21□□□□□ -0.13
CNOT2-216ENST00000548939 ASTLQ6HA08 431 aaPredicted RBP14.18□□□□□ -0.14
CNOT2-216ENST00000548939 ATMINO43313 823 aaPredicted RBP14.17□□□□□ -0.14
CNOT2-216ENST00000548939 PELP1Q8IZL8 1130 aaKnown RBP14.17□□□□□ -0.14
CNOT2-216ENST00000548939 KLHL34Q8N239 644 aa14.17□□□□□ -0.14
CNOT2-216ENST00000548939 DCAF8Q5TAQ9 597 aa14.12□□□□□ -0.15
CNOT2-216ENST00000548939 TRPC6Q9Y210 931 aa14.11□□□□□ -0.15
CNOT2-216ENST00000548939 PCDHB13Q9Y5F0 798 aa14.11□□□□□ -0.15
CNOT2-216ENST00000548939 SGIP1Q9BQI5 828 aa14.1□□□□□ -0.15
CNOT2-216ENST00000548939 ATN1P54259 1190 aaPredicted RBP14.08□□□□□ -0.16
CNOT2-216ENST00000548939 SLC39A7Q92504 469 aa14.08□□□□□ -0.16
CNOT2-216ENST00000548939 BMP2KQ9NSY1 1161 aaPredicted RBP14.08□□□□□ -0.16
CNOT2-216ENST00000548939 TIE1P35590 1138 aa14.07□□□□□ -0.16
CNOT2-216ENST00000548939 METRNQ9UJH8 293 aa14.07□□□□□ -0.16
CNOT2-216ENST00000548939 C7P10643 843 aa14.06□□□□□ -0.16
CNOT2-216ENST00000548939 IFNL1Q8IU54 200 aa14.02□□□□□ -0.17
CNOT2-216ENST00000548939 POTEB2H3BUK9 544 aa14.01□□□□□ -0.17
CNOT2-216ENST00000548939 PYGBP11216 843 aa14.01□□□□□ -0.17
CNOT2-216ENST00000548939 TTLL13PA6NNM8 815 aa14□□□□□ -0.17
CNOT2-216ENST00000548939 GSE1Q14687 1217 aa13.99□□□□□ -0.17
CNOT2-216ENST00000548939 IFNLR1Q8IU57 520 aaPredicted RBP13.98□□□□□ -0.17
CNOT2-216ENST00000548939 SPOCK2Q92563 424 aa13.94□□□□□ -0.18
CNOT2-216ENST00000548939 OTUD5Q96G74 571 aa13.93□□□□□ -0.18
CNOT2-216ENST00000548939 TMEM106CQ9BVX2 250 aa13.91□□□□□ -0.18
CNOT2-216ENST00000548939 TRIM35Q9UPQ4 493 aa13.91□□□□□ -0.18
CNOT2-216ENST00000548939 PCDHB8Q9UN66 801 aa13.88□□□□□ -0.19
CNOT2-216ENST00000548939 POTEFA5A3E0 1075 aa13.85□□□□□ -0.19
CNOT2-216ENST00000548939 SEC24BO95487 1268 aa13.85□□□□□ -0.19
CNOT2-216ENST00000548939 POTEJP0CG39 1038 aa13.84□□□□□ -0.19
CNOT2-216ENST00000548939 IER5LQ5T953 404 aa13.84□□□□□ -0.19
CNOT2-216ENST00000548939 CIZ1Q9ULV3 898 aaPredicted RBP13.84□□□□□ -0.19
CNOT2-216ENST00000548939 CHRM1P11229 460 aaPredicted RBP13.83□□□□□ -0.2
CNOT2-216ENST00000548939 MAMSTRQ6ZN01 415 aa13.82□□□□□ -0.2
CNOT2-216ENST00000548939 ZNF467Q7Z7K2 595 aaPredicted RBP13.82□□□□□ -0.2
CNOT2-216ENST00000548939 COLQQ9Y215 455 aaPredicted RBP13.82□□□□□ -0.2
CNOT2-216ENST00000548939 SCUBE2Q9NQ36 999 aa13.76□□□□□ -0.21
CNOT2-216ENST00000548939 PLCG2P16885 1265 aa13.72□□□□□ -0.21
CNOT2-216ENST00000548939 PSEN1P49768 467 aa13.69□□□□□ -0.22
CNOT2-216ENST00000548939 IRX5P78411 483 aaPredicted RBP13.69□□□□□ -0.22
CNOT2-216ENST00000548939 GOLGA2Q08379 1002 aa13.66□□□□□ -0.22
CNOT2-216ENST00000548939 PDAP1Q13442 181 aaKnown RBP13.65□□□□□ -0.22
CNOT2-216ENST00000548939 TRIM41Q8WV44 630 aa13.65□□□□□ -0.22
CNOT2-216ENST00000548939 OCEL1Q9H607 264 aa13.65□□□□□ -0.22
CNOT2-216ENST00000548939 MKRN3Q13064 507 aaKnown RBP13.62□□□□□ -0.23
CNOT2-216ENST00000548939 CABP2Q9NPB3 220 aa13.52□□□□□ -0.25
CNOT2-216ENST00000548939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.259e-8■■■□□ 14.9
CNOT2-216ENST00000548939 PDCD7Q8N8D1 485 aaKnown RBP13.51□□□□□ -0.25
CNOT2-216ENST00000548939 SLAIN1Q8ND83 568 aa13.51□□□□□ -0.25
CNOT2-216ENST00000548939 FAM163AQ96GL9 167 aaPredicted RBP13.5□□□□□ -0.25
CNOT2-216ENST00000548939 POTEMA6NI47 508 aa13.47□□□□□ -0.25
CNOT2-216ENST00000548939 RIOK3O14730 519 aaKnown RBP13.46□□□□□ -0.25
CNOT2-216ENST00000548939 POTEGQ6S5H5 508 aa13.46□□□□□ -0.25
CNOT2-216ENST00000548939 L3MBTL3Q96JM7 780 aaPredicted RBP13.45□□□□□ -0.26
CNOT2-216ENST00000548939 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
CNOT2-216ENST00000548939 RNF25Q96BH1 459 aaPredicted RBP13.44□□□□□ -0.26
CNOT2-216ENST00000548939 LCE2DQ5TA82 110 aaPredicted RBP13.42□□□□□ -0.26
CNOT2-216ENST00000548939 ILDR1Q86SU0 546 aaPredicted RBP13.42□□□□□ -0.26
CNOT2-216ENST00000548939 C3orf67Q6ZVT6 689 aa13.4□□□□□ -0.26
CNOT2-216ENST00000548939 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
CNOT2-216ENST00000548939 DPY19L2Q6NUT2 758 aa13.38□□□□□ -0.27
CNOT2-216ENST00000548939 EFCAB3Q8N7B9 438 aa13.38□□□□□ -0.27
CNOT2-216ENST00000548939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.37□□□□□ -0.27
CNOT2-216ENST00000548939 ZFP91Q96JP5 570 aaPredicted RBP13.37□□□□□ -0.27
CNOT2-216ENST00000548939 G3V3G9 751 aa13.33□□□□□ -0.28
CNOT2-216ENST00000548939 ECM2O94769 699 aaPredicted RBP13.33□□□□□ -0.28
CNOT2-216ENST00000548939 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
CNOT2-216ENST00000548939 BOLA1Q9Y3E2 137 aa13.31□□□□□ -0.28
CNOT2-216ENST00000548939 SNPHO15079 494 aa13.29□□□□□ -0.28
CNOT2-216ENST00000548939 ST18O60284 1047 aa13.28□□□□□ -0.28
CNOT2-216ENST00000548939 SOX12O15370 315 aa13.27□□□□□ -0.29
CNOT2-216ENST00000548939 PKD2Q13563 968 aa13.27□□□□□ -0.29
CNOT2-216ENST00000548939 PCDH10Q9P2E7 1040 aa13.26□□□□□ -0.29
CNOT2-216ENST00000548939 PLSCR2Q9NRY7 297 aa13.25□□□□□ -0.29
CNOT2-216ENST00000548939 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
CNOT2-216ENST00000548939 PHF8Q9UPP1 1060 aa13.21□□□□□ -0.29
CNOT2-216ENST00000548939 STK24Q9Y6E0 443 aa13.21□□□□□ -0.29
CNOT2-216ENST00000548939 RGL2O15211 777 aa13.2□□□□□ -0.3
CNOT2-216ENST00000548939 TMEM121BQ9BXQ6 578 aaPredicted RBP13.2□□□□□ -0.3
CNOT2-216ENST00000548939 STK25O00506 426 aa13.19□□□□□ -0.3
CNOT2-216ENST00000548939 MS4A4AQ96JQ5 239 aa13.18□□□□□ -0.3
CNOT2-216ENST00000548939 MICALL2Q8IY33 904 aa13.15□□□□□ -0.3
CNOT2-216ENST00000548939 NLRP6P59044 892 aa13.14□□□□□ -0.31
CNOT2-216ENST00000548939 CDAN1Q8IWY9 1227 aa13.11□□□□□ -0.31
CNOT2-216ENST00000548939 MARVELD3Q96A59 401 aa13.1□□□□□ -0.31
CNOT2-216ENST00000548939 FBXO22Q8NEZ5 403 aa13.09□□□□□ -0.31
CNOT2-216ENST00000548939 MFRPQ9BY79 579 aa13.08□□□□□ -0.32
CNOT2-216ENST00000548939 HOXB3P14651 431 aaPredicted RBP13.04□□□□□ -0.32
CNOT2-216ENST00000548939 EMP3P54852 163 aa13.03□□□□□ -0.32
CNOT2-216ENST00000548939 TMEM92Q6UXU6 159 aa13.03□□□□□ -0.32
CNOT2-216ENST00000548939 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
CNOT2-216ENST00000548939 ZNF710Q8N1W2 664 aa13.01□□□□□ -0.33
CNOT2-216ENST00000548939 RIMBP2O15034 1052 aa12.95□□□□□ -0.34
CNOT2-216ENST00000548939 FAM205CA6NFA0 338 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms