RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 BCANQ96GW7 911 aa15.96■□□□□ 0.15
HIF1A-205ENST00000547430 KDM2AQ9Y2K7 1162 aa15.96■□□□□ 0.15
HIF1A-205ENST00000547430 MNX1P50219 401 aaPredicted RBP15.95■□□□□ 0.14
HIF1A-205ENST00000547430 HS6ST3Q8IZP7 471 aa15.95■□□□□ 0.14
HIF1A-205ENST00000547430 DCAF8Q5TAQ9 597 aa15.91■□□□□ 0.14
HIF1A-205ENST00000547430 DNAJC5Q9H3Z4 198 aa15.89■□□□□ 0.13
HIF1A-205ENST00000547430 FAM212AQ96EL1 285 aa15.88■□□□□ 0.13
HIF1A-205ENST00000547430 TSHZ2Q9NRE2 1034 aa15.85■□□□□ 0.13
HIF1A-205ENST00000547430 RIOK3O14730 519 aaKnown RBP15.84■□□□□ 0.13
HIF1A-205ENST00000547430 TAOK2Q9UL54 1235 aa15.82■□□□□ 0.12
HIF1A-205ENST00000547430 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
HIF1A-205ENST00000547430 RASEFQ8IZ41 740 aa15.8■□□□□ 0.12
HIF1A-205ENST00000547430 CHRM1P11229 460 aaPredicted RBP15.79■□□□□ 0.12
HIF1A-205ENST00000547430 VGFO15240 615 aaPredicted RBP15.74■□□□□ 0.11
HIF1A-205ENST00000547430 NKX1-1Q15270 411 aaPredicted RBP15.72■□□□□ 0.11
HIF1A-205ENST00000547430 SGIP1Q9BQI5 828 aa15.69■□□□□ 0.1
HIF1A-205ENST00000547430 STK25O00506 426 aa15.67■□□□□ 0.1
HIF1A-205ENST00000547430 GTPBP6O43824 516 aaPredicted RBP15.64■□□□□ 0.09
HIF1A-205ENST00000547430 PYGBP11216 843 aa15.62■□□□□ 0.09
HIF1A-205ENST00000547430 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.59■□□□□ 0.09
HIF1A-205ENST00000547430 ZFP91Q96JP5 570 aaPredicted RBP15.59■□□□□ 0.09
HIF1A-205ENST00000547430 PRKCSHP14314 528 aaPredicted RBP15.57■□□□□ 0.08
HIF1A-205ENST00000547430 BCL11BQ9C0K0 894 aaPredicted RBP15.57■□□□□ 0.08
HIF1A-205ENST00000547430 CHADLQ6NUI6 762 aa15.55■□□□□ 0.08
HIF1A-205ENST00000547430 STK24Q9Y6E0 443 aa15.55■□□□□ 0.08
HIF1A-205ENST00000547430 FARP1Q9Y4F1 1045 aaPredicted RBP15.5■□□□□ 0.07
HIF1A-205ENST00000547430 RYDENQ9NUL5 291 aaKnown RBP15.48■□□□□ 0.07
HIF1A-205ENST00000547430 TSPYL2Q9H2G4 693 aaPredicted RBP15.47■□□□□ 0.07
HIF1A-205ENST00000547430 ZNF467Q7Z7K2 595 aaPredicted RBP15.45■□□□□ 0.06
HIF1A-205ENST00000547430 TPRNQ4KMQ1 711 aa15.44■□□□□ 0.06
HIF1A-205ENST00000547430 PRKAR2AP13861 404 aaKnown RBP15.39■□□□□ 0.05
HIF1A-205ENST00000547430 NBR1Q14596 966 aa15.39■□□□□ 0.05
HIF1A-205ENST00000547430 CCDC61Q9Y6R9 512 aa15.38■□□□□ 0.05
HIF1A-205ENST00000547430 FXR2P51116 673 aaKnown RBP eCLIP15.37■□□□□ 0.05
HIF1A-205ENST00000547430 PDAP1Q13442 181 aaKnown RBP15.36■□□□□ 0.05
HIF1A-205ENST00000547430 PCDHB8Q9UN66 801 aa15.32■□□□□ 0.04
HIF1A-205ENST00000547430 PCDHB13Q9Y5F0 798 aa15.32■□□□□ 0.04
HIF1A-205ENST00000547430 ZNF579Q8NAF0 562 aaKnown RBP15.31■□□□□ 0.04
HIF1A-205ENST00000547430 PSEN1P49768 467 aa15.26■□□□□ 0.03
HIF1A-205ENST00000547430 PAK3O75914 559 aaPredicted RBP15.22■□□□□ 0.03
HIF1A-205ENST00000547430 MFRPQ9BY79 579 aa15.2■□□□□ 0.02
HIF1A-205ENST00000547430 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
HIF1A-205ENST00000547430 IFNL1Q8IU54 200 aa15.18■□□□□ 0.02
HIF1A-205ENST00000547430 PIP4P2Q8N4L2 257 aa15.18■□□□□ 0.02
HIF1A-205ENST00000547430 CADPS2Q86UW7 1296 aa15.16■□□□□ 0.02
HIF1A-205ENST00000547430 KIF12Q96FN5 646 aa15.16■□□□□ 0.02
HIF1A-205ENST00000547430 MAP3K13O43283 966 aa15.15■□□□□ 0.02
HIF1A-205ENST00000547430 P3H3Q8IVL6 736 aa15.15■□□□□ 0.02
HIF1A-205ENST00000547430 FBXO22Q8NEZ5 403 aa15.08■□□□□ 0
HIF1A-205ENST00000547430 EFCAB3Q8N7B9 438 aa15.07■□□□□ 0
HIF1A-205ENST00000547430 SOX12O15370 315 aa15.06■□□□□ 0
HIF1A-205ENST00000547430 CABP2Q9NPB3 220 aa15.06■□□□□ 0
HIF1A-205ENST00000547430 WDR70Q9NW82 654 aa15.06■□□□□ 0
HIF1A-205ENST00000547430 NLRP6P59044 892 aa15.04■□□□□ -0
HIF1A-205ENST00000547430 KCNV2Q8TDN2 545 aa15.04■□□□□ -0
HIF1A-205ENST00000547430 PPP1R37O75864 691 aa15.02■□□□□ -0
HIF1A-205ENST00000547430 ZRANB1Q9UGI0 708 aa15.02■□□□□ -0
HIF1A-205ENST00000547430 CD44P16070 742 aaKnown RBP15□□□□□ -0.01
HIF1A-205ENST00000547430 PHF8Q9UPP1 1060 aa15□□□□□ -0.01
HIF1A-205ENST00000547430 PHF12Q96QT6 1004 aa14.96□□□□□ -0.01
HIF1A-205ENST00000547430 MS4A4AQ96JQ5 239 aa14.88□□□□□ -0.03
HIF1A-205ENST00000547430 ARHGEF1Q92888 912 aaKnown RBP14.86□□□□□ -0.03
HIF1A-205ENST00000547430 E2F4Q16254 413 aa14.84□□□□□ -0.03
HIF1A-205ENST00000547430 TMEM106CQ9BVX2 250 aa14.84□□□□□ -0.03
HIF1A-205ENST00000547430 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.83□□□□□ -0.04
HIF1A-205ENST00000547430 MS4A3Q96HJ5 214 aa14.83□□□□□ -0.04
HIF1A-205ENST00000547430 NCKAP5LQ9HCH0 1330 aa14.83□□□□□ -0.04
HIF1A-205ENST00000547430 C19orf67A6NJJ6 358 aa14.81□□□□□ -0.04
HIF1A-205ENST00000547430 GOLGA2Q08379 1002 aa14.81□□□□□ -0.04
HIF1A-205ENST00000547430 LMOD2Q6P5Q4 547 aa14.81□□□□□ -0.04
HIF1A-205ENST00000547430 TRPC6Q9Y210 931 aa14.81□□□□□ -0.04
HIF1A-205ENST00000547430 MFSD10Q14728 455 aa14.77□□□□□ -0.05
HIF1A-205ENST00000547430 CRISPLD2Q9H0B8 497 aa14.77□□□□□ -0.05
HIF1A-205ENST00000547430 PDE4AP27815 886 aa14.75□□□□□ -0.05
HIF1A-205ENST00000547430 MKRN3Q13064 507 aaKnown RBP14.74□□□□□ -0.05
HIF1A-205ENST00000547430 LARP6Q9BRS8 491 aaKnown RBP14.74□□□□□ -0.05
HIF1A-205ENST00000547430 TIE1P35590 1138 aa14.73□□□□□ -0.05
HIF1A-205ENST00000547430 TULP1O00294 542 aaPredicted RBP14.72□□□□□ -0.05
HIF1A-205ENST00000547430 ILDR1Q86SU0 546 aaPredicted RBP14.71□□□□□ -0.05
HIF1A-205ENST00000547430 TESPA1A2RU30 521 aaPredicted RBP14.7□□□□□ -0.06
HIF1A-205ENST00000547430 TTLL13PA6NNM8 815 aa14.69□□□□□ -0.06
HIF1A-205ENST00000547430 DDX27Q96GQ7 796 aaKnown RBP14.68□□□□□ -0.06
HIF1A-205ENST00000547430 ARIH1Q9Y4X5 557 aaPredicted RBP14.68□□□□□ -0.06
HIF1A-205ENST00000547430 SEMA3EO15041 775 aa14.67□□□□□ -0.06
HIF1A-205ENST00000547430 CAMK2BQ13554 666 aa14.65□□□□□ -0.06
HIF1A-205ENST00000547430 BMP2KQ9NSY1 1161 aaPredicted RBP14.64□□□□□ -0.07
HIF1A-205ENST00000547430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.61□□□□□ -0.07
HIF1A-205ENST00000547430 ZC3H15Q8WU90 426 aaKnown RBP14.59□□□□□ -0.07
HIF1A-205ENST00000547430 GALR2O43603 387 aaPredicted RBP14.57□□□□□ -0.08
HIF1A-205ENST00000547430 TRIM35Q9UPQ4 493 aa14.57□□□□□ -0.08
HIF1A-205ENST00000547430 GPHNQ9NQX3 736 aaPredicted RBP14.55□□□□□ -0.08
HIF1A-205ENST00000547430 TMEM132AQ24JP5 1023 aa14.54□□□□□ -0.08
HIF1A-205ENST00000547430 SMYD5Q6GMV2 418 aa14.54□□□□□ -0.08
HIF1A-205ENST00000547430 PPP1R15BQ5SWA1 713 aa14.53□□□□□ -0.08
HIF1A-205ENST00000547430 CLCN6P51797 869 aa14.52□□□□□ -0.09
HIF1A-205ENST00000547430 DPY19L2Q6NUT2 758 aa14.48□□□□□ -0.09
HIF1A-205ENST00000547430 MICALL2Q8IY33 904 aa14.47□□□□□ -0.09
HIF1A-205ENST00000547430 PDCD7Q8N8D1 485 aaKnown RBP14.47□□□□□ -0.09
HIF1A-205ENST00000547430 ZMYND10O75800 440 aa14.44□□□□□ -0.1
HIF1A-205ENST00000547430 ATN1P54259 1190 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms