RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	LHX8	Q68G74	356 aa		13.24	□□□□□ -0.29
RPAP3-205	ENST00000548211	NUBP1	P53384	320 aa		13.21	□□□□□ -0.29
RPAP3-205	ENST00000548211	FBXO3	Q9UK99	471 aa		13.2	□□□□□ -0.3
RPAP3-205	ENST00000548211	KIF12	Q96FN5	646 aa		13.19	□□□□□ -0.3
RPAP3-205	ENST00000548211	PELP1	Q8IZL8	1130 aa	Known RBP	13.17	□□□□□ -0.3
RPAP3-205	ENST00000548211	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.16	□□□□□ -0.3
RPAP3-205	ENST00000548211	MAP3K13	O43283	966 aa		13.15	□□□□□ -0.3
RPAP3-205	ENST00000548211	TRPC6	Q9Y210	931 aa		13.13	□□□□□ -0.31
RPAP3-205	ENST00000548211	VASP	P50552	380 aa	Predicted RBP	13.11	□□□□□ -0.31
RPAP3-205	ENST00000548211	ATMIN	O43313	823 aa	Predicted RBP	13.09	□□□□□ -0.31
RPAP3-205	ENST00000548211	ASTL	Q6HA08	431 aa	Predicted RBP	13.08	□□□□□ -0.32
RPAP3-205	ENST00000548211	POTEB2	H3BUK9	544 aa		13.05	□□□□□ -0.32
RPAP3-205	ENST00000548211	ATN1	P54259	1190 aa	Predicted RBP	13.04	□□□□□ -0.32
RPAP3-205	ENST00000548211	FAM212A	Q96EL1	285 aa		13.04	□□□□□ -0.32
RPAP3-205	ENST00000548211	KLHL34	Q8N239	644 aa		13.02	□□□□□ -0.33
RPAP3-205	ENST00000548211	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.02	□□□□□ -0.33
RPAP3-205	ENST00000548211	DCAF8	Q5TAQ9	597 aa		13.01	□□□□□ -0.33
RPAP3-205	ENST00000548211	PCDHB13	Q9Y5F0	798 aa		13	□□□□□ -0.33
RPAP3-205	ENST00000548211	METRN	Q9UJH8	293 aa		12.98	□□□□□ -0.33
RPAP3-205	ENST00000548211	IFNL1	Q8IU54	200 aa		12.97	□□□□□ -0.33
RPAP3-205	ENST00000548211	PYGB	P11216	843 aa		12.96	□□□□□ -0.33
RPAP3-205	ENST00000548211	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.95	□□□□□ -0.34
RPAP3-205	ENST00000548211	TIE1	P35590	1138 aa		12.94	□□□□□ -0.34
RPAP3-205	ENST00000548211	SLC39A7	Q92504	469 aa		12.94	□□□□□ -0.34
RPAP3-205	ENST00000548211	TTLL13P	A6NNM8	815 aa		12.93	□□□□□ -0.34
RPAP3-205	ENST00000548211	SGIP1	Q9BQI5	828 aa		12.93	□□□□□ -0.34
RPAP3-205	ENST00000548211	C7	P10643	843 aa		12.92	□□□□□ -0.34
RPAP3-205	ENST00000548211	OTUD5	Q96G74	571 aa		12.91	□□□□□ -0.34
RPAP3-205	ENST00000548211	POTEF	A5A3E0	1075 aa		12.89	□□□□□ -0.35
RPAP3-205	ENST00000548211	POTEJ	P0CG39	1038 aa		12.89	□□□□□ -0.35
RPAP3-205	ENST00000548211	PCDHB8	Q9UN66	801 aa		12.85	□□□□□ -0.35
RPAP3-205	ENST00000548211	TRIM35	Q9UPQ4	493 aa		12.85	□□□□□ -0.35
RPAP3-205	ENST00000548211	TMEM106C	Q9BVX2	250 aa		12.83	□□□□□ -0.36
RPAP3-205	ENST00000548211	GSE1	Q14687	1217 aa		12.82	□□□□□ -0.36
RPAP3-205	ENST00000548211	COLQ	Q9Y215	455 aa	Predicted RBP	12.82	□□□□□ -0.36
RPAP3-205	ENST00000548211	SPOCK2	Q92563	424 aa		12.81	□□□□□ -0.36
RPAP3-205	ENST00000548211	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.75	□□□□□ -0.37
RPAP3-205	ENST00000548211	SEC24B	O95487	1268 aa		12.73	□□□□□ -0.37
RPAP3-205	ENST00000548211	CHRM1	P11229	460 aa	Predicted RBP	12.72	□□□□□ -0.37
RPAP3-205	ENST00000548211	IER5L	Q5T953	404 aa		12.7	□□□□□ -0.38
RPAP3-205	ENST00000548211	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.68	□□□□□ -0.38
RPAP3-205	ENST00000548211	IRX5	P78411	483 aa	Predicted RBP	12.65	□□□□□ -0.38
RPAP3-205	ENST00000548211	MAMSTR	Q6ZN01	415 aa		12.65	□□□□□ -0.38
RPAP3-205	ENST00000548211	PSEN1	P49768	467 aa		12.62	□□□□□ -0.39
RPAP3-205	ENST00000548211	SCUBE2	Q9NQ36	999 aa		12.62	□□□□□ -0.39
RPAP3-205	ENST00000548211	PLCG2	P16885	1265 aa		12.61	□□□□□ -0.39
RPAP3-205	ENST00000548211	OCEL1	Q9H607	264 aa		12.56	□□□□□ -0.4
RPAP3-205	ENST00000548211	PDAP1	Q13442	181 aa	Known RBP	12.55	□□□□□ -0.4
RPAP3-205	ENST00000548211	GOLGA2	Q08379	1002 aa		12.5	□□□□□ -0.41
RPAP3-205	ENST00000548211	MKRN3	Q13064	507 aa	Known RBP	12.5	□□□□□ -0.41
RPAP3-205	ENST00000548211	LCE2D	Q5TA82	110 aa	Predicted RBP	12.5	□□□□□ -0.41
RPAP3-205	ENST00000548211	PDCD7	Q8N8D1	485 aa	Known RBP	12.5	□□□□□ -0.41
RPAP3-205	ENST00000548211	FAM163A	Q96GL9	167 aa	Predicted RBP	12.48	□□□□□ -0.41
RPAP3-205	ENST00000548211	CABP2	Q9NPB3	220 aa		12.48	□□□□□ -0.41
RPAP3-205	ENST00000548211	RNF25	Q96BH1	459 aa	Predicted RBP	12.47	□□□□□ -0.41
RPAP3-205	ENST00000548211	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
RPAP3-205	ENST00000548211	SLAIN1	Q8ND83	568 aa		12.46	□□□□□ -0.41
RPAP3-205	ENST00000548211	POTEM	A6NI47	508 aa		12.45	□□□□□ -0.42
RPAP3-205	ENST00000548211	TRIM41	Q8WV44	630 aa		12.45	□□□□□ -0.42
RPAP3-205	ENST00000548211	POTEG	Q6S5H5	508 aa		12.44	□□□□□ -0.42
RPAP3-205	ENST00000548211	DPY19L2	Q6NUT2	758 aa		12.43	□□□□□ -0.42
RPAP3-205	ENST00000548211	ILDR1	Q86SU0	546 aa	Predicted RBP	12.4	□□□□□ -0.42
RPAP3-205	ENST00000548211	RIOK3	O14730	519 aa	Known RBP	12.38	□□□□□ -0.43
RPAP3-205	ENST00000548211	EFCAB3	Q8N7B9	438 aa		12.37	□□□□□ -0.43
RPAP3-205	ENST00000548211	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.36	□□□□□ -0.43
RPAP3-205	ENST00000548211	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.35	□□□□□ -0.43
RPAP3-205	ENST00000548211	ZFP91	Q96JP5	570 aa	Predicted RBP	12.35	□□□□□ -0.43
RPAP3-205	ENST00000548211	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.33	□□□□□ -0.44
RPAP3-205	ENST00000548211	VGF	O15240	615 aa	Predicted RBP	12.3	□□□□□ -0.44
RPAP3-205	ENST00000548211	ST18	O60284	1047 aa		12.29	□□□□□ -0.44
RPAP3-205	ENST00000548211	PKD2	Q13563	968 aa		12.29	□□□□□ -0.44
RPAP3-205	ENST00000548211	C3orf67	Q6ZVT6	689 aa		12.29	□□□□□ -0.44
RPAP3-205	ENST00000548211	ECM2	O94769	699 aa	Predicted RBP	12.26	□□□□□ -0.45
RPAP3-205	ENST00000548211	PLSCR2	Q9NRY7	297 aa		12.25	□□□□□ -0.45
RPAP3-205	ENST00000548211	BOLA1	Q9Y3E2	137 aa		12.25	□□□□□ -0.45
RPAP3-205	ENST00000548211	RGL2	O15211	777 aa		12.22	□□□□□ -0.45
RPAP3-205	ENST00000548211	MS4A4A	Q96JQ5	239 aa		12.22	□□□□□ -0.45
RPAP3-205	ENST00000548211	PHF8	Q9UPP1	1060 aa		12.22	□□□□□ -0.45
RPAP3-205	ENST00000548211	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.21	□□□□□ -0.45
RPAP3-205	ENST00000548211		G3V3G9	751 aa		12.18	□□□□□ -0.46
RPAP3-205	ENST00000548211	SOX12	O15370	315 aa		12.18	□□□□□ -0.46
RPAP3-205	ENST00000548211	STK24	Q9Y6E0	443 aa		12.18	□□□□□ -0.46
RPAP3-205	ENST00000548211	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.17	□□□□□ -0.46
RPAP3-205	ENST00000548211	SNPH	O15079	494 aa		12.15	□□□□□ -0.46
RPAP3-205	ENST00000548211	STK25	O00506	426 aa		12.14	□□□□□ -0.47
RPAP3-205	ENST00000548211	MARVELD3	Q96A59	401 aa		12.14	□□□□□ -0.47
RPAP3-205	ENST00000548211	MICALL2	Q8IY33	904 aa		12.13	□□□□□ -0.47
RPAP3-205	ENST00000548211	PCDH10	Q9P2E7	1040 aa		12.12	□□□□□ -0.47
RPAP3-205	ENST00000548211	TMEM92	Q6UXU6	159 aa		12.11	□□□□□ -0.47
RPAP3-205	ENST00000548211	TAOK2	Q9UL54	1235 aa		12.11	□□□□□ -0.47
RPAP3-205	ENST00000548211	CDAN1	Q8IWY9	1227 aa		12.1	□□□□□ -0.47
RPAP3-205	ENST00000548211	FBXO22	Q8NEZ5	403 aa		12.1	□□□□□ -0.47
RPAP3-205	ENST00000548211	MFRP	Q9BY79	579 aa		12.09	□□□□□ -0.47
RPAP3-205	ENST00000548211	HOXB3	P14651	431 aa	Predicted RBP	12.07	□□□□□ -0.48
RPAP3-205	ENST00000548211	NLRP6	P59044	892 aa		12.07	□□□□□ -0.48
RPAP3-205	ENST00000548211	POTEB3	A0JP26	581 aa		12	□□□□□ -0.49
RPAP3-205	ENST00000548211	EMP3	P54852	163 aa		12	□□□□□ -0.49
RPAP3-205	ENST00000548211	POTEB	Q6S5H4	581 aa		12	□□□□□ -0.49
RPAP3-205	ENST00000548211	FAM205C	A6NFA0	338 aa		11.96	□□□□□ -0.49
RPAP3-205	ENST00000548211	PPP1R37	O75864	691 aa		11.94	□□□□□ -0.5

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