RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
CNOT2-215ENST00000548863 RASEFQ8IZ41 740 aa16.31■□□□□ 0.2
CNOT2-215ENST00000548863 MS4A3Q96HJ5 214 aa16.29■□□□□ 0.2
CNOT2-215ENST00000548863 KIF12Q96FN5 646 aa16.27■□□□□ 0.2
CNOT2-215ENST00000548863 NUBP1P53384 320 aa16.24■□□□□ 0.19
CNOT2-215ENST00000548863 ASTLQ6HA08 431 aaPredicted RBP16.22■□□□□ 0.19
CNOT2-215ENST00000548863 ATMINO43313 823 aaPredicted RBP16.16■□□□□ 0.18
CNOT2-215ENST00000548863 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
CNOT2-215ENST00000548863 MAP3K13O43283 966 aa16.14■□□□□ 0.17
CNOT2-215ENST00000548863 SGIP1Q9BQI5 828 aa16.13■□□□□ 0.17
CNOT2-215ENST00000548863 FAM212AQ96EL1 285 aa16.1■□□□□ 0.17
CNOT2-215ENST00000548863 C7P10643 843 aa16.07■□□□□ 0.16
CNOT2-215ENST00000548863 VASPP50552 380 aaPredicted RBP16.06■□□□□ 0.16
CNOT2-215ENST00000548863 SLC39A7Q92504 469 aa16.06■□□□□ 0.16
CNOT2-215ENST00000548863 TIE1P35590 1138 aa16.05■□□□□ 0.16
CNOT2-215ENST00000548863 ATN1P54259 1190 aaPredicted RBP16.03■□□□□ 0.16
CNOT2-215ENST00000548863 POTEB2H3BUK9 544 aa16.02■□□□□ 0.16
CNOT2-215ENST00000548863 BMP2KQ9NSY1 1161 aaPredicted RBP16.02■□□□□ 0.16
CNOT2-215ENST00000548863 METRNQ9UJH8 293 aa16.02■□□□□ 0.16
CNOT2-215ENST00000548863 TRPC6Q9Y210 931 aa16.02■□□□□ 0.16
CNOT2-215ENST00000548863 PCDHB13Q9Y5F0 798 aa15.99■□□□□ 0.15
CNOT2-215ENST00000548863 OTUD5Q96G74 571 aa15.95■□□□□ 0.14
CNOT2-215ENST00000548863 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
CNOT2-215ENST00000548863 TTLL13PA6NNM8 815 aa15.93■□□□□ 0.14
CNOT2-215ENST00000548863 IFNL1Q8IU54 200 aa15.92■□□□□ 0.14
CNOT2-215ENST00000548863 KLHL34Q8N239 644 aa15.92■□□□□ 0.14
CNOT2-215ENST00000548863 GSE1Q14687 1217 aa15.86■□□□□ 0.13
CNOT2-215ENST00000548863 POTEJP0CG39 1038 aa15.83■□□□□ 0.12
CNOT2-215ENST00000548863 PYGBP11216 843 aa15.83■□□□□ 0.12
CNOT2-215ENST00000548863 IER5LQ5T953 404 aa15.83■□□□□ 0.12
CNOT2-215ENST00000548863 POTEFA5A3E0 1075 aa15.82■□□□□ 0.12
CNOT2-215ENST00000548863 MAMSTRQ6ZN01 415 aa15.81■□□□□ 0.12
CNOT2-215ENST00000548863 TRIM35Q9UPQ4 493 aa15.81■□□□□ 0.12
CNOT2-215ENST00000548863 IFNLR1Q8IU57 520 aaPredicted RBP15.8■□□□□ 0.12
CNOT2-215ENST00000548863 CHRM1P11229 460 aaPredicted RBP15.77■□□□□ 0.12
CNOT2-215ENST00000548863 TMEM106CQ9BVX2 250 aa15.77■□□□□ 0.12
CNOT2-215ENST00000548863 SPOCK2Q92563 424 aa15.74■□□□□ 0.11
CNOT2-215ENST00000548863 COLQQ9Y215 455 aaPredicted RBP15.74■□□□□ 0.11
CNOT2-215ENST00000548863 SEC24BO95487 1268 aa15.72■□□□□ 0.11
CNOT2-215ENST00000548863 PCDHB8Q9UN66 801 aa15.7■□□□□ 0.1
CNOT2-215ENST00000548863 ZNF467Q7Z7K2 595 aaPredicted RBP15.69■□□□□ 0.1
CNOT2-215ENST00000548863 SCUBE2Q9NQ36 999 aa15.68■□□□□ 0.1
CNOT2-215ENST00000548863 IRX5P78411 483 aaPredicted RBP15.61■□□□□ 0.09
CNOT2-215ENST00000548863 PLCG2P16885 1265 aa15.56■□□□□ 0.08
CNOT2-215ENST00000548863 CIZ1Q9ULV3 898 aaPredicted RBP15.56■□□□□ 0.08
CNOT2-215ENST00000548863 OCEL1Q9H607 264 aa15.55■□□□□ 0.08
CNOT2-215ENST00000548863 PSEN1P49768 467 aa15.5■□□□□ 0.07
CNOT2-215ENST00000548863 TRIM41Q8WV44 630 aa15.49■□□□□ 0.07
CNOT2-215ENST00000548863 PDAP1Q13442 181 aaKnown RBP15.48■□□□□ 0.07
CNOT2-215ENST00000548863 GOLGA2Q08379 1002 aa15.43■□□□□ 0.06
CNOT2-215ENST00000548863 POTEMA6NI47 508 aa15.42■□□□□ 0.06
CNOT2-215ENST00000548863 MKRN3Q13064 507 aaKnown RBP15.42■□□□□ 0.06
CNOT2-215ENST00000548863 PDCD7Q8N8D1 485 aaKnown RBP15.41■□□□□ 0.06
CNOT2-215ENST00000548863 LCE2DQ5TA82 110 aaPredicted RBP15.39■□□□□ 0.05
CNOT2-215ENST00000548863 POTEGQ6S5H5 508 aa15.39■□□□□ 0.05
CNOT2-215ENST00000548863 ILDR1Q86SU0 546 aaPredicted RBP15.38■□□□□ 0.05
CNOT2-215ENST00000548863 SLAIN1Q8ND83 568 aa15.36■□□□□ 0.05
CNOT2-215ENST00000548863 FAM163AQ96GL9 167 aaPredicted RBP15.36■□□□□ 0.05
CNOT2-215ENST00000548863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.32■□□□□ 0.04
CNOT2-215ENST00000548863 L3MBTL3Q96JM7 780 aaPredicted RBP15.3■□□□□ 0.04
CNOT2-215ENST00000548863 CABP2Q9NPB3 220 aa15.29■□□□□ 0.04
CNOT2-215ENST00000548863 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.29■□□□□ 0.04
CNOT2-215ENST00000548863 PCDH10Q9P2E7 1040 aa15.29■□□□□ 0.04
CNOT2-215ENST00000548863 RIOK3O14730 519 aaKnown RBP15.22■□□□□ 0.03
CNOT2-215ENST00000548863 RNF25Q96BH1 459 aaPredicted RBP15.21■□□□□ 0.03
CNOT2-215ENST00000548863 C3orf67Q6ZVT6 689 aa15.18■□□□□ 0.02
CNOT2-215ENST00000548863 SNPHO15079 494 aa15.17■□□□□ 0.02
CNOT2-215ENST00000548863 VGFO15240 615 aaPredicted RBP15.16■□□□□ 0.02
CNOT2-215ENST00000548863 ST18O60284 1047 aa15.16■□□□□ 0.02
CNOT2-215ENST00000548863 DPY19L2Q6NUT2 758 aa15.16■□□□□ 0.02
CNOT2-215ENST00000548863 EFCAB3Q8N7B9 438 aa15.14■□□□□ 0.01
CNOT2-215ENST00000548863 BOLA1Q9Y3E2 137 aa15.11■□□□□ 0.01
CNOT2-215ENST00000548863 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.1■□□□□ 0.01
CNOT2-215ENST00000548863 ZFP91Q96JP5 570 aaPredicted RBP15.1■□□□□ 0.01
CNOT2-215ENST00000548863 TMEM121BQ9BXQ6 578 aaPredicted RBP15.1■□□□□ 0.01
CNOT2-215ENST00000548863 PLSCR2Q9NRY7 297 aa15.1■□□□□ 0.01
CNOT2-215ENST00000548863 SOX12O15370 315 aa15.08■□□□□ 0
CNOT2-215ENST00000548863 TAOK2Q9UL54 1235 aa15.07■□□□□ 0
CNOT2-215ENST00000548863 G3V3G9 751 aa15.06■□□□□ 0
CNOT2-215ENST00000548863 PKD2Q13563 968 aa14.98□□□□□ -0.01
CNOT2-215ENST00000548863 ECM2O94769 699 aaPredicted RBP14.97□□□□□ -0.01
CNOT2-215ENST00000548863 CDAN1Q8IWY9 1227 aa14.97□□□□□ -0.01
CNOT2-215ENST00000548863 MS4A4AQ96JQ5 239 aa14.95□□□□□ -0.02
CNOT2-215ENST00000548863 BCL11BQ9C0K0 894 aaPredicted RBP14.93□□□□□ -0.02
CNOT2-215ENST00000548863 MICALL2Q8IY33 904 aa14.92□□□□□ -0.02
CNOT2-215ENST00000548863 PHF8Q9UPP1 1060 aa14.92□□□□□ -0.02
CNOT2-215ENST00000548863 NLRP6P59044 892 aa14.89□□□□□ -0.03
CNOT2-215ENST00000548863 HOXB3P14651 431 aaPredicted RBP14.87□□□□□ -0.03
CNOT2-215ENST00000548863 FBXO22Q8NEZ5 403 aa14.87□□□□□ -0.03
CNOT2-215ENST00000548863 MARVELD3Q96A59 401 aa14.87□□□□□ -0.03
CNOT2-215ENST00000548863 STK24Q9Y6E0 443 aa14.87□□□□□ -0.03
CNOT2-215ENST00000548863 STK25O00506 426 aa14.85□□□□□ -0.03
CNOT2-215ENST00000548863 RGL2O15211 777 aa14.85□□□□□ -0.03
CNOT2-215ENST00000548863 EMP3P54852 163 aa14.81□□□□□ -0.04
CNOT2-215ENST00000548863 TMEM92Q6UXU6 159 aa14.81□□□□□ -0.04
CNOT2-215ENST00000548863 MFRPQ9BY79 579 aa14.81□□□□□ -0.04
CNOT2-215ENST00000548863 DOK7Q18PE1 504 aa14.8□□□□□ -0.04
CNOT2-215ENST00000548863 HOXB1P14653 301 aaPredicted RBP14.76□□□□□ -0.05
CNOT2-215ENST00000548863 ZNF710Q8N1W2 664 aa14.75□□□□□ -0.05
CNOT2-215ENST00000548863 RIMBP2O15034 1052 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms