RNA–Protein interactions for RNA: ENST00000548670.1

PPFIA2-212, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-212ENST00000548670 MS4A3Q96HJ5 214 aa12.18□□□□□ -0.46
PPFIA2-212ENST00000548670 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
PPFIA2-212ENST00000548670 KIF12Q96FN5 646 aa12.13□□□□□ -0.47
PPFIA2-212ENST00000548670 FBXO3Q9UK99 471 aa12.13□□□□□ -0.47
PPFIA2-212ENST00000548670 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
PPFIA2-212ENST00000548670 ATMINO43313 823 aaPredicted RBP12.08□□□□□ -0.48
PPFIA2-212ENST00000548670 PELP1Q8IZL8 1130 aaKnown RBP12.08□□□□□ -0.48
PPFIA2-212ENST00000548670 MAP3K13O43283 966 aa12.06□□□□□ -0.48
PPFIA2-212ENST00000548670 NUBP1P53384 320 aa12.06□□□□□ -0.48
PPFIA2-212ENST00000548670 SLC39A7Q92504 469 aa12.05□□□□□ -0.48
PPFIA2-212ENST00000548670 C7P10643 843 aa12.04□□□□□ -0.48
PPFIA2-212ENST00000548670 FAM212AQ96EL1 285 aa12.02□□□□□ -0.49
PPFIA2-212ENST00000548670 METRNQ9UJH8 293 aa12.01□□□□□ -0.49
PPFIA2-212ENST00000548670 SGIP1Q9BQI5 828 aa12□□□□□ -0.49
PPFIA2-212ENST00000548670 TIE1P35590 1138 aa11.99□□□□□ -0.49
PPFIA2-212ENST00000548670 ATN1P54259 1190 aaPredicted RBP11.99□□□□□ -0.49
PPFIA2-212ENST00000548670 POTEB2H3BUK9 544 aa11.98□□□□□ -0.49
PPFIA2-212ENST00000548670 BMP2KQ9NSY1 1161 aaPredicted RBP11.96□□□□□ -0.49
PPFIA2-212ENST00000548670 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
PPFIA2-212ENST00000548670 OTUD5Q96G74 571 aa11.95□□□□□ -0.5
PPFIA2-212ENST00000548670 TRPC6Q9Y210 931 aa11.95□□□□□ -0.5
PPFIA2-212ENST00000548670 DCAF8Q5TAQ9 597 aa11.93□□□□□ -0.5
PPFIA2-212ENST00000548670 VASPP50552 380 aaPredicted RBP11.91□□□□□ -0.5
PPFIA2-212ENST00000548670 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
PPFIA2-212ENST00000548670 TTLL13PA6NNM8 815 aa11.89□□□□□ -0.51
PPFIA2-212ENST00000548670 MAMSTRQ6ZN01 415 aa11.88□□□□□ -0.51
PPFIA2-212ENST00000548670 IFNL1Q8IU54 200 aa11.87□□□□□ -0.51
PPFIA2-212ENST00000548670 SEC24BO95487 1268 aa11.83□□□□□ -0.52
PPFIA2-212ENST00000548670 POTEJP0CG39 1038 aa11.82□□□□□ -0.52
PPFIA2-212ENST00000548670 PYGBP11216 843 aa11.82□□□□□ -0.52
PPFIA2-212ENST00000548670 GSE1Q14687 1217 aa11.82□□□□□ -0.52
PPFIA2-212ENST00000548670 TRIM35Q9UPQ4 493 aa11.82□□□□□ -0.52
PPFIA2-212ENST00000548670 IER5LQ5T953 404 aa11.81□□□□□ -0.52
PPFIA2-212ENST00000548670 POTEFA5A3E0 1075 aa11.8□□□□□ -0.52
PPFIA2-212ENST00000548670 TMEM106CQ9BVX2 250 aa11.8□□□□□ -0.52
PPFIA2-212ENST00000548670 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
PPFIA2-212ENST00000548670 COLQQ9Y215 455 aaPredicted RBP11.76□□□□□ -0.53
PPFIA2-212ENST00000548670 PCDHB8Q9UN66 801 aa11.72□□□□□ -0.53
PPFIA2-212ENST00000548670 CHRM1P11229 460 aaPredicted RBP11.7□□□□□ -0.54
PPFIA2-212ENST00000548670 ZNF467Q7Z7K2 595 aaPredicted RBP11.7□□□□□ -0.54
PPFIA2-212ENST00000548670 SPOCK2Q92563 424 aa11.7□□□□□ -0.54
PPFIA2-212ENST00000548670 IFNLR1Q8IU57 520 aaPredicted RBP11.69□□□□□ -0.54
PPFIA2-212ENST00000548670 PLCG2P16885 1265 aa11.68□□□□□ -0.54
PPFIA2-212ENST00000548670 IRX5P78411 483 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-212ENST00000548670 OCEL1Q9H607 264 aa11.63□□□□□ -0.55
PPFIA2-212ENST00000548670 CIZ1Q9ULV3 898 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-212ENST00000548670 POTEMA6NI47 508 aa11.62□□□□□ -0.55
PPFIA2-212ENST00000548670 POTEGQ6S5H5 508 aa11.6□□□□□ -0.55
PPFIA2-212ENST00000548670 FAM163AQ96GL9 167 aaPredicted RBP11.6□□□□□ -0.55
PPFIA2-212ENST00000548670 GOLGA2Q08379 1002 aa11.59□□□□□ -0.55
PPFIA2-212ENST00000548670 PSEN1P49768 467 aa11.57□□□□□ -0.56
PPFIA2-212ENST00000548670 MKRN3Q13064 507 aaKnown RBP11.56□□□□□ -0.56
PPFIA2-212ENST00000548670 SLAIN1Q8ND83 568 aa11.55□□□□□ -0.56
PPFIA2-212ENST00000548670 PDAP1Q13442 181 aaKnown RBP11.53□□□□□ -0.56
PPFIA2-212ENST00000548670 PLSCR2Q9NRY7 297 aa11.51□□□□□ -0.57
PPFIA2-212ENST00000548670 PCDH10Q9P2E7 1040 aa11.51□□□□□ -0.57
PPFIA2-212ENST00000548670 TRIM41Q8WV44 630 aa11.5□□□□□ -0.57
PPFIA2-212ENST00000548670 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
PPFIA2-212ENST00000548670 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
PPFIA2-212ENST00000548670 L3MBTL3Q96JM7 780 aaPredicted RBP11.47□□□□□ -0.57
PPFIA2-212ENST00000548670 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.57
PPFIA2-212ENST00000548670 PDCD7Q8N8D1 485 aaKnown RBP11.46□□□□□ -0.57
PPFIA2-212ENST00000548670 CABP2Q9NPB3 220 aa11.42□□□□□ -0.58
PPFIA2-212ENST00000548670 SNPHO15079 494 aa11.4□□□□□ -0.58
PPFIA2-212ENST00000548670 C3orf67Q6ZVT6 689 aa11.4□□□□□ -0.58
PPFIA2-212ENST00000548670 ST18O60284 1047 aa11.37□□□□□ -0.59
PPFIA2-212ENST00000548670 ILDR1Q86SU0 546 aaPredicted RBP11.37□□□□□ -0.59
PPFIA2-212ENST00000548670 G3V3G9 751 aa11.34□□□□□ -0.59
PPFIA2-212ENST00000548670 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
PPFIA2-212ENST00000548670 RIOK3O14730 519 aaKnown RBP11.31□□□□□ -0.6
PPFIA2-212ENST00000548670 TMEM121BQ9BXQ6 578 aaPredicted RBP11.31□□□□□ -0.6
PPFIA2-212ENST00000548670 CDAN1Q8IWY9 1227 aa11.28□□□□□ -0.6
PPFIA2-212ENST00000548670 EFCAB3Q8N7B9 438 aa11.28□□□□□ -0.6
PPFIA2-212ENST00000548670 BOLA1Q9Y3E2 137 aa11.28□□□□□ -0.6
PPFIA2-212ENST00000548670 VGFO15240 615 aaPredicted RBP11.26□□□□□ -0.61
PPFIA2-212ENST00000548670 RNF25Q96BH1 459 aaPredicted RBP11.24□□□□□ -0.61
PPFIA2-212ENST00000548670 SOX12O15370 315 aa11.23□□□□□ -0.61
PPFIA2-212ENST00000548670 TAOK2Q9UL54 1235 aa11.23□□□□□ -0.61
PPFIA2-212ENST00000548670 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.22□□□□□ -0.61
PPFIA2-212ENST00000548670 ZFP91Q96JP5 570 aaPredicted RBP11.22□□□□□ -0.61
PPFIA2-212ENST00000548670 MARVELD3Q96A59 401 aa11.18□□□□□ -0.62
PPFIA2-212ENST00000548670 EMP3P54852 163 aa11.13□□□□□ -0.63
PPFIA2-212ENST00000548670 ECM2O94769 699 aaPredicted RBP11.12□□□□□ -0.63
PPFIA2-212ENST00000548670 PHF8Q9UPP1 1060 aa11.12□□□□□ -0.63
PPFIA2-212ENST00000548670 MICALL2Q8IY33 904 aa11.11□□□□□ -0.63
PPFIA2-212ENST00000548670 BCL11BQ9C0K0 894 aaPredicted RBP11.11□□□□□ -0.63
PPFIA2-212ENST00000548670 NLRP6P59044 892 aa11.1□□□□□ -0.63
PPFIA2-212ENST00000548670 HOXB3P14651 431 aaPredicted RBP11.09□□□□□ -0.63
PPFIA2-212ENST00000548670 DOK7Q18PE1 504 aa11.09□□□□□ -0.63
PPFIA2-212ENST00000548670 ZNF710Q8N1W2 664 aa11.09□□□□□ -0.63
PPFIA2-212ENST00000548670 MS4A4AQ96JQ5 239 aa11.09□□□□□ -0.63
PPFIA2-212ENST00000548670 STK24Q9Y6E0 443 aa11.09□□□□□ -0.63
PPFIA2-212ENST00000548670 STK25O00506 426 aa11.06□□□□□ -0.64
PPFIA2-212ENST00000548670 FAM205CA6NFA0 338 aa11.05□□□□□ -0.64
PPFIA2-212ENST00000548670 RIMBP2O15034 1052 aa11.05□□□□□ -0.64
PPFIA2-212ENST00000548670 PKD2Q13563 968 aa11.04□□□□□ -0.64
PPFIA2-212ENST00000548670 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
PPFIA2-212ENST00000548670 HS3ST6Q96QI5 342 aa11.03□□□□□ -0.64
PPFIA2-212ENST00000548670 TMEM92Q6UXU6 159 aa11.01□□□□□ -0.65
PPFIA2-212ENST00000548670 FBXO22Q8NEZ5 403 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms