RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 LHX8Q68G74 356 aa12.41□□□□□ -0.42
RPAP3-206ENST00000548296 RASEFQ8IZ41 740 aa12.4□□□□□ -0.42
RPAP3-206ENST00000548296 NUBP1P53384 320 aa12.36□□□□□ -0.43
RPAP3-206ENST00000548296 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
RPAP3-206ENST00000548296 MS4A3Q96HJ5 214 aa12.36□□□□□ -0.43
RPAP3-206ENST00000548296 FAM212AQ96EL1 285 aa12.34□□□□□ -0.43
RPAP3-206ENST00000548296 VASPP50552 380 aaPredicted RBP12.31□□□□□ -0.44
RPAP3-206ENST00000548296 ASTLQ6HA08 431 aaPredicted RBP12.29□□□□□ -0.44
RPAP3-206ENST00000548296 MAP3K13O43283 966 aa12.28□□□□□ -0.44
RPAP3-206ENST00000548296 SGIP1Q9BQI5 828 aa12.28□□□□□ -0.44
RPAP3-206ENST00000548296 KLHL34Q8N239 644 aa12.27□□□□□ -0.45
RPAP3-206ENST00000548296 ATMINO43313 823 aaPredicted RBP12.25□□□□□ -0.45
RPAP3-206ENST00000548296 DCAF8Q5TAQ9 597 aa12.24□□□□□ -0.45
RPAP3-206ENST00000548296 C7P10643 843 aa12.22□□□□□ -0.45
RPAP3-206ENST00000548296 SLC39A7Q92504 469 aa12.22□□□□□ -0.45
RPAP3-206ENST00000548296 TIE1P35590 1138 aa12.21□□□□□ -0.45
RPAP3-206ENST00000548296 PCDHB13Q9Y5F0 798 aa12.21□□□□□ -0.45
RPAP3-206ENST00000548296 PELP1Q8IZL8 1130 aaKnown RBP12.2□□□□□ -0.46
RPAP3-206ENST00000548296 GSE1Q14687 1217 aa12.17□□□□□ -0.46
RPAP3-206ENST00000548296 ATN1P54259 1190 aaPredicted RBP12.16□□□□□ -0.46
RPAP3-206ENST00000548296 BMP2KQ9NSY1 1161 aaPredicted RBP12.16□□□□□ -0.46
RPAP3-206ENST00000548296 METRNQ9UJH8 293 aa12.16□□□□□ -0.46
RPAP3-206ENST00000548296 TRPC6Q9Y210 931 aa12.12□□□□□ -0.47
RPAP3-206ENST00000548296 IFNL1Q8IU54 200 aa12.11□□□□□ -0.47
RPAP3-206ENST00000548296 TTLL13PA6NNM8 815 aa12.1□□□□□ -0.47
RPAP3-206ENST00000548296 PYGBP11216 843 aa12.1□□□□□ -0.47
RPAP3-206ENST00000548296 SPOCK2Q92563 424 aa12.09□□□□□ -0.47
RPAP3-206ENST00000548296 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
RPAP3-206ENST00000548296 POTEB2H3BUK9 544 aa12.06□□□□□ -0.48
RPAP3-206ENST00000548296 IER5LQ5T953 404 aa12.04□□□□□ -0.48
RPAP3-206ENST00000548296 MAMSTRQ6ZN01 415 aa12.04□□□□□ -0.48
RPAP3-206ENST00000548296 CHRM1P11229 460 aaPredicted RBP12.03□□□□□ -0.48
RPAP3-206ENST00000548296 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
RPAP3-206ENST00000548296 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
RPAP3-206ENST00000548296 TRIM35Q9UPQ4 493 aa12.03□□□□□ -0.48
RPAP3-206ENST00000548296 SEC24BO95487 1268 aa12.02□□□□□ -0.49
RPAP3-206ENST00000548296 ZNF467Q7Z7K2 595 aaPredicted RBP12.01□□□□□ -0.49
RPAP3-206ENST00000548296 CIZ1Q9ULV3 898 aaPredicted RBP11.97□□□□□ -0.49
RPAP3-206ENST00000548296 PCDHB8Q9UN66 801 aa11.97□□□□□ -0.49
RPAP3-206ENST00000548296 SCUBE2Q9NQ36 999 aa11.95□□□□□ -0.5
RPAP3-206ENST00000548296 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
RPAP3-206ENST00000548296 POTEJP0CG39 1038 aa11.92□□□□□ -0.5
RPAP3-206ENST00000548296 TRIM41Q8WV44 630 aa11.91□□□□□ -0.5
RPAP3-206ENST00000548296 COLQQ9Y215 455 aaPredicted RBP11.91□□□□□ -0.5
RPAP3-206ENST00000548296 PLCG2P16885 1265 aa11.89□□□□□ -0.51
RPAP3-206ENST00000548296 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
RPAP3-206ENST00000548296 OCEL1Q9H607 264 aa11.86□□□□□ -0.51
RPAP3-206ENST00000548296 PSEN1P49768 467 aa11.85□□□□□ -0.51
RPAP3-206ENST00000548296 IRX5P78411 483 aaPredicted RBP11.85□□□□□ -0.51
RPAP3-206ENST00000548296 PDAP1Q13442 181 aaKnown RBP11.84□□□□□ -0.51
RPAP3-206ENST00000548296 MKRN3Q13064 507 aaKnown RBP11.82□□□□□ -0.52
RPAP3-206ENST00000548296 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.71□□□□□ -0.53
RPAP3-206ENST00000548296 L3MBTL3Q96JM7 780 aaPredicted RBP11.7□□□□□ -0.54
RPAP3-206ENST00000548296 SLAIN1Q8ND83 568 aa11.69□□□□□ -0.54
RPAP3-206ENST00000548296 PDCD7Q8N8D1 485 aaKnown RBP11.68□□□□□ -0.54
RPAP3-206ENST00000548296 CABP2Q9NPB3 220 aa11.68□□□□□ -0.54
RPAP3-206ENST00000548296 RIOK3O14730 519 aaKnown RBP11.67□□□□□ -0.54
RPAP3-206ENST00000548296 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
RPAP3-206ENST00000548296 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.66□□□□□ -0.54
RPAP3-206ENST00000548296 POTEMA6NI47 508 aa11.65□□□□□ -0.54
RPAP3-206ENST00000548296 ILDR1Q86SU0 546 aaPredicted RBP11.65□□□□□ -0.54
RPAP3-206ENST00000548296 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
RPAP3-206ENST00000548296 VGFO15240 615 aaPredicted RBP11.63□□□□□ -0.55
RPAP3-206ENST00000548296 POTEGQ6S5H5 508 aa11.62□□□□□ -0.55
RPAP3-206ENST00000548296 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
RPAP3-206ENST00000548296 G3V3G9 751 aa11.59□□□□□ -0.55
RPAP3-206ENST00000548296 SNPHO15079 494 aa11.58□□□□□ -0.56
RPAP3-206ENST00000548296 RNF25Q96BH1 459 aaPredicted RBP11.58□□□□□ -0.56
RPAP3-206ENST00000548296 PCDH10Q9P2E7 1040 aa11.58□□□□□ -0.56
RPAP3-206ENST00000548296 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
RPAP3-206ENST00000548296 EFCAB3Q8N7B9 438 aa11.56□□□□□ -0.56
RPAP3-206ENST00000548296 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
RPAP3-206ENST00000548296 ZFP91Q96JP5 570 aaPredicted RBP11.55□□□□□ -0.56
RPAP3-206ENST00000548296 SOX12O15370 315 aa11.54□□□□□ -0.56
RPAP3-206ENST00000548296 LCE2DQ5TA82 110 aaPredicted RBP11.54□□□□□ -0.56
RPAP3-206ENST00000548296 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
RPAP3-206ENST00000548296 BOLA1Q9Y3E2 137 aa11.53□□□□□ -0.56
RPAP3-206ENST00000548296 DPY19L2Q6NUT2 758 aa11.52□□□□□ -0.57
RPAP3-206ENST00000548296 ST18O60284 1047 aa11.47□□□□□ -0.57
RPAP3-206ENST00000548296 TMEM121BQ9BXQ6 578 aaPredicted RBP11.47□□□□□ -0.57
RPAP3-206ENST00000548296 PKD2Q13563 968 aa11.46□□□□□ -0.57
RPAP3-206ENST00000548296 BCL11BQ9C0K0 894 aaPredicted RBP11.44□□□□□ -0.58
RPAP3-206ENST00000548296 STK24Q9Y6E0 443 aa11.43□□□□□ -0.58
RPAP3-206ENST00000548296 STK25O00506 426 aa11.41□□□□□ -0.58
RPAP3-206ENST00000548296 NLRP6P59044 892 aa11.41□□□□□ -0.58
RPAP3-206ENST00000548296 PHF8Q9UPP1 1060 aa11.39□□□□□ -0.59
RPAP3-206ENST00000548296 RGL2O15211 777 aa11.38□□□□□ -0.59
RPAP3-206ENST00000548296 MICALL2Q8IY33 904 aa11.37□□□□□ -0.59
RPAP3-206ENST00000548296 MS4A4AQ96JQ5 239 aa11.36□□□□□ -0.59
RPAP3-206ENST00000548296 CDAN1Q8IWY9 1227 aa11.34□□□□□ -0.59
RPAP3-206ENST00000548296 FBXO22Q8NEZ5 403 aa11.32□□□□□ -0.6
RPAP3-206ENST00000548296 DOK7Q18PE1 504 aa11.31□□□□□ -0.6
RPAP3-206ENST00000548296 ZNF710Q8N1W2 664 aa11.29□□□□□ -0.6
RPAP3-206ENST00000548296 MFRPQ9BY79 579 aa11.29□□□□□ -0.6
RPAP3-206ENST00000548296 RIMBP2O15034 1052 aa11.28□□□□□ -0.6
RPAP3-206ENST00000548296 EMP3P54852 163 aa11.28□□□□□ -0.6
RPAP3-206ENST00000548296 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
RPAP3-206ENST00000548296 HOXB3P14651 431 aaPredicted RBP11.26□□□□□ -0.61
RPAP3-206ENST00000548296 AMER1Q5JTC6 1135 aaPredicted RBP11.23□□□□□ -0.61
RPAP3-206ENST00000548296 TMEM92Q6UXU6 159 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms